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Bushuev VA, Gogoleva NV, Nikolaevskii SA, Novichihin SV, Yambulatov DS, Kiskin MA, Eremenko IL. Coordination Polymer Based on a Triangular Carboxylate Core {Fe(μ 3-O)(μ-O 2CR) 6} and an Aliphatic Diamine. Molecules 2024; 29:2125. [PMID: 38731615 PMCID: PMC11085704 DOI: 10.3390/molecules29092125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 04/29/2024] [Accepted: 04/30/2024] [Indexed: 05/13/2024] Open
Abstract
Interaction of the pre-organized complex of iron(II) trimethylacetate and 1,10-phenanthroline (phen) [Fe2(piv)4(phen)2] (1) (piv = (Me)3CCO2-)) with 1,6-diaminohexane (dahx) in anhydrous acetonitrile yielded a 1D coordination polymer [Fe3O(piv)6(dahx)1.5]n (2) and an organic salt of pivalic acid (H2dahx)(piv)2 (3). The structure of the obtained compounds was determined by single-crystal X-ray diffraction analysis. The phase purity of the complexes was determined by powder X-ray diffraction analysis. According to the single-crystal X-ray analysis, coordination polymer 2 is formed due to the binding of a triangular carboxylate core {Fe3(μ3-O)(μ-piv)6} with an aliphatic diamine ligand. Thermal behavior was investigated for compounds 1 and 2 in an argon atmosphere.
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Affiliation(s)
- Vladimir A. Bushuev
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia; (V.A.B.); (N.V.G.); (S.A.N.); (M.A.K.); (I.L.E.)
- Higher School of Economics, National Research University, 101000 Moscow, Russia
| | - Natalia V. Gogoleva
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia; (V.A.B.); (N.V.G.); (S.A.N.); (M.A.K.); (I.L.E.)
| | - Stanislav A. Nikolaevskii
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia; (V.A.B.); (N.V.G.); (S.A.N.); (M.A.K.); (I.L.E.)
| | - Sergey V. Novichihin
- N. N. Semenov Institute of Chemical Physics, Russian Academy of Sciences, Kosygina Str. 4, 119991 Moscow, Russia;
| | - Dmitriy S. Yambulatov
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia; (V.A.B.); (N.V.G.); (S.A.N.); (M.A.K.); (I.L.E.)
| | - Mikhail A. Kiskin
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia; (V.A.B.); (N.V.G.); (S.A.N.); (M.A.K.); (I.L.E.)
| | - Igor L. Eremenko
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia; (V.A.B.); (N.V.G.); (S.A.N.); (M.A.K.); (I.L.E.)
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2
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Stepanenko I, Mizetskyi P, Orlowska E, Bučinský L, Zalibera M, Vénosová B, Clémancey M, Blondin G, Rapta P, Novitchi G, Schrader W, Schaniel D, Chen YS, Lutz M, Kožíšek J, Telser J, Arion VB. The Ruthenium Nitrosyl Moiety in Clusters: Trinuclear Linear μ-Hydroxido Magnesium(II)-Diruthenium(II), μ 3-Oxido Trinuclear Diiron(III)-Ruthenium(II), and Tetranuclear μ 4-Oxido Trigallium(III)-Ruthenium(II) Complexes. Inorg Chem 2022; 61:950-967. [PMID: 34962391 PMCID: PMC8767547 DOI: 10.1021/acs.inorgchem.1c03011] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Indexed: 11/28/2022]
Abstract
