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Karges J, Cohen SM. Preorganized Homochiral Pyrrole-Based Receptors That Display Enantioselective Anion Binding. European J Org Chem 2022; 2022:e202101346. [PMID: 36778753 PMCID: PMC9912926 DOI: 10.1002/ejoc.202101346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Herein, a new scaffold for anion recognition based on a tripodal tris(pyrrolamide) motif is presented. The receptors were able to bind to a variety of anions with high affinity. Using density functional theory methods, the three-dimensional geometry of the receptor-anion complex was calculated. These calculations show that the receptors bind anions via a preorganized cavity of amide and pyrrole hydrogen bond donor groups. Based on these findings, homochiral tris(pyrrolamide) receptors were prepared, which produced as much as a 1.6-fold greater affinity for (S)-(+)-mandelate over (R)-(-)-mandelate, demonstrating the ability to differentiate between these enantiomeric anions. The interaction of (S)-(+)-mandelate and (R)-(-)-mandelate within the homochiral receptor was examined by solution NMR spectroscopy and density functional theory calculations. These findings indicate that the preorganized positioning of the pyrrole groups and subsequent sterics allows to differentiate between the stereoisomeric anions.
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Affiliation(s)
- Johannes Karges
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Seth M. Cohen
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
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2
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Recognition of Chiral Carboxylates by Synthetic Receptors. Molecules 2021; 26:molecules26216417. [PMID: 34770825 PMCID: PMC8587759 DOI: 10.3390/molecules26216417] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 10/19/2021] [Accepted: 10/21/2021] [Indexed: 11/17/2022] Open
Abstract
Recognition of anionic species plays a fundamental role in many essential chemical, biological, and environmental processes. Numerous monographs and review papers on molecular recognition of anions by synthetic receptors reflect the continuing and growing interest in this area of supramolecular chemistry. However, despite the enormous progress made over the last 20 years in the design of these molecules, the design of receptors for chiral anions is much less developed. Chiral recognition is one of the most subtle types of selectivity, and it requires very precise spatial organization of the receptor framework. At the same time, this phenomenon commonly occurs in many processes present in nature, often being their fundamental step. For these reasons, research directed toward understanding the chiral anion recognition phenomenon may lead to the identification of structural patterns that enable increasingly efficient receptor design. In this review, we present the recent progress made in the area of synthetic receptors for biologically relevant chiral carboxylates.
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3
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Ikbal SA, Sakata Y, Akine S. A chiral spirobifluorene-based bis(salen) zinc(ii) receptor towards highly enantioselective binding of chiral carboxylates. Dalton Trans 2021; 50:4119-4123. [PMID: 33662079 DOI: 10.1039/d1dt00218j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
We have designed a new chiral receptor based on two salen zinc(ii) complex units connected with a spirobifluorene framework. The chiral receptor is proven to enantioselectively bind chiral carboxylate guests and the differences between the binding constants of enantiomeric guests were up to more than one order of magnitude.
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Affiliation(s)
- Sk Asif Ikbal
- Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan.
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4
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Wasiłek S, Jurczak J. The Impact of Solvent and the Receptor Structure on Chiral Recognition Using Model Acyclic Bisamides Decorated with Glucosamine Pendant Arms. J Org Chem 2020; 85:11902-11907. [PMID: 32812751 PMCID: PMC7506935 DOI: 10.1021/acs.joc.0c01693] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We investigated the influence of various factors (including solvent mixtures) on chiral recognition of chiral carboxylates, using the titration method under 1H NMR control. We found that strong binding carboxylates (geometrical matching) is not enough for the satisfactory differentiation of enantiomers. Moreover, solvent mixture studies indicate a significant influence of environment on the formation of diastereomeric complexes and variations among them. Our findings offer insights into the complementarity of chiral recognition processes.
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Affiliation(s)
- Sylwia Wasiłek
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Janusz Jurczak
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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5
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Singh A, Maikhuri VK, Verma V, Chhatwal RJ, Sharma D, Prasad AK. Synthesis and carboxylate anion binding studies on cyclic sugar-amino acid hybrids. SYNTHETIC COMMUN 2020. [DOI: 10.1080/00397911.2020.1785502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Ankita Singh
- Bioorganic Laboratory, Department of Chemistry, University of Delhi, Delhi, India
| | - Vipin K. Maikhuri
- Bioorganic Laboratory, Department of Chemistry, University of Delhi, Delhi, India
| | - Vineet Verma
- Bioorganic Laboratory, Department of Chemistry, University of Delhi, Delhi, India
| | | | - Deepti Sharma
- Sri Venkateswara College, University of Delhi, Delhi, India
| | - Ashok K. Prasad
- Bioorganic Laboratory, Department of Chemistry, University of Delhi, Delhi, India
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6
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Tyszka-Gumkowska A, Pikus G, Jurczak J. Chiral Recognition of Carboxylate Anions by ( R)-BINOL-Based Macrocyclic Receptors. Molecules 2019; 24:E2635. [PMID: 31331097 PMCID: PMC6680683 DOI: 10.3390/molecules24142635] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2019] [Revised: 07/12/2019] [Accepted: 07/18/2019] [Indexed: 01/08/2023] Open
Abstract
Three (R)-BINOL-based macrocyclic receptors obtained via double-amidation reaction were used for chiral recognition of four anions derived from α-hydroxy and α-amino acids. The structural factors of hosts and guests that affect chiral recognition processes were also investigated, indicating that the proper geometry of both receptor and guest molecules plays a crucial role in effective enantio-discrimination.
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Affiliation(s)
- Agata Tyszka-Gumkowska
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Grzegorz Pikus
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Janusz Jurczak
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.
