The Multiple Hydrogen-Bonding Networks of Polyol Ribitol

Synthesis, structural study and antitumor activity of novel alditol-based imidazophenanthrolines (aldo-IPs)

A series of 1H-imidazo [4,5-f][1,10] phenanthroline derivatives functionalized at 2-position with chiral, and conformationally flexible polyhydroxy alkyl chains derived from carbohydrates (alditol-based imidazophenanthrolines, aldo-IPs) is presented herein. These novel glycomimetics showed relevant and differential cytotoxic activity against several cultured tumor cell lines (PC3, HeLa and HT-29), dependent on the nature and stereochemistry of the polyhydroxy alkyl chain. The mannose-based aldo-IP demonstrated the higher cytotoxicity in the series, substantially better than cisplatin metallo-drug in all cell lines tested, and better than G-quadruplex ligand 360A in HeLa and HT29 cells. Cell cycle experiments and Annexin V-PI assays revealed that aldo-IPs induce apoptosis in HeLa cells. Initial study of DNA interactions by DNA FRET melting assays proved that the aldo-IPs produce only a slight thermal stabilization of DNA secondary structures, more pronounced in the case of quadruplex DNA. Viscosity titrations with CT dsDNA suggest that the compounds behave as DNA groove binders, whereas equilibrium dialysis assays showed that the compounds bind CT with Ka values in the range 104-105 M-1. The aldo-IP derivatives were obtained with synthetically useful yields through a feasible one-pot multistep process, by aerobic oxidative cyclization of 1,10-phenanthroline-5,6-diamine with a selection of unprotected aldoses using (NH4)2SO4 as promoter.

MIL-53 and its OH-bonded variants for bio-polyol adsorption from aqueous solution

The adsorption of bio-polyols from dilute aqueous solution is important but faces challenges in the sustainable bio-refinery process. One solution to increase adsorption efficiency is to leverage host–guest interactions between the polyols and materials to grant a preference for polyols. In this study, we synthesized MIL-53 and diverse OH-bonded variants, and studied their adsorption properties towards ethanediol, 1,3-propanediol and glycerol in water. Among the four materials, OH–MIL-53 exhibited fast adsorption kinetics and high capacity, and could be completely regenerated through ethanol elution. Hydrophobic interactions between the alkyl chains of the polyols and the organic linkers of OH–MIL-53 and hydrogen bonding interactions between their OH groups were identified. The synergistic effect of the host–guest interactions is responsible for the unique adsorption performances of OH–MIL-53 towards polyols, and particularly for 1,3-propanediol.

Delicate host–guest interaction drives OH-bonded MOF to capture bio-polyols from diluted aqueous solution, with high capacity, fast kinetics and recyclability.

Seven Conformations of the Macrocycle Cyclododecanone Unveiled by Microwave Spectroscopy

The physicochemical properties and reactivity of macrocycles are critically shaped by their conformations. In this work, we have identified seven conformations of the macrocyclic ketone cyclododecanone using chirped-pulse Fourier transform microwave spectroscopy in combination with ab initio and density functional theory calculations. Cyclododecanone is strongly biased towards adopting a square configuration of the heavy atom framework featuring three C-C bonds per side. The substitution and effective structures of this conformation have been determined through the observation of its ¹³C isotopologues. The minimisation of transannular interactions and, to a lesser extent, HCCH eclipsed configurations drive conformational preferences. Our results contribute to a better understanding of the intrinsic forces mediating structural choices in macrocycles.

Binding Site Switch by Dispersion Interactions: Rotational Signatures of Fenchone-Phenol and Fenchone-Benzene Complexes

Non-covalent interactions between molecules determine molecular recognition and the outcome of chemical and biological processes. Characterising how non-covalent interactions influence binding preferences is of crucial importance in advancing our understanding of these events. Here, we analyse the interactions involved in smell and specifically the effect of changing the balance between hydrogen-bonding and dispersion interactions by examining the complexes of the common odorant fenchone with phenol and benzene, mimics of tyrosine and phenylalanine residues, respectively. Using rotational spectroscopy and quantum chemistry, two isomers of each complex have been identified. Our results show that the increased weight of dispersion interactions in these complexes changes the preferred binding site in fenchone and sets the basis for a better understanding of the effect of different residues in molecular recognition and binding events.