The ruthenium nitrosyl moiety, {RuNO}6, is important as a potential releasing agent of nitric oxide and is of inherent interest in coordination chemistry. Typically, {RuNO}6 is found in mononuclear complexes. Herein we describe the synthesis and characterization of several multimetal cluster complexes that contain this unit. Specifically, the heterotrinuclear μ3-oxido clusters [Fe2RuCl4(μ3-O)(μ-OMe)(μ-pz)2(NO)(Hpz)2] (6) and [Fe2RuCl3(μ3-O)(μ-OMe)(μ-pz)3(MeOH)(NO)(Hpz)][Fe2RuCl3(μ3-O)(μ-OMe)(μ-pz)3(DMF)(NO)(Hpz)] (7·MeOH·2H2O) and the heterotetranuclear μ4-oxido complex [Ga3RuCl3(μ4-O)(μ-OMe)3(μ-pz)4(NO)] (8) were prepared from trans-[Ru(OH)(NO)(Hpz)4]Cl2 (5), which itself was prepared via acidic hydrolysis of the linear heterotrinuclear complex {[Ru(μ-OH)(μ-pz)2(pz)(NO)(Hpz)]2Mg} (4). Complex 4 was synthesized from the mononuclear Ru complexes (H2pz)[trans-RuCl4(Hpz)2] (1), trans-[RuCl2(Hpz)4]Cl (2), and trans-[RuCl2(Hpz)4] (3). The new compounds 4-8 were all characterized by elemental analysis, ESI mass spectrometry, IR, UV-vis, and 1H NMR spectroscopy, and single-crystal X-ray diffraction, with complexes 6 and 7 being characterized also by temperature-dependent magnetic susceptibility measurements and Mössbauer spectroscopy. Magnetometry indicated a strong antiferromagnetic interaction between paramagnetic centers in 6 and 7. The ability of 4 and 6-8 to form linkage isomers and release NO upon irradiation in the solid state was investigated by IR spectroscopy. A theoretical investigation of the electronic structure of 6 by DFT and ab initio CASSCF/NEVPT2 calculations indicated a redox-noninnocent behavior of the NO ancillary ligand in 6, which was also manifested in TD-DFT calculations of its electronic absorption spectrum. The electronic structure of 6 was also studied by an X-ray charge density analysis.
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Affiliation(s)
- Iryna Stepanenko
- University
of Vienna, Institute of Inorganic Chemistry, Währinger Strasse 42, A-1090 Vienna, Austria
| | - Pavlo Mizetskyi
- University
of Vienna, Institute of Inorganic Chemistry, Währinger Strasse 42, A-1090 Vienna, Austria
| | - Ewelina Orlowska
- University
of Vienna, Institute of Inorganic Chemistry, Währinger Strasse 42, A-1090 Vienna, Austria
| | - Lukáš Bučinský
- Institute
of Physical Chemistry and Chemical Physics, Faculty of Chemical and
Food Technology, Slovak University of Technology
in Bratislava, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Michal Zalibera
- Institute
of Physical Chemistry and Chemical Physics, Faculty of Chemical and
Food Technology, Slovak University of Technology
in Bratislava, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Barbora Vénosová
- Institute
of Physical Chemistry and Chemical Physics, Faculty of Chemical and
Food Technology, Slovak University of Technology
in Bratislava, Radlinského
9, SK-81237 Bratislava, Slovak Republic
- Department
of Physics, Faculty of Science, University
of Ostrava, 30. dubna
22, 70103 Ostrava, Czech Republic
| | - Martin Clémancey
- Univ.
Grenoble Alpes, CNRS, CEA, IRIG, LCBM, F-38000 Grenoble, France
| | - Geneviève Blondin
- Univ.
