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Peng X, Li J, Dang J, Yin S, Zheng H, Wang C, Mo Y. Conformational Preference of Lithium Polysulfide Clusters Li 2S x ( x = 4-8) in Lithium-Sulfur Batteries. Inorg Chem 2024; 63:4716-4724. [PMID: 38417153 PMCID: PMC10934799 DOI: 10.1021/acs.inorgchem.3c04537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 02/09/2024] [Accepted: 02/19/2024] [Indexed: 03/01/2024]
Abstract
Structures are of fundamental importance for diverse studies of lithium polysulfide clusters, which govern the performance of lithium-sulfur batteries. The ring-like geometries were regarded as the most stable structures, but their physical origin remains elusive. In this work, we systematically explored the minimal structures of Li2Sx (x = 4-8) clusters to uncover the driving force for their conformational preferences. All low-lying isomers were generated by performing global searches using the ABCluster program, and the ionic nature of the Li···S interactions was evidenced with the energy decomposition analysis based on the block-localized wave function (BLW-ED) approach and further confirmed with the quantum theory of atoms in molecule (QTAIM). By analysis of the contributions of various energy components to the relative stability with the references of the lowest-lying isomers, the controlling factor for isomer preferences was found to be the polarization interaction. Notably, although the electrostatic interaction dominates the binding energies, it contributes favorably to the relative stabilities of most isomers. The Li+···Li+ distance is identified as the key geometrical parameter that correlates with the strength of the polarization of the Sx2- fragment imposed by the Li+ cations. Further BLW-ED analyses reveal that the cooperativity of the Li+ cations primarily determines the relative strength of the polarization.
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Affiliation(s)
- Xinru Peng
- Key
Laboratory for Macromolecular Science of Shaanxi Province, School
of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Jiayao Li
- Key
Laboratory for Macromolecular Science of Shaanxi Province, School
of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Jingshuang Dang
- Key
Laboratory for Macromolecular Science of Shaanxi Province, School
of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Shiwei Yin
- Key
Laboratory for Macromolecular Science of Shaanxi Province, School
of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Hengyan Zheng
- Key
Laboratory for Macromolecular Science of Shaanxi Province, School
of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Changwei Wang
- Key
Laboratory for Macromolecular Science of Shaanxi Province, School
of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Yirong Mo
- Department
of Nanoscience, Joint School of Nanoscience and Nanoengineering, University of North Carolina at Greensboro, Greensboro, North Carolina 27401, United States
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2
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Shaik S, Danovich D, Zare RN. Valence Bond Theory Allows a Generalized Description of Hydrogen Bonding. J Am Chem Soc 2023; 145:20132-20140. [PMID: 37664980 PMCID: PMC10510329 DOI: 10.1021/jacs.3c08196] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Indexed: 09/05/2023]
Abstract
This paper describes the nature of the hydrogen bond (HB), B:---H-A, using valence bond theory (VBT). Our analysis shows that the most important HB interactions are polarization and charge transfer, and their corresponding sum displays a pattern that is identical for a variety of energy decomposition analysis (EDA) methods. Furthermore, the sum terms obtained with the different EDA methods correlate linearly with the corresponding VB quantities. The VBT analysis demonstrates that the total covalent-ionic resonance energy (RECS) of the HB portion (B---H in B:---H-A) correlates linearly with the dissociation energy of the HB, ΔEdiss. In principle, therefore, RECS(HB) can be determined by experiment. The VBT wavefunction reveals that the contributions of ionic structures to the HB increase the positive charge on the hydrogen of the corresponding external/free O-H bonds in, for example, the water dimer compared with a free water molecule. This increases the electric field of the external O-H bonds of water clusters and contributes to bringing about catalysis of reactions by water droplets and in water-hydrophobic interfaces.