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7
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Lv Y, Xiao C, Yang C. A pillar[5]arene-calix[4]pyrrole enantioselective receptor for mandelate anion recognition. NEW J CHEM 2018. [DOI: 10.1039/c8nj04802a] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel pillar[5]arene-calix[4]pyrrole was synthesized as a chiral receptor for mandelate anions with a maximum enantioselectivity of 2.47.
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Affiliation(s)
- Yongjun Lv
- Material Corrosion and Protection Key Laboratory of Sichuan Province
- College of Chemical Engineering
- Sichuan University of Science & Engineering
- Zigong 643000
- China
| | - Chao Xiao
- Key Laboratory of Green Chemistry & Technology of Ministry of Education
- College of Chemistry
- State Key Laboratory of Biotherapy
- and Healthy Food Evaluation Research Center
- Sichuan University
| | - Cheng Yang
- Key Laboratory of Green Chemistry & Technology of Ministry of Education
- College of Chemistry
- State Key Laboratory of Biotherapy
- and Healthy Food Evaluation Research Center
- Sichuan University
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8
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Zhang P, Ma J, Kang X, Liu H, Chen C, Zhang Z, Zhang J, Han B. Switching chirality in the assemblies of bio-based amphiphiles solely by varying their alkyl chain length. Chem Commun (Camb) 2017; 53:2162-2165. [DOI: 10.1039/c6cc10122d] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Chirality inversion in the nanotubes of bio-based amphiphiles could be realized solely by increasing the alkyl chain length.
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Affiliation(s)
- Pei Zhang
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Jun Ma
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Xinchen Kang
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Huizhen Liu
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Chunjun Chen
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Zhanrong Zhang
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Jianling Zhang
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
| | - Buxing Han
- Beijing National Laboratory for Molecular Sciences
- Key Laboratory of Colloid and Interface and Thermodynamics
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
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Pál D, Móczár I, Kormos A, Baranyai P, Huszthy P. Synthesis and enantiomeric recognition studies of optically active 5,5-dioxophenothiazine bis(urea) and bis(thiourea) derivatives. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.tetasy.2016.08.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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10
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Kinetics of reactive extraction of equol enantiomers from organic phase by hydroxypropyl-β-cyclodextrin. Sep Purif Technol 2016. [DOI: 10.1016/j.seppur.2016.06.054] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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11
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Lichosyt D, Wasiłek S, Jurczak J. Exploring the Chiral Recognition of Carboxylates by C2-Symmetric Receptors Bearing Glucosamine Pendant Arms. J Org Chem 2016; 81:7342-8. [DOI: 10.1021/acs.joc.6b00763] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Dawid Lichosyt
- Institute
of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Sylwia Wasiłek
- Institute
of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Janusz Jurczak
- Institute
of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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12
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Livendahl M, Jamroskovic J, Ivanova S, Demirel P, Sabouri N, Chorell E. Design and Synthesis of 2,2′-Diindolylmethanes to Selectively Target Certain G-Quadruplex DNA Structures. Chemistry 2016; 22:13004-9. [DOI: 10.1002/chem.201602416] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2016] [Indexed: 11/11/2022]
Affiliation(s)
| | - Jan Jamroskovic
- Department of Medical Biochemistry and Biophysics; Umeå University; 901 87 Umeå Sweden
| | | | - Peter Demirel
- Department of Chemistry; Umeå University; 901 87 Umeå Sweden
| | - Nasim Sabouri
- Department of Medical Biochemistry and Biophysics; Umeå University; 901 87 Umeå Sweden
| | - Erik Chorell
- Department of Chemistry; Umeå University; 901 87 Umeå Sweden
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13
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Ulatowski F, Jurczak J. Chiral Recognition of Carboxylates-Receptors, Analytical Tools, and More. ASIAN J ORG CHEM 2016. [DOI: 10.1002/ajoc.201600093] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Filip Ulatowski
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/50 01-224 Warsaw Poland
| | - Janusz Jurczak
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/50 01-224 Warsaw Poland
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14
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Dąbrowa K, Niedbała P, Jurczak J. Engineering Light-Mediated Bistable Azobenzene Switches Bearing Urea d-Aminoglucose Units for Chiral Discrimination of Carboxylates. J Org Chem 2016; 81:3576-84. [DOI: 10.1021/acs.joc.6b00200] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Kajetan Dąbrowa
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Patryk Niedbała
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Janusz Jurczak
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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15
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16
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Lim JYC, Marques I, Ferreira L, Félix V, Beer PD. Enhancing the enantioselective recognition and sensing of chiral anions by halogen bonding. Chem Commun (Camb) 2016; 52:5527-30. [DOI: 10.1039/c6cc01701k] [Citation(s) in RCA: 65] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Novel halogen bonding chiral (S)-1,1′-bi-2-naphthol-based receptor molecules significantly enhance enantioselective anion recognition and electrochemical sensing compared to their hydrogen bonding analogues.
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Affiliation(s)
- Jason Y. C. Lim
- Chemistry Research Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Igor Marques
- Department of Chemistry
- CICECO – Aveiro Institute of Materials
- University of Aveiro
- 3810-193 Aveiro
- Portugal
| | - Liliana Ferreira
- Department of Medical Sciences
- iBiMED – Institute of Biomedicine
- University of Aveiro
- 3810-193 Aveiro
- Portugal
| | - Vítor Félix
- Department of Chemistry
- CICECO – Aveiro Institute of Materials
- University of Aveiro
- 3810-193 Aveiro
- Portugal
| | - Paul D. Beer
- Chemistry Research Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
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