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Jozeliu̅naitė A, Neniškis A, Bertran A, Bowen AM, Di Valentin M, Raišys S, Baronas P, Kazlauskas K, Vilčiauskas L, Orentas E. Fullerene Complexation in a Hydrogen-Bonded Porphyrin Receptor via Induced-Fit: Cooperative Action of Tautomerization and C-H···π Interactions. J Am Chem Soc 2022; 145:455-464. [PMID: 36546690 PMCID: PMC9837862 DOI: 10.1021/jacs.2c10668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
A supramolecular chiral hydrogen-bonded tetrameric aggregate possessing a large cavity and tetraarylporphyrin substituents was assembled using alternating 4H- and 2H-bonds between ureidopyrimidinone and isocytosine units, respectively. The aggregation mode was rationally shifted from social to narcissistic self-sorting by changing urea substituent size only. The H-bonded tetramer forms a strong complex with C60 guest, at the same time undergoing remarkable structural changes. Namely, the cavity adjusts to the guest via keto-to-enol tautomerization of the ureidopyrimidinone unit and as a result, porphyrin substituents move apart from each other in a scissor blade-like opening fashion. The rearrangement is accompanied by C-H···π interaction between the alkyl solubilizing groups and the nearby placed porphyrin π-systems. The latter interaction was found to be crucial for the guest complexation event, providing energetic compensation for otherwise costly tautomerization. We showed that only the systems possessing sufficiently long alkyl chains capable of interacting with a porphyrin ring are able to form a complex with C60. The structural rearrangement of the tetramer was quantitatively characterized by electron paramagnetic resonance pulsed dipolar spectroscopy measurements using photogenerated triplets of porphyrin and C60 as spin probes. Further exploring the C-H···π interaction as a decisive element for the C60 recognition, we investigated the guest-induced self-sorting phenomenon using scrambled tetramer assemblies composed of two types of monomers possessing alkyl chains of different lengths. The presence of the fullerene guest has enabled the selective scavenging of monomers capable of C-H···π interaction to form homo-tetrameric aggregates.
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Affiliation(s)
| | - Algirdas Neniškis
- Institute
of Chemistry, Vilnius University, LT-03225 Vilnius, Lithuania
| | - Arnau Bertran
- Centre
for Advanced Electron Spin Resonance and Inorganic Chemistry Laboratory,
Department of Chemistry, University of Oxford, OX1 3QR Oxford, United Kingdom
| | - Alice M. Bowen
- Department
of Chemistry, Photon Science Institute and The National EPR Research
Facility, The University of Manchester, Manchester M13 9PL, United Kingdom
| | - Marilena Di Valentin
- Department
of Chemical Sciences, University of Padova, 35131 Padova, Italy,Centro
Interdipartimentale di Ricerca “Centro Studi di Economia e
Tecnica dell’energia Giorgio Levi Cases”, 35131 Padova, Italy
| | - Steponas Raišys
- Institute
of Photonics and Nanotechnology, Vilnius
University, Saulėtekio
av. 3, LT-10257 Vilnius, Lithuania
| | - Paulius Baronas
- Institute
of Photonics and Nanotechnology, Vilnius
University, Saulėtekio
av. 3, LT-10257 Vilnius, Lithuania
| | - Karolis Kazlauskas
- Institute
of Photonics and Nanotechnology, Vilnius
University, Saulėtekio
av. 3, LT-10257 Vilnius, Lithuania
| | - Linas Vilčiauskas
- Institute
of Chemistry, Vilnius University, LT-03225 Vilnius, Lithuania,Center
for Physical Sciences and Technology (FTMC), Saulėtekio al. 3, LT-10257 Vilnius, Lithuania
| | - Edvinas Orentas
- Institute
of Chemistry, Vilnius University, LT-03225 Vilnius, Lithuania,
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2
