A General Route to Fully Terminally tert-Butylated Linear Polyenes

Silver to Gold Metallic Luster Changes in Stimuli-Responsive Diacetylene Derivatives Uniquely Arranged within Crystals

Eye-catching metallic luster materials, especially those whose colors can be controlled by external stimuli, have many potential applications. Here, we present a silver luster material that changes color to gold upon UV irradiation. Diacetylene (DA) derivatives with stilbenes introduced via linkers at both ends (DS-DAn (n = 1-6)) exhibited significantly different metallic luster and color change behaviors depending on the linker carbon number (n). The results revealed that the stacked structure of platelet crystals consisting of DS-DA1 with the shortest linker carbon chain exhibited a silver luster and changed its appearance to gold upon UV irradiation; this was an exceptional property of this material. More importantly, we found a unique crystal structure formed by DS-DA1, where the two assembled states coexisted. Partial topochemical polymerization of DA within this unique crystal structure dramatically changed its color from silver to gold. The findings of this study not only contribute to the development of the basic science of DA polymerization but also facilitate the development of new applications of metallic luster materials due to their attractive features that are adaptable to photomask patterning and UV laser lithography.

A Peierls Transition in Long Polymethine Molecular Wires: Evolution of Molecular Geometry and Single-Molecule Conductance

Molecules capable of mediating charge transport over several nanometers with minimal decay in conductance have fundamental and technological implications. Polymethine cyanine dyes are fascinating molecular wires because up to a critical length, they have no bond-length alternation (BLA) and their electronic structure resembles a one-dimensional free-electron gas. Beyond this threshold, they undergo a symmetry-breaking Peierls transition, which increases the HOMO-LUMO gap. We have investigated cationic cyanines with central polymethine chains of 5-13 carbon atoms (Cy3⁺-Cy11⁺). The absorption spectra and crystal structures show that symmetry breaking is sensitive to the polarity of the medium and the size of the counterion. X-ray crystallography reveals that Cy9·PF₆ and Cy11·B(C₆F₅)₄ are Peierls distorted, with high BLA at one end of the π-system, away from the partially delocalized positive charge. This pattern of BLA distribution resembles that of solitons in polyacetylene. The single-molecule conductance is essentially independent of molecular length for the polymethine salts of Cy3⁺-Cy11⁺ with the large B(C₆F₅)₄^- counterion, but with the PF₆^- counterion, the conductance decreases for the longer molecules, Cy7⁺-Cy11⁺, because this smaller anion polarizes the π-system, inducing a symmetry-breaking transition. At higher bias (0.9 V), the conductance of the shorter chains, Cy3⁺-Cy7⁺, increases with length (negative attenuation factor, β = -1.6 nm^-1), but the conductance still drops in Cy9⁺ and Cy11⁺ with the small polarizing PF₆^- counteranion.

Understanding the efficiency of ionic liquids–DMSO as solvents for carbohydrates: use of solvatochromic- and related physicochemical properties

The quantification of interactions of solvatochromic probes with ionic liquids/DMSO serves as an expedient approach for predicting the solvent efficiency in dissolving carbohydrates

Existence of Two Fluorescence Bands in all- trans-Polyenes with Six and Seven Double Bonds

From the analysis of UV/vis absorption, emission, and excitation of emission spectra of all- trans-α,ω-tetra- tert-butylpolyenes with six and seven double-bonds (3,14-di( tert-butyl)-2,2,15,15-tetramethyl-3,5,7,9,11,13-hexadecahexaene (ttbP6), and 3,16-di( tert-butyl)-2,2,17,17-tetramethyl-3,5,7,9,11,13,15-octadecaheptaene (ttbP7)) it is concluded that these hydrocarbons do not exhibit dual S₁/S₂ fluorescence, as could be inferred from the work of Christensen et al. [ J. Phys. Chem. A 2008 , 112 , 12629 - 12636 ]. The spectral data for ttbP6 and ttbP7 display a unique fluorescence from their S₁ states.

