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Oliphant KD, Fettig RR, Snoozy J, Mendel RR, Warnhoff K. Obtaining the necessary molybdenum cofactor for sulfite oxidase activity in the nematode Caenorhabditis elegans surprisingly involves a dietary source. J Biol Chem 2022; 299:102736. [PMID: 36423681 PMCID: PMC9793310 DOI: 10.1016/j.jbc.2022.102736] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Revised: 11/17/2022] [Accepted: 11/18/2022] [Indexed: 11/23/2022] Open
Abstract
Molybdenum cofactor (Moco) is a prosthetic group necessary for the activity of four unique enzymes, including the essential sulfite oxidase (SUOX-1). Moco is required for life; humans with inactivating mutations in the genes encoding Moco-biosynthetic enzymes display Moco deficiency, a rare and lethal inborn error of metabolism. Despite its importance to human health, little is known about how Moco moves among and between cells, tissues, and organisms. The prevailing view is that cells that require Moco must synthesize Moco de novo. Although, the nematode Caenorhabditis elegans appears to be an exception to this rule and has emerged as a valuable system for understanding fundamental Moco biology. C. elegans has the seemingly unique capacity to both synthesize its own Moco as well as acquire Moco from its microbial diet. However, the relative contribution of Moco from the diet or endogenous synthesis has not been rigorously evaluated or quantified biochemically. We genetically removed dietary or endogenous Moco sources in C. elegans and biochemically determined their impact on animal Moco content and SUOX-1 activity. We demonstrate that dietary Moco deficiency dramatically reduces both animal Moco content and SUOX-1 activity. Furthermore, these biochemical deficiencies have physiological consequences; we show that dietary Moco deficiency alone causes sensitivity to sulfite, the toxic substrate of SUOX-1. Altogether, this work establishes the biochemical consequences of depleting dietary Moco or endogenous Moco synthesis in C. elegans and quantifies the surprising contribution of the diet to maintaining Moco homeostasis in C. elegans.
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Affiliation(s)
- Kevin D. Oliphant
- Department of Plant Biology, Braunschweig University of Technology, Braunschweig, Germany
| | - Robin R. Fettig
- Pediatrics and Rare Diseases Group, Sanford Research, Sioux Falls, South Dakota, USA,Department of Basic Biomedical Sciences, Sanford School of Medicine, University of South Dakota, Vermillion, South Dakota, USA
| | - Jennifer Snoozy
- Pediatrics and Rare Diseases Group, Sanford Research, Sioux Falls, South Dakota, USA
| | - Ralf R. Mendel
- Department of Plant Biology, Braunschweig University of Technology, Braunschweig, Germany
| | - Kurt Warnhoff
- Pediatrics and Rare Diseases Group, Sanford Research, Sioux Falls, South Dakota, USA,Department of Pediatrics, Sanford School of Medicine, University of South Dakota, Sioux Falls, South Dakota, USA,For correspondence: Kurt Warnhoff
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Colston KJ, Basu P. Synthesis, Redox and Spectroscopic Properties of Pterin of Molybdenum Cofactors. Molecules 2022; 27:3324. [PMID: 35630801 PMCID: PMC9146068 DOI: 10.3390/molecules27103324] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Revised: 05/18/2022] [Accepted: 05/19/2022] [Indexed: 12/10/2022] Open
Abstract
Pterins are bicyclic heterocycles that are found widely across Nature and are involved in a variety of biological functions. Notably, pterins are found at the core of molybdenum cofactor (Moco) containing enzymes in the molybdopterin (MPT) ligand that coordinates molybdenum and facilitates cofactor activity. Pterins are diverse and can be widely functionalized to tune their properties. Herein, the general methods of synthesis, redox and spectroscopic properties of pterin are discussed to provide more insight into pterin chemistry and their importance to biological systems.