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Jozeliu Naitė A, Javorskis T, Vaitkevičius V, Klimavičius V, Orentas E. Fully Supramolecular Chiral Hydrogen-Bonded Molecular Tweezer. J Am Chem Soc 2022; 144:8231-8241. [PMID: 35500199 DOI: 10.1021/jacs.2c01455] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Molecular tweezers are open-ended, cavity-possessing U-shaped molecular architectures with high potential for various applications in supramolecular chemistry. Their covalent synthesis, however, is often tedious and the structures obtained lack structural responsiveness beyond the limited conformational flexibility of the scaffold. Herein we present a proof-of-concept study on the design, synthesis, assembly, and transformations of a novel supramolecular construct─a fully noncovalent molecular tweezer. The supramolecular tweezer was assembled from a set of four building blocks, composed of two identical molecular angle bars and two flat aromatic extension wings, using hydrogen bonding only. The chirality-assisted aggregation process was utilized to ensure scaffold bending directionality using enantiomerically pure bicyclic angle bars. To address the challenges associated with shifting of the equilibrium from strong cooperative narcissistic self-sorting of self-complementary angle bars in cyclic aggregates toward integrative self-sorting in molecular tweezers, a rational desymmetrization strategy was applied. The dynamic supramolecular tweezer has been shown to display rich supramolecular chemistry, allowing for stimuli-responsive change in aggregate topology and solvent-responsive supramolecular polymerization.
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Affiliation(s)
- Augustina Jozeliu Naitė
- Department of Organic Chemistry, Vilnius University, Naugarduko 24, LT-03225 Vilnius, Lithuania
| | - Tomas Javorskis
- Department of Organic Chemistry, Vilnius University, Naugarduko 24, LT-03225 Vilnius, Lithuania
| | - Vytenis Vaitkevičius
- Department of Organic Chemistry, Vilnius University, Naugarduko 24, LT-03225 Vilnius, Lithuania
| | | | - Edvinas Orentas
- Department of Organic Chemistry, Vilnius University, Naugarduko 24, LT-03225 Vilnius, Lithuania
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3
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Chamorro PB, Aparicio F. Chiral nanotubes self-assembled from discrete non-covalent macrocycles. Chem Commun (Camb) 2021; 57:12712-12724. [PMID: 34749387 DOI: 10.1039/d1cc04968b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Many strategies have been used to construct supramolecular hollow tubes, including helical folding of oligomers, bundling of rod-like structures, rolling-up of sheets and stacking of covalent cycles. On the other hand, controlling chirality at the supramolecular level continues attracting much interest because of its implications in future applications of porous systems. This review article covers the main examples in the literature that use simple molecular structures as chiral units for precise assembly into discrete non-covalent cyclic structures that are able to form chiral supramolecular tubular systems.
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Affiliation(s)
- P B Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
| | - F Aparicio
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
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4
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Huo Y, He Z, Wang C, Zhang L, Xuan Q, Wei S, Wang Y, Pan D, Dong B, Wei R, Naik N, Guo Z. The recent progress of synergistic supramolecular polymers: preparation, properties and applications. Chem Commun (Camb) 2021; 57:1413-1429. [DOI: 10.1039/d0cc07247h] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Interactions for forming supramolecular polymers were reviewed together with their unique properties and applications with detailed examples.