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Affiliation(s)
- Sason Shaik
- Institute
of Chemistry, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel
| | - David Danovich
- Institute
of Chemistry, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel
| | - Richard N. Zare
- Department
of Chemistry, Stanford University, Stanford, California 94305, United States
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3
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Chen L, Dang J, Du J, Wang C, Mo Y. Hydrogen and Halogen Bonding in Homogeneous External Electric Fields: Modulating the Bond Strengths. Chemistry 2021; 27:14042-14050. [PMID: 34319620 DOI: 10.1002/chem.202102284] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Indexed: 12/28/2022]
Abstract
Recent years have witnessed various fascinating phenomena arising from the interactions of noncovalent bonds with homogeneous external electric fields (EEFs). Here we performed a computational study to interpret the sensitivity of intrinsic bond strengths to EEFs in terms of steric effect and orbital interactions. The block-localized wavefunction (BLW) method, which combines the advantages of both ab initio valence bond (VB) theory and molecular orbital (MO) theory, and the subsequent energy decomposition (BLW-ED) approach were adopted. The sensitivity was monitored and analyzed using the induced energy term, which is the variation in each energy component along the EEF strength. Systems with single or multiple hydrogen (H) or halogen (X) bond(s) were also examined. It was found that the X-bond strength change to EEFs mainly stems from the covalency change, while generally the steric effect rules the response of H-bonds to EEFs. Furthermore, X-bonds are more sensitive to EEFs, with the key difference between H- and X-bonds lying in the charge transfer interaction. Since phenylboronic acid has been experimentally used as a smart linker in EEFs, switchable sensitivity was scrutinized with the example of the phenylboronic acid dimer, which exhibits two conformations with either antiparallel or parallel H-bonds, thereby, opposite or consistent responses to EEFs. Among the studied systems, the quadruple X-bonds in molecular capsules exhibit remarkable sensitivity, with its interaction energy increased by -95.2 kJ mol-1 at the EEF strength 0.005 a.u.
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Affiliation(s)
- Li Chen
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Jingshuang Dang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Juan Du
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Changwei Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience & Nanoengineering, University of North Carolina at Greensboro, Greensboro, NC 27401, USA
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Keil H, Sonnenberg K, Müller C, Herbst-Irmer R, Beckers H, Riedel S, Stalke D. Insights into the Topology and the Formation of a Genuine ppσ Bond: Experimental and Computed Electron Densities in Monoanionic Trichlorine [Cl 3 ] . Angew Chem Int Ed Engl 2021; 60:2569-2573. [PMID: 33151006 PMCID: PMC7898528 DOI: 10.1002/anie.202013727] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Indexed: 11/06/2022]
Abstract
So far, several publications have discussed the bonding concepts in polyhalides on a theoretical basis. In particular, the trichlorine monoanion is of great interest because its structure should be symmetrical and show two equidistant Cl-Cl bonds. However, apart from matrix-isolation studies, only asymmetric trichlorine anions have been reported so far. Herein, the trichlorine monoanions in 2-chloroethyltrimethylammonium trichloride [NMe3 EtCl][Cl3 ], 1, tetramethylammonium trichloride [NMe4 ][Cl3 ], 2, and tetrapropylammonium trichloride [NnPr4 ][Cl3 ], 3, are analysed. High-resolution X-ray structures and experimental charge density analyses supported by periodic quantum-chemical calculations provide insight into the influence of the crystalline environment on the structure of these [Cl3 ]- anions as well as into the progress of the bond formation between a dichlorine molecule and a Cl- anion.
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Affiliation(s)
- Helena Keil
- Georg-August-Universität Göttingen, Institut für Anorganische Chemie, Tammannstrasse 4, 37077, Göttingen, Germany
| | - Karsten Sonnenberg
- Fachbereich Biologie, Chemie, Pharmazie, Institut für Chemie und Biochemie-Anorganische Chemie, Fabeckstrasse 34-36, 14195, Berlin, Germany
| | - Carsten Müller
- Fachbereich Biologie, Chemie, Pharmazie, Institut für Chemie und Biochemie-Anorganische Chemie, Fabeckstrasse 34-36, 14195, Berlin, Germany
| | - Regine Herbst-Irmer
- Georg-August-Universität Göttingen, Institut für Anorganische Chemie, Tammannstrasse 4, 37077, Göttingen, Germany
| | - Helmut Beckers
- Fachbereich Biologie, Chemie, Pharmazie, Institut für Chemie und Biochemie-Anorganische Chemie, Fabeckstrasse 34-36, 14195, Berlin, Germany
| | - Sebastian Riedel
- Fachbereich Biologie, Chemie, Pharmazie, Institut für Chemie und Biochemie-Anorganische Chemie, Fabeckstrasse 34-36, 14195, Berlin, Germany
| | - Dietmar Stalke
- Georg-August-Universität Göttingen, Institut für Anorganische Chemie, Tammannstrasse 4, 37077, Göttingen, Germany
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Keil H, Sonnenberg K, Müller C, Herbst‐Irmer R, Beckers H, Riedel S, Stalke D. Einblicke in die Topologie und die Bildung einer echten ppσ‐Bindung: Experimentelle und berechnete Elektronendichte im monoanionischen Trichlor [Cl
3
]
−. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202013727] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Helena Keil
- Georg-August-Universität Göttingen Institut für Anorganische Chemie Tammannstraße 4 37077 Göttingen Deutschland
| | - Karsten Sonnenberg
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Fabeckstraße 34–36 14195 Berlin Deutschland
| | - Carsten Müller
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Fabeckstraße 34–36 14195 Berlin Deutschland
| | - Regine Herbst‐Irmer
- Georg-August-Universität Göttingen Institut für Anorganische Chemie Tammannstraße 4 37077 Göttingen Deutschland
| | - Helmut Beckers
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Fabeckstraße 34–36 14195 Berlin Deutschland