Grenoble Alpes, CNRS, CEA, IRIG, LCBM, F-38000 Grenoble, France
| | - Peter Rapta
- Institute
of Physical Chemistry and Chemical Physics, Faculty of Chemical and
Food Technology, Slovak University of Technology
in Bratislava, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | | | - Wolfgang Schrader
- MPI
für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | | | - Yu-Sheng Chen
- NSF’s
ChemMATCARS, The University of Chicago, Lemont, Illinois 60439, United States
| | - Martin Lutz
- Structural
Biochemistry, Bijvoet Centre for Biomolecular Research, Utrecht University, 3584 CH Utrecht, The Netherlands
| | - Jozef Kožíšek
- Institute
of Physical Chemistry and Chemical Physics, Faculty of Chemical and
Food Technology, Slovak University of Technology
in Bratislava, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Joshua Telser
- Department
of Biological, Physical and Health Sciences, Roosevelt University, 430 South Michigan Avenue, Chicago, Illinois 60605, United
States
| | - Vladimir B. Arion
- University
of Vienna, Institute of Inorganic Chemistry, Währinger Strasse 42, A-1090 Vienna, Austria
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3
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Terlecki M, Sobczak S, Leszczyński MK, Katrusiak A, Lewiński J. Stepwise Stress-Induced Transformations of Metal-Organic Polyhedral Cluster-Based Assemblies: Where Conformational and Supramolecular Features Meet. Chemistry 2021; 27:13757-13764. [PMID: 34297436 DOI: 10.1002/chem.202101732] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2021] [Indexed: 11/10/2022]
Abstract
Understanding the factors governing the formation of supramolecular structures and phase transitions between various forms of molecular crystals is pivotal for developing dynamic, stimuli-responsive materials and polymorph-controlled syntheses. Here, we investigate the pressure-induced dynamic of both the intrinsic molecular structure and the supramolecular network of a predesigned polyhedral oxo-centered zinc cluster incorporating monoanionic N,N'-diphenylformamidinate and featuring N-bonded phenyl groups in close proximity to the primary coordination sphere. We demonstrate that the model oxo cluster is prone to undergoing pressure-induced conformational transformations of the secondary coordination sphere and simultaneous stepwise (initially every second polyhedral molecule undergoes the conformational transformations) and reversible transitions from an ambient phase α to high-pressure phases β and γ, as single-crystal-to-single-crystal events. The observed phase transitions illustrate the key role of an interplay between the low-energy conformation perturbations and cooperative intra- and intermolecular noncovalent interactions.
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Affiliation(s)
- Michał Terlecki
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664, Warsaw, Poland
| | - Szymon Sobczak
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Uniwersytetu Poznanskiego 8, 61-614, Poznań, Poland
| | - Michał K Leszczyński
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664, Warsaw, Poland.,Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Andrzej Katrusiak
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Uniwersytetu Poznanskiego 8, 61-614, Poznań, Poland
| | - Janusz Lewiński
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664, Warsaw, Poland.,Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland
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4
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Bajaj N, Bhatt H, Pandey KK, Poswal HK, Arya A, Ghosh PS, Garg N, Deo MN. Phase transition in metal–organic complex trans-PtCl2(PEt3)2 under pressure: insights into the molecular and crystal structure. CrystEngComm 2018. [DOI: 10.1039/c8ce00433a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular reorientations result in structural phase transition in trans-PtCl2(PEt3)2 under pressure, leading to a hydrogen bond assisted supramolecular architecture.
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Affiliation(s)
- Naini Bajaj
- Homi Bhabha National Institute
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
- High Pressure & Synchrotron Radiation Physics Division
| | - Himal Bhatt
- High Pressure & Synchrotron Radiation Physics Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
| | - K. K. Pandey
- High Pressure & Synchrotron Radiation Physics Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
| | - H. K. Poswal
- High Pressure & Synchrotron Radiation Physics Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
| | - A. Arya
- Materials Science Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
| | - P. S. Ghosh
- Materials Science Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
| | - N. Garg
- High Pressure & Synchrotron Radiation Physics Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
| | - M. N. Deo
- High Pressure & Synchrotron Radiation Physics Division
- Bhabha Atomic Research Centre
- Mumbai
- India 400085
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5
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Stoian SA, Peng YR, Beedle CC, Chung YJ, Lee GH, Yang EC, Hill S. Structural, Spectroscopic, and Theoretical Investigation of a T-Shaped [Fe 3(μ 3-O)] Cluster. Inorg Chem 2017; 56:10861-10874. [PMID: 28845975 DOI: 10.1021/acs.inorgchem.7b00455] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The synthesis, X-ray crystal and electronic structures of [Fe3(μ3-O)(mpmae)2(OAc)2 Cl3], 1, where mpmae-H = 2-(N-methyl-N-((pyridine-2-yl)methyl)amino)ethanol, are described. This cluster comprises three high-spin ferric ions and exhibits a T-shaped site topology. Variable-frequency electron paramagnetic resonance measurements performed on single crystals of 1 demonstrate a total spin ST = 5/2 ground state, characterized by a small, negative, and nearly axial zero-field splitting tensor D = -0.49 cm-1, E/D ≈ 0.055. Analysis of magnetic susceptibility, magnetization, and magneto-structural correlations further corroborate the presence of a sextet ground-spin state. The observed ground state originates from the strong anti-ferromagnetic interaction of two iron(III) spins, with J = 115(5) cm-1, that, in turn, are only weakly coupled to the spin of the third site, with j = 7(1) cm-1. These exchange interactions lead to a ground state with magnetic properties that are essentially entirely determined by the weakly coupled site. The contributions of the individual spins to the total ground state of the cluster were monitored using variable-field 57Fe Mössbauer spectroscopy. Field-dependent spectra reveal that, while one of the iron sites exhibits a large negative internal field, typical of ferric ions, the other two sites exhibit small, but not null, negative and positive internal fields. A theoretical analysis reveals that these small internal fields originate from the mixing of the lowest ST = 5/2 excited state into the ground state which, in turn, is induced by a minute structural distortion.