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5
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Shi Q, Zhou X, Yuan W, Su X, Neniškis A, Wei X, Taujenis L, Snarskis G, Ward JS, Rissanen K, de Mendoza J, Orentas E. Selective Formation of S4- and T-Symmetric Supramolecular Tetrahedral Cages and Helicates in Polar Media Assembled via Cooperative Action of Coordination and Hydrogen Bonds. J Am Chem Soc 2020; 142:3658-3670. [PMID: 31983204 DOI: 10.1021/jacs.0c00722] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
We report on the synthesis and self-assembly study of novel supramolecular monomers encompassing quadruple hydrogen-bonding motifs and metal-coordinating 2,2'-bipyridine units. When mixed with metal ions such as Fe2+ or Zn2+, the tetrahedron cage complexes are formed in quantitative yields and full diastereoselectivity, even in highly polar acetonitrile or methanol solvents. The symmetry of the complexes obtained has been shown to depend critically on the flexibility of the ligand. Restriction of the rotation of the hydrogen-bonding unit with respect to the metal-coordinating site results in a T-symmetric cage, whereas introducing flexibility either through a methylene linker or rotating benzene ring allows the formation of S4-symmetric cages with self-filled interior. In addition, the possibility to select between tetrahedral cages or helicates and to control the dimensions of the aggregate has been demonstrated with a three-component assembly using external hydrogen-bonding molecular inserts or by varying the radius of the metal ion (Hg2+ vs Fe2+). Self-sorting studies of individual Fe2+ complexes with ligands of different sizes revealed their inertness toward ligand scrambling.
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Affiliation(s)
- Qixun Shi
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Jiangsu National Synergetic Innovation Center for Advanced Materials , Nanjing Tech University , Nanjing 211816 , China.,State Key Laboratory of Fine Chemicals , Dalian University of Technology , Dalian 116024 , China
| | - Xiaohong Zhou
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Jiangsu National Synergetic Innovation Center for Advanced Materials , Nanjing Tech University , Nanjing 211816 , China
| | - Wei Yuan
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Jiangsu National Synergetic Innovation Center for Advanced Materials , Nanjing Tech University , Nanjing 211816 , China
| | - Xiaoshi Su
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Jiangsu National Synergetic Innovation Center for Advanced Materials , Nanjing Tech University , Nanjing 211816 , China
| | - Algirdas Neniškis
- Department of Organic Chemistry , Vilnius University , Naugarduko 24 , LT-03225 Vilnius , Lithuania
| | - Xin Wei
- Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Jiangsu National Synergetic Innovation Center for Advanced Materials , Nanjing Tech University , Nanjing 211816 , China
| | - Lukas Taujenis
- Thermo Fisher Scientific Baltics , V. A. Graičiu̅no 8, LT-02241 Vilnius , Lithuania
| | - Gustautas Snarskis
- Department of Organic Chemistry , Vilnius University , Naugarduko 24 , LT-03225 Vilnius , Lithuania
| | - Jas S Ward
- Department of Chemistry , University of Jyvaskyla , P.O. Box 35 , 40014 Jyväskylä , Finland
| | - Kari Rissanen
- Department of Chemistry , University of Jyvaskyla , P.O. Box 35 , 40014 Jyväskylä , Finland
| | - Javier de Mendoza
- Institute of Chemical Research of Catalonia (ICIQ) , AV. Països Catalans, 16 , 43007 Tarragona , Spain
| | - Edvinas Orentas
- Department of Organic Chemistry , Vilnius University , Naugarduko 24 , LT-03225 Vilnius , Lithuania
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Bagdžiu̅nas G, Butkus E, Orentas E. Hierarchical Assembly toward Nanoparticles of a Chiral Palladium Supramolecular Complex Based on Bicyclo[3.3.1]nonane Framework. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00207] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Gintautas Bagdžiu̅nas
- Department of Material Science and Electrical Engineering, Center for Physical Sciences and Technology, Saulėtekio av. 3, Vilnius LT-10257, Lithuania
- Department of Organic Chemistry, Vilnius University, Faculty of Chemistry and Geosciences, Naugarduko 24, Vilnius LT-03225, Lithuania
| | - Eugenijus Butkus
- Institute of Biosciences, Life Sciences Center, Vilnius University, Saulėtekio av. 7, Vilnius, LT-10257, Lithuania
| | - Edvinas Orentas
- Department of Organic Chemistry, Vilnius University, Faculty of Chemistry and Geosciences, Naugarduko 24, Vilnius LT-03225, Lithuania
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7
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Aparicio F, Mayoral MJ, Montoro-García C, González-Rodríguez D. Guidelines for the assembly of hydrogen-bonded macrocycles. Chem Commun (Camb) 2019; 55:7277-7299. [DOI: 10.1039/c9cc03166a] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This article highlights selected examples on the synthesis of hydrogen-bonded macrocycles from ditopic molecules and analyze the main factors, often interrelated, that influence the equilibrium between ring and chain species.