| | - Sebastian Riedel
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Fabeckstraße 34–36 14195 Berlin Deutschland
| | - Dietmar Stalke
- Georg-August-Universität Göttingen Institut für Anorganische Chemie Tammannstraße 4 37077 Göttingen Deutschland
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An Interacting Quantum Atoms (IQA) and Relative Energy Gradient (REG) Study of the Halogen Bond with Explicit Analysis of Electron Correlation. Molecules 2020; 25:molecules25112674. [PMID: 32526931 PMCID: PMC7321288 DOI: 10.3390/molecules25112674] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Revised: 06/03/2020] [Accepted: 06/03/2020] [Indexed: 01/18/2023] Open
Abstract
Energy profiles of seven halogen-bonded complexes were analysed with the topological energy partitioning called Interacting Quantum Atoms (IQA) at MP4(SDQ)/6-31+G(2d,2p) level of theory. Explicit interatomic electron correlation energies are included in the analysis. Four complexes combine X2 (X = Cl or F) with HCN or NH3, while the remaining three combine ClF with HCN, NH3 or N2. Each complex was systematically deformed by translating the constituent molecules along its central axis linking X and N, and reoptimising its remaining geometry. The Relative Energy Gradient (REG) method (Theor. Chem. Acc. 2017, 136, 86) then computes which IQA energies most correlate with the total energy during the process of complex formation and further compression beyond the respective equilibrium geometries. It turns out that the covalent energy (i.e., exchange) of the halogen bond, X…N, itself drives the complex formation. When the complexes are compressed from their equilibrium to shorter X…N distance then the intra-atomic energy of N is in charge. When the REG analysis is restricted to electron correlation then the interatomic correlation energy between X and N again drives the complex formation, and the complex compression is best described by the destabilisation of the through-space correlation energy between N and the "outer" halogen.
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Hydrogen vs. Halogen Bonds in 1-Halo- Closo-Carboranes. MATERIALS 2020; 13:ma13092163. [PMID: 32392865 PMCID: PMC7254210 DOI: 10.3390/ma13092163] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Revised: 04/28/2020] [Accepted: 05/01/2020] [Indexed: 12/13/2022]
Abstract
A theoretical study of the hydrogen bond (HB) and halogen bond (XB) complexes between 1-halo-closo-carboranes and hydrogen cyanide (NCH) as HB and XB probe has been carried out at the MP2 computational level. The energy results show that the HB complexes are more stable than the XBs for the same system, with the exception of the isoenergetic iodine derivatives. The analysis of the electron density with the quantum theory of atoms in molecules (QTAIM) shows the presence of a unique intermolecular bond critical point with the typical features of weak noncovalent interactions (small values of the electron density and positive Laplacian and total energy density). The natural energy decomposition analysis (NEDA) of the complexes shows that the HB and XB complexes are dominated by the charge-transfer and polarization terms, respectively. The work has been complemented with a search in the CSD database of analogous complexes and the comparison of the results, with those of the 1-halobenzene:NCH complexes showing smaller binding energies and larger intermolecular distances as compared to the 1-halo-closo-carboranes:NCH complexes.
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8
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Sonnenberg K, Mann L, Redeker FA, Schmidt B, Riedel S. Polyhalogen and Polyinterhalogen Anions from Fluorine to Iodine. Angew Chem Int Ed Engl 2020; 59:5464-5493. [DOI: 10.1002/anie.201903197] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Revised: 05/14/2019] [Indexed: 11/05/2022]
Affiliation(s)
- Karsten Sonnenberg
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie—Anorganische Chemie Freie Universität Berlin Fabeckstr. 34/36 14195 Berlin Germany
| | - Lisa Mann
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie—Anorganische Chemie Freie Universität Berlin Fabeckstr. 34/36 14195 Berlin Germany
| | - Frenio A. Redeker
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie—Anorganische Chemie Freie Universität Berlin Fabeckstr. 34/36 14195 Berlin Germany
| | - Benjamin Schmidt
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie—Anorganische Chemie Freie Universität Berlin Fabeckstr. 34/36 14195 Berlin Germany
| | - Sebastian Riedel
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie—Anorganische Chemie Freie Universität Berlin Fabeckstr. 34/36 14195 Berlin Germany
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9
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Sonnenberg K, Mann L, Redeker FA, Schmidt B, Riedel S. Polyhalogen‐ und Polyinterhalogen‐Anionen von Fluor bis Iod. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201903197] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Karsten Sonnenberg
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Freie Universität Berlin Fabeckstraße 34/36 14195 Berlin Deutschland
| | - Lisa Mann
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Freie Universität Berlin Fabeckstraße 34/36 14195 Berlin Deutschland
| | - Frenio A. Redeker
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Freie Universität Berlin Fabeckstraße 34/36 14195 Berlin Deutschland
| | - Benjamin Schmidt
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Freie Universität Berlin Fabeckstraße 34/36 14195 Berlin Deutschland
| | - Sebastian Riedel
- Fachbereich Biologie, Chemie, Pharmazie Institut für Chemie und Biochemie – Anorganische Chemie Freie Universität Berlin Fabeckstraße 34/36 14195 Berlin Deutschland
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10
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Vologzhanina AV, Buikin PA, Korlyukov AA. Peculiarities of Br⋯Br bonding in crystal structures of polybromides and bromine solvates. CrystEngComm 2020. [DOI: 10.1039/d0ce00288g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Analysis of supramolecular associates formed by Br⋯Br interactions in crystals of 204 polybromide and bromine-containing compounds has been carried out.