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Affiliation(s)
| | - Partha Basu
- Department of Chemistry and Chemical Biology, Indiana University-Purdue University Indianapolis, Indianapolis, IN 46202, USA;
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Hercher T, Krausze J, Yang J, Kirk M, Kruse T. Identification and characterisation of the Volvox carteri Moco carrier protein. Biosci Rep 2020; 40:BSR20202351. [PMID: 33084886 PMCID: PMC7687042 DOI: 10.1042/bsr20202351] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 10/08/2020] [Accepted: 10/13/2020] [Indexed: 11/23/2022] Open
Abstract
The molybdenum cofactor (Moco) is a redox active prosthetic group found in the active site of Moco-dependent enzymes (Mo-enzymes). As Moco and its intermediates are highly sensitive towards oxidative damage, these are believed to be permanently protein bound during synthesis and upon maturation. As a major component of the plant Moco transfer and storage system, proteins have been identified that are capable of Moco binding and release but do not possess Moco-dependent enzymatic activities. The first protein found to possess these properties was the Moco carrier protein (MCP) from the green alga Chlamydomonas reinhardtii. Here, we describe the identification and biochemical characterisation of the Volvox carteri (V. carteri) MCP and, for the first time, employ a comparative analysis to elucidate the principles behind MCP Moco binding. Doing so identified a sequence region of low homology amongst the existing MCPs, which we showed to be essential for Moco binding to V. carteri MCP.
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Affiliation(s)
- Thomas W. Hercher
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Joern Krausze
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Jing Yang
- Department of Chemistry and Chemical Biology, The University of New Mexico, MSC03 2060, 1 University of New Mexico, Albuquerque, NM 87131-0001, U.S.A
| | - Martin L. Kirk
- Department of Chemistry and Chemical Biology, The University of New Mexico, MSC03 2060, 1 University of New Mexico, Albuquerque, NM 87131-0001, U.S.A
| | - Tobias Kruse
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
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Krausze J, Hercher TW, Archna A, Kruse T. The structure of the Moco carrier protein from Rippkaea orientalis. Acta Crystallogr F Struct Biol Commun 2020; 76:453-463. [PMID: 32880594 PMCID: PMC7470044 DOI: 10.1107/s2053230x20011073] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Accepted: 08/11/2020] [Indexed: 12/28/2022] Open
Abstract
The molybdenum cofactor (Moco) is the prosthetic group of all molybdenum-dependent enzymes except for nitrogenase. The multistep biosynthesis pathway of Moco and its function in molybdenum-dependent enzymes are already well understood. The mechanisms of Moco transfer, storage and insertion, on the other hand, are not. In the cell, Moco is usually not found in its free form and remains bound to proteins because of its sensitivity to oxidation. The green alga Chlamydomonas reinhardtii harbors a Moco carrier protein (MCP) that binds and protects Moco but is devoid of enzymatic function. It has been speculated that this MCP acts as a means of Moco storage and transport. Here, the search for potential MCPs has been extended to the prokaryotes, and many MCPs were found in cyanobacteria. A putative MCP from Rippkaea orientalis (RoMCP) was selected for recombinant production, crystallization and structure determination. RoMCP has a Rossmann-fold topology that is characteristic of nucleotide-binding proteins and a homotetrameric quaternary structure similar to that of the MCP from C. reinhardtii. In each protomer, a positively charged crevice was identified that accommodates up to three chloride ions, hinting at a potential Moco-binding site. Computational docking experiments supported this notion and gave an impression of the RoMCP-Moco complex.