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Affiliation(s)
- F. Aparicio
- Nanostructured Molecular Systems and Materials (MSMn) group
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
| | - M. J. Mayoral
- Nanostructured Molecular Systems and Materials (MSMn) group
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
| | - C. Montoro-García
- Nanostructured Molecular Systems and Materials (MSMn) group
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
| | - D. González-Rodríguez
- Nanostructured Molecular Systems and Materials (MSMn) group
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
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8
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Chen Q, Su X, Orentas E, Shi Q. Supramolecular crowns: a new class of cyclic hydrogen-bonded cavitands. Org Chem Front 2019. [DOI: 10.1039/c9qo00037b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A novel design of highly preorganized bicyclic monomers, based on quadruple hydrogen bonding motifs, is proposed to access noncovalent cavitands with large internal volumes and interesting shapes.
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Affiliation(s)
- Qiang Chen
- Institute of Advanced Synthesis
- School of Chemistry and Molecular Engineering
- Jiangsu National Synergetic Innovation Center for Advanced Materials
- Nanjing Tech University
- Nanjing 211816
| | - Xiaoshi Su
- Institute of Advanced Synthesis
- School of Chemistry and Molecular Engineering
- Jiangsu National Synergetic Innovation Center for Advanced Materials
- Nanjing Tech University
- Nanjing 211816
| | - Edvinas Orentas
- Department of Organic Chemistry
- Vilnius University
- Vilnius
- Lithuania
- Department of Nanoengineering
| | - Qixun Shi
- Institute of Advanced Synthesis
- School of Chemistry and Molecular Engineering
- Jiangsu National Synergetic Innovation Center for Advanced Materials
- Nanjing Tech University
- Nanjing 211816
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9
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Neniškis A, Račkauskaitė D, Shi Q, Robertson AJ, Marsh A, Ulčinas A, Valiokas R, Brown SP, Wärnmark K, Orentas E. A Tautoleptic Approach to Chiral Hydrogen-Bonded Supramolecular Tubular Polymers with Large Cavity. Chemistry 2018; 24:14028-14033. [PMID: 30070741 PMCID: PMC6391958 DOI: 10.1002/chem.201803701] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2018] [Indexed: 11/12/2022]
Abstract
A new strategy towards tubular hydrogen-bonded polymers based on the self-assembly of isocytosine tautomers in orthogonal directions is proposed and experimentally verified, including by 1 H fast magic-angle spinning (MAS) solid-state NMR. The molecular tubes obtained possess large internal diameter and tailor-made outer functionalities rendering them potential candidates for a number of applications.
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Affiliation(s)
| | | | - Qixun Shi
- Center for Analysis and SynthesisDepartment of ChemistryLund UniversityLundSweden
| | - Aiden J. Robertson
- Department of Physics and Department of ChemistryUniversity of WarwickCoventryUK
| | - Andrew Marsh
- Department of Physics and Department of ChemistryUniversity of WarwickCoventryUK
| | - Artūras Ulčinas
- Department of NanoengineeringCenter for Physical Sciences and TechnologyVilniusLithuania
| | - Ramūnas Valiokas
- Department of NanoengineeringCenter for Physical Sciences and TechnologyVilniusLithuania
| | - Steven P. Brown
- Department of Physics and Department of ChemistryUniversity of WarwickCoventryUK
| | - Kenneth Wärnmark
- Center for Analysis and SynthesisDepartment of ChemistryLund UniversityLundSweden
| | - Edvinas Orentas
- Department of Organic ChemistryVilnius UniversityVilniusLithuania
- Department of NanoengineeringCenter for Physical Sciences and TechnologyVilniusLithuania
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