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Affiliation(s)
| | - Yi-Ru Peng
- Department of Chemistry, Fu Jen Catholic University , Hsinchuang, New Taipei City, 24205 Taiwan, Republic of China
| | | | - Yi-Jung Chung
- Department of Chemistry, Fu Jen Catholic University , Hsinchuang, New Taipei City, 24205 Taiwan, Republic of China
| | - Gene-Hsiang Lee
- Instrumentation Centre, College of Science, National Taiwan University , Taipei, 106 Taiwan, Republic of China
| | - En-Che Yang
- Department of Chemistry, Fu Jen Catholic University , Hsinchuang, New Taipei City, 24205 Taiwan, Republic of China
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6
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Haiduc I. Inverse coordination – An emerging new chemical concept. Oxygen and other chalcogens as coordination centers. Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2017.02.016] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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Madsen SR, Gunnlaugsson HP, Moggach SA, Eikeland E, Wu LC, Leupold O, Overgaard J, Iversen BB. X-Ray Diffraction and Mössbauer Spectroscopy Studies of Pressure-Induced Phase Transitions in a Mixed-Valence Trinuclear Iron Complex. Chemistry 2016; 22:9616-23. [PMID: 27245642 DOI: 10.1002/chem.201600718] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2016] [Indexed: 12/17/2022]
Abstract
The mixed-valence complex Fe3 O(cyanoacetate)6 (H2 O)3 (1) has been studied by single-crystal X-ray diffraction analysis at pressures up to 5.3(1) GPa and by (synchrotron) Mössbauer spectroscopy at pressures up to 8(1) GPa. Crystal structure refinements were possible up to 4.0(1) GPa. In this pressure range, 1 undergoes two pressure-induced phase transitions. The first phase transition at around 3 GPa is isosymmetric and involves a 60° rotation of 50 % of the cyanoacetate ligands. The second phase transition at around 4 GPa reduces the symmetry from rhombohedral to triclinic. Mössbauer spectra show that the complex becomes partially valence-trapped after the second phase transition. This sluggish pressure-induced valence-trapping is in contrast to the very abrupt valence-trapping observed when compound 1 is cooled from 130 to 120 K at ambient pressure.
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Affiliation(s)
- Solveig R Madsen
- Center for Materials Crystallography, Department of Chemistry, Aarhus University, Langelandsgade 140, 8000, Aarhus C, Denmark
| | | | - Stephen A Moggach
- University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh, EH9 3FJ, Scotland, UK
| | - Espen Eikeland
- Center for Materials Crystallography, Department of Chemistry, Aarhus University, Langelandsgade 140, 8000, Aarhus C, Denmark
| | - Lai-Chin Wu
- Center for Materials Crystallography, Department of Chemistry, Aarhus University, Langelandsgade 140, 8000, Aarhus C, Denmark
| | - Olaf Leupold
- Deutsches Elektronen Synchrotron FS-PE, Hamburg, Germany
| | - Jacob Overgaard
- Center for Materials Crystallography, Department of Chemistry, Aarhus University, Langelandsgade 140, 8000, Aarhus C, Denmark
| | - Bo B Iversen
- Center for Materials Crystallography, Department of Chemistry, Aarhus University, Langelandsgade 140, 8000, Aarhus C, Denmark.