Application of bacterial cytological profiling to crude natural product extracts reveals the antibacterial arsenal of Bacillus subtilis

Although most clinically used antibiotics are derived from natural products, identifying new antibacterial molecules from natural product extracts is difficult due to the complexity of these extracts and the limited tools to correlate biological activity with specific molecules. Here, we show that bacterial cytological profiling (BCP) provides a rapid method for mechanism of action determination on plates and in complex natural product extracts and for activity-guided purification. We prepared an extract from Bacillus subtilis 3610 that killed the Escherichia coli lptD mutant and used BCP to observe two types of bioactivities in the unfractionated extract: inhibition of translation and permeablization of the cytoplasmic membrane. We used BCP to guide purification of the molecules responsible for each activity, identifying the translation inhibitors bacillaene and bacillaene B (glycosylated bacillaene) and demonstrating that two molecules contribute to cell permeabilitization, the bacteriocin subtilosin and the cyclic peptide sporulation killing factor. Our results suggest that bacillaene mediates translational arrest, and show that bacillaene B has a minimum inhibitory concentration 10 × higher than unmodified bacillaene. Finally, we show that BCP can be used to screen strains on an agar plate without the need for extract preparation, greatly saving time and improving throughput. Thus, BCP simplifies the isolation of novel natural products, by identifying strains, crude extracts and fractions with interesting bioactivities even when multiple activities are present, allowing investigators to focus labor-intensive steps on those with desired activities.

The chemical behavior of terminally tert-butylated polyolefins

The chemical behavior of various oligoenes 2 has been studied. The catalytic hydrogenation of diene 3 yielded monoene 4. Triene 7 was hydrogenated to diene 8, monoene 9 and saturated hydrocarbon 10. Bromine addition to 3 and 7 yielded the dibromides 17 and 18, respectively, i.e., the oligoene system has been attacked at its terminal olefinic carbon atoms. Analogously, the higher vinylogs 19 and 20 yielded the 1,8- and 1,10-bromine adduts 23 and 24, respectively, when less than 1 equivalent of bromine was employed. Treatment of tetraene 19 with excess bromine provided tetrabromide 25. In epoxidation reactions, both with meta-chloroperbenzoic acid (MCPBA) and dimethyldioxirane (DMDO) two model oligoenes were studied: triene 7 and tetraene 19. Whereas 7 furnished the rearrangement product 31 with MCPBA, it yielded the symmetrical epoxide 32 with DMDO. Analogously, 19 was converted to mono-epoxide 33 with MCPBA and to 34 with DMDO. Diels–Alder addition of 7 with N-phenyltriazolinedione (PTAD) did not take place. Extension of the conjugated π-system to the next higher vinylog, 19, caused NPTD-addition to the symmetrical adduct 37 in good yield. Comparable results were observed on adding NPTD (equivalent amount) to pentaene 20 and hexaene 21. Using 36 in excess provided the 2:1-adduct 40 from 21 and led to a complex mixture of adducts from heptaene 22. With tetracyanoethylene (TCNE) as the dienophile, tetraolefin 19 yielded the symmetrical adduct 43, although the reaction temperature had to be increased. Pentaene 20 and hexaene 21 led to corresponding results, adducts 44 and 45 being produced in acceptable yields. With nonaene 42 and TCNE the 2:1-adduct 48 was generated according to its spectroscopic data. Exploratory photochemical studies were carried out with tetraene 19 as the model compound. On irradiation this reacted with oxygen to the stable endo-peroxide 52.

Preparation of highly hindered polyenes with tert-butyl groups in internal positions

The conjugated tetraenes 3 and 4 a-c have been prepared and shown to possess an orthogonal structure. This was not only demonstrated by their spectroscopic properties and X-ray structural analysis of solid representatives (e.g., 4 a-c) but also by the resolution of these chiral compounds by GC and HPLC chromatography using various chiral selector systems. The chemical behavior of the typical tetraene 4 a has been studied using bromination, hydrogenation, epoxidation, and photo equilibration reactions.