Exploring the Conformational Space of Bridge-Substituted Dithienylcyclopentenes

Full configurational and conformational analysis of artemisinin by one-bond carbon-carbon residual dipolar couplings at natural abundance

Configurational and conformational analysis of the biologically relevant natural product artemisinin was conducted using carbon-carbon residual dipolar couplings (1DCC RDCs) at natural abundance. These RDCs were measured through the 2D-INADEQUATE NMR experiment using a sample aligned in a compressed poly (methyl methacrylate) (PMMA) gel swollen in CDCl3. Singular value decomposition (SVD) fitting analysis of all carbon-carbon bonds, 1DCC RDCs, in relation to the full configuration/conformational space (32 diastereoisomers) of artemisinin, unambiguously identified the correct configuration of artemisinin.

Extraction of pure component spectra from ex situ illumination UV/Vis and NMR spectroscopy

Obtaining understanding of a photochemical reaction relies on the observation, identification and quantification of the compounds involved. The photochemical properties of the individual components are of particular importance, and their determination, however, is not always trivial. This is also true for the quantitative measure on the ability to absorb light, the extinction coefficient εi if more than one species i is present and two or more species absorb light of the same wavelength. In this work, it is demonstrated how pure component spectra can be obtained with a simple combination of successive and repeated ex situ illumination, UV/Vis and NMR spectroscopy. From the complementary information accessible, the wavelength-dependent extinction coefficients of all species can be calculated yielding the pure component spectra. A comparison with published data shows excellent agreement and thus proves that this approach is highly reliable.

TITANIA: Model-Free Interpretation of Residual Dipolar Couplings in the Context of Organic Compounds

Residual dipolar couplings (RDCs) become increasingly important as additional NMR parameters in the structure elucidation of organic compounds but are usually used in fitting procedures to discriminate between (computed) structures that are in accordance with RDCs and others that can be ruled out. Thus, the determination of configurations requires prior structural information. The direct use of RDCs as restraints to construct structures based on RDCs has only recently begun also in organic compounds. No protocol has been published though that uses the vector and dynamics information available in multialignment data sets directly for the joint determination of conformation and configuration of organic compounds. This is proposed in the current study. We show that by employing these data, even a flat or random start structure converges into the correctly configured structure when employing multiple alignment data sets in our iterative procedure. The requirements in terms of the number of RDCs and alignment media necessary are discussed in detail.

Light-mediated chiroptical switching of an achiral foldamer host in presence of a carbohydrate guest

A photoresponsive diarylethene was incorporated in an achiral helical foldamer container. A carbohydrate guest was found to induce opposite handedness upon binding to the open and closed forms of the diarylethene-containing foldamer, thus enabling chiroptical switching of an achiral host mediated by a chiral guest.

Improving the accuracy of 1 H-19 F internuclear distance measurement using 2D 1 H-19 F HOESY

With the rise in fluorinated pharmaceuticals, it is becoming increasingly important to develop new ¹⁹ F NMR-based methods to assist in their analysis. Crucially, obtaining information regarding the conformational dynamics of a molecule in solution can aid the design of strongly binding therapeutics. Herein, we report the development of a 2D ¹ H-¹⁹ F Heteronuclear Overhauser Spectroscopy (HOESY) experiment to measure ¹ H-¹⁹ F internuclear distances, with accuracies of ~5% when compared with ¹ H-¹⁹ F internuclear distances calculated by quantum chemical methods. We demonstrate that correcting for cross-relaxation of ¹ H, using the diagonal peaks from the 2D ¹ H-¹ H Nuclear Overhauser Enhancement Spectroscopy (NOESY), is critical in obtaining accurate values for ¹ H-¹⁹ F internuclear distances. Finally, we show that by using the proposed method to measure ¹ H-¹⁹ F internuclear distances, we are able to determine the relative stereochemistry of two fluorinated pharmaceuticals.

Post-Modification of the Ethene Bridge in the Rational Design of Photochromic Diarylethenes

Fine-tuning of the molecular structure of organic bistable compounds to improve their photochromic performance or to introduce additional functions remains an important issue in the development of photoresponsive materials. Diarylethenes bearing heterocyclic moieties belong to the most intensively studied class of organic photochromes due to their excellent photochemical properties. A huge number of diarylethenes have been synthesized so far. Analysis of the literature data shows that there are very worthy examples of diarylethenes developed by the Irie and Feringa groups, which can be the common starting material for a number of diarylethenes functionalized in hetaryl moieties. We refer to these structures as photochromic diarylethene precursors. These diarylethenes have proved to be very useful in the construction of functional molecules with desired properties. On the other hand, in our groups, we have elaborated on diarylethene precursors with modifiable ethene bridges. In this review, we have collected examples of such structures and their chemical modifications, leading to the improvement or fine-tuning of photochromic switching.

Perspectives in the application of residual dipolar couplings in the structure elucidation of weakly aligned small molecules

This perspective article aims to review the general methodology in the application of residual dipolar couplings (RDCs) in the structure elucidation of small molecules and give the author's view on challenges for future applications. Recent improvements in the availability of alignment media, new pulse sequences for the measurement of couplings and improvements in the analysis software have garnered widespread interest in the technique. However, further generalization is needed in order to make RDC analysis into a truly "routine" method. Copyright © 2016 John Wiley & Sons, Ltd.

Light-induced decarboxylation in a photo-responsive iron-containing complex based on polyoxometalate and oxalato ligands

A new iron-oxalato polyoxometalate exhibits a remarkable photocoloration effect in the solid state based entirely on an intramolecular process.

A new photoresponsive molecular polyanion in which two Fe(iii) ions are simultaneously coordinated by two [A-α-PW₉O₃₄]^9– polyoxometalate units and two oxalato ligands has been obtained. When irradiated with UV light its potassium salt, 1, exhibits a remarkable photocoloration effect, attributable to the partial reduction of the POM units to give rise to a mixed-valence species. The photoinduced process is intramolecular and involves electron transfer from the oxalato ligands, which partially decompose releasing CO₂, towards the Fe(iii) and the POM. This mechanism has been confirmed by DRS, IR, XPS and Mössbauer spectroscopy, magnetism and elemental analysis. An analogous derivative of 1 containing malonato ligands does not exhibit such photoactive behaviour, which is evidence that the oxalate ligand is essential for the photoactivity of 1. To our knowledge, 1 represents the first POM-based compound in which the photocoloration effect does not require the presence of intermolecular short interactions.