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Affiliation(s)
- Joern Krausze
- Institute of Plant Biology, TU Braunschweig, 38106 Braunschweig, Germany
| | - Thomas W. Hercher
- Institute of Plant Biology, TU Braunschweig, 38106 Braunschweig, Germany
| | - Archna Archna
- Institute of Plant Biology, TU Braunschweig, 38106 Braunschweig, Germany
| | - Tobias Kruse
- Institute of Plant Biology, TU Braunschweig, 38106 Braunschweig, Germany
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Hercher TW, Krausze J, Hoffmeister S, Zwerschke D, Lindel T, Blankenfeldt W, Mendel RR, Kruse T. Insights into the Cnx1E catalyzed MPT-AMP hydrolysis. Biosci Rep 2020; 40:BSR20191806. [PMID: 31860061 PMCID: PMC6954367 DOI: 10.1042/bsr20191806] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2019] [Revised: 12/17/2019] [Accepted: 12/19/2019] [Indexed: 11/23/2022] Open
Abstract
Molybdenum insertases (Mo-insertases) catalyze the final step of molybdenum cofactor (Moco) biosynthesis, an evolutionary old and highly conserved multi-step pathway. In the first step of the pathway, GTP serves as substrate for the formation of cyclic pyranopterin monophosphate, which is subsequently converted into molybdopterin (MPT) in the second pathway step. In the following synthesis steps, MPT is adenylated yielding MPT-AMP that is subsequently used as substrate for enzyme catalyzed molybdate insertion. Molybdate insertion and MPT-AMP hydrolysis are catalyzed by the Mo-insertase E-domain. Earlier work reported a highly conserved aspartate residue to be essential for Mo-insertase functionality. In this work, we confirmed the mechanistic relevance of this residue for the Arabidopsis thaliana Mo-insertase Cnx1E. We found that the conservative substitution of Cnx1E residue Asp274 by Glu (D274E) leads to an arrest of MPT-AMP hydrolysis and hence to the accumulation of MPT-AMP. We further showed that the MPT-AMP accumulation goes in hand with the accumulation of molybdate. By crystallization and structure determination of the Cnx1E variant D274E, we identified the potential reason for the missing hydrolysis activity in the disorder of the region spanning amino acids 269 to 274. We reasoned that this is caused by the inability of a glutamate in position 274 to coordinate the octahedral Mg2+-water complex in the Cnx1E active site.
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Affiliation(s)
- Thomas W. Hercher
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Joern Krausze
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Sven Hoffmeister
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Dagmar Zwerschke
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Thomas Lindel
- TU Braunschweig, Institute of Organic Chemistry, Hagenring 30, 38106 Braunschweig, Germany
| | - Wulf Blankenfeldt
- Structure and Function of Proteins, Helmholtz Centre for Infection Research, Inhoffenstrasse 7, 38124 Braunschweig, Germany
- TU Braunschweig, Department for Biotechnology, Institute of Biochemistry, Biotechnology and Bioinformatics, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Ralf R. Mendel
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
| | - Tobias Kruse
- TU Braunschweig, Institute of Plant Biology, Spielmannstrasse 7, 38106 Braunschweig, Germany
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Tang H, Zhou H. A novel nitrogen, phosphorus, and boron ionic pair compound toward fire safety and mechanical enhancement effect for epoxy resin. POLYM ADVAN TECHNOL 2019. [DOI: 10.1002/pat.4823] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Hao Tang
- College of Chemistry and Environmental TechnologyWuhan Institute of Technology Wuhan China
| | - Hong Zhou
- College of Chemistry and Environmental TechnologyWuhan Institute of Technology Wuhan China
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The functional principle of eukaryotic molybdenum insertases. Biochem J 2018; 475:1739-1753. [PMID: 29717023 DOI: 10.1042/bcj20170935] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 04/23/2018] [Accepted: 05/01/2018] [Indexed: 02/06/2023]
Abstract
The molybdenum cofactor (Moco) is a redox-active prosthetic group found in the active site of Moco-dependent enzymes, which are vitally important for life. Moco biosynthesis involves several enzymes that catalyze the subsequent conversion of GTP into cyclic pyranopterin monophosphate (cPMP), molybdopterin (MPT), adenylated MPT (MPT-AMP), and finally Moco. While the underlying principles of cPMP, MPT, and MPT-AMP formation are well understood, the molybdenum insertase (Mo-insertase)-catalyzed final Moco maturation step is not. In the present study, we analyzed high-resolution X-ray datasets of the plant Mo-insertase Cnx1E that revealed two molybdate-binding sites within the active site, hence improving the current view on Cnx1E functionality. The presence of molybdate anions in either of these sites is tied to a distinctive backbone conformation, which we suggest to be essential for Mo-insertase molybdate selectivity and insertion efficiency.
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