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Affiliation(s)
- Anna V. Vologzhanina
- A.N. Nesmeyanov Institute of Organoelement Compounds RAS
- 119991 Moscow
- Russian Federation
| | - Petr A. Buikin
- A.N. Nesmeyanov Institute of Organoelement Compounds RAS
- 119991 Moscow
- Russian Federation
- D.M. Mendeleev University of Chemical Technology of Russia
- 125047 Moscow
| | - Alexander A. Korlyukov
- A.N. Nesmeyanov Institute of Organoelement Compounds RAS
- 119991 Moscow
- Russian Federation
- D.M. Mendeleev University of Chemical Technology of Russia
- 125047 Moscow
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Wang C, Danovich D, Chen H, Shaik S. Oriented External Electric Fields: Tweezers and Catalysts for Reactivity in Halogen-Bond Complexes. J Am Chem Soc 2019; 141:7122-7136. [PMID: 30945542 DOI: 10.1021/jacs.9b02174] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
This theoretical study establishes ways of controlling and enabling an uncommon chemical reaction, the displacement reaction, B:---(X-Y) → (B-X)+ + :Y-, which is nascent from a B:---(X-Y) halogen bond (XB) by nucleophilic attack of the base, B:, on the halogen, X. In most of the 14 cases examined, these reactions possess high barriers either in the gas phase (where the X-Y bond dissociates to radicals) or in solvents such as CH2Cl2 and CH3CN (which lead to endothermic processes). Thus, generally, the XB species are trapped in deep minima, and their reactions are not allowed without catalysis. However, when an oriented-external electric field (OEEF) is directed along the B---X---Y reaction axis, the field acts as electric tweezers that orient the XB along the field's axis, and intensely catalyze the process, by tens of kcal/mol, thus rendering the reaction allowed. Flipping the OEEF along the reaction axis inhibits the reaction and weakens the interaction of the XB. Furthermore, at a critical OEEF, each XB undergoes spontaneous and barrier-free reaction. As such, OEEF achieves quite tight control of the structure and reactivity of XB species. Valence bond modeling is used to elucidate the means whereby OEEFs exert their control.
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Affiliation(s)
- Chao Wang
- Institute of Chemistry , The Hebrew University of Jerusalem , Jerusalem 9190407 , Israel.,Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Photochemistry, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry , Chinese Academy of Sciences , Beijing 100190 , P. R. China
| | - David Danovich
- Institute of Chemistry , The Hebrew University of Jerusalem , Jerusalem 9190407 , Israel
| | - Hui Chen
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Photochemistry, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry , Chinese Academy of Sciences , Beijing 100190 , P. R. China
| | - Sason Shaik
- Institute of Chemistry , The Hebrew University of Jerusalem , Jerusalem 9190407 , Israel
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Preise der israelischen chemischen Gesellschaft: Y. Apeloig, S. Shaik, J. M. L. Martin, D. Meyerstein, S. Ruthstein und M. E. van der Boom / NAS Award in Chemical Sciences: J. A. Doudna / Remsen Award und Ralph N. Adams Award: C. A. Mirkin. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201803236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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13
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Israel Chemical Society Prizes: Y. Apeloig, S. Shaik, J. M. L. Martin, D. Meyerstein, S. Ruthstein, and M. E. van der Boom / NAS Award in Chemical Sciences: J. A. Doudna / Remsen Award and Ralph N. Adams Award: C. A. Mirkin. Angew Chem Int Ed Engl 2018; 57:4833-4834. [DOI: 10.1002/anie.201803236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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