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8
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Madsen SR, Moggach SA, Overgaard J, Brummerstedt Iversen B. Anisotropic compressibility of the coordination polymer emim[Mn(btc)]. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2016; 72:389-394. [PMID: 27240770 DOI: 10.1107/s2052520616005515] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2015] [Accepted: 04/02/2016] [Indexed: 06/05/2023]
Abstract
The effect of pressure on the crystal structure of a coordination polymer, emim[Mn(II)(btc)] (emim = 1-ethyl,3-methyl imidazolium cation, btc = 1,3,5-benzene-tricarboxylate), was investigated with single-crystal X-ray diffraction. At 4.3 GPa the unit-cell volume had decreased by 14% compared with ambient conditions. The unit-cell contraction is highly anisotropic, with the a- and b-axes decreasing by 5.5 and 9.5%, respectively, and the c-axis compressing a mere 0.25% up to 1.7 GPa followed by a 0.2% expansion between 1.7 and 4.3 GPa. The 0.2% increase in length of the c-axis in this interval happens above the quasi-hydrostatic limit of the pressure-transmitting medium and therefore it might be a consequence of strain gradients. Under ambient conditions, two MnO6 units are connected by two carboxylate ligands to form dimeric units. On increasing pressure, a non-bonded O atom from a bridging carboxylate group approaches the Mn atom, with the Mn-O distance decreasing from 2.866 (1) Å at 0.3 GPa to 2.482 (6) Å at 4.3 GPa, increasing the coordination environment of the Mn ion from six- to seven-coordinated.
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Affiliation(s)
- Solveig R Madsen
- Center for Materials Crystallography, Department of Chemistry and iNANO, DK-8000 Aarhus C, Denmark
| | - Stephen A Moggach
- School of Chemistry, University of Edinburgh, West Mains Road, Edinburgh EH9 3JJ, Scotland
| | - Jacob Overgaard
- Center for Materials Crystallography, Department of Chemistry and iNANO, DK-8000 Aarhus C, Denmark
| | - Bo Brummerstedt Iversen
- Center for Materials Crystallography, Department of Chemistry and iNANO, DK-8000 Aarhus C, Denmark
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9
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Borup MA, Blichfeld AB, Madsen SR, Iversen BB. High-pressure single crystal X-ray diffraction study of thermoelectric ZnSb and β-Zn 4Sb 3. Dalton Trans 2016; 45:15097-15103. [DOI: 10.1039/c6dt02323a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The crystal structures of thermoelectric ZnSb and Zn4Sb3 have been studied by high pressure single crystal X-ray diffraction and the pressure behavior is different from thermal response.
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Affiliation(s)
- Mette Andersen Borup
- Center for Materials Crystallography and Department of Chemistry
- Aarhus University
- DK-8000 Aarhus C
- Denmark
| | - Anders Bank Blichfeld
- Center for Materials Crystallography and Department of Chemistry
- Aarhus University
- DK-8000 Aarhus C
- Denmark
| | - Solveig Røgild Madsen
- Center for Materials Crystallography and Department of Chemistry
- Aarhus University
- DK-8000 Aarhus C
- Denmark
| | - Bo Brummerstedt Iversen
- Center for Materials Crystallography and Department of Chemistry
- Aarhus University
- DK-8000 Aarhus C
- Denmark
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10
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Tidey JP, Wong HL, Schröder M, Blake AJ. Structural chemistry of metal coordination complexes at high pressure. Coord Chem Rev 2014. [DOI: 10.1016/j.ccr.2014.04.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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11
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Madsen SR, Thomsen MK, Scheins S, Chen YS, Finkelmeier N, Stalke D, Overgaard J, Iversen BB. A structural study of a three-membered linear metal chain compound at elevated pressure. Dalton Trans 2014; 43:1313-20. [DOI: 10.1039/c3dt52035h] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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