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Abstract
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Fluorinated
carbohydrates have found many applications in the glycosciences.
Typically, these contain fluorination at a single position. There
are not many applications involving polyfluorinated carbohydrates,
here defined as monosaccharides in which more than one carbon has
at least one fluorine substituent directly attached to it, with the
notable exception of their use as mechanism-based inhibitors. The
increasing attention to carbohydrate physical properties, especially
around lipophilicity, has resulted in a surge of interest for this
class of compounds. This review covers the considerable body of work
toward the synthesis of polyfluorinated hexoses, pentoses, ketosugars,
and aminosugars including sialic acids and nucleosides. An overview
of the current state of the art of their glycosidation is also provided.
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Affiliation(s)
- Kler Huonnic
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, U.K
| | - Bruno Linclau
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, U.K.,Department of Organic and Macromolecular Chemistry, Ghent University, Campus Sterre, Krijgslaan 281-S4, Ghent, 9000, Belgium
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2
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Lessard O, Lainé D, Fecteau CÉ, Johnson PA, Giguère D. Fundamental curiosity of multivicinal inter-halide stereocenters. Org Chem Front 2022. [DOI: 10.1039/d2qo01433e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
A stereoselective strategy allowed the striking impact of a single halogen on the physical properties of inter-halide alkane units to be unravelled.
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Affiliation(s)
- Olivier Lessard
- Département de chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V0A6 Canada
| | - Danny Lainé
- Département de chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V0A6 Canada
| | - Charles-Émile Fecteau
- Département de chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V0A6 Canada
| | - Paul A. Johnson
- Département de chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V0A6 Canada
| | - Denis Giguère
- Département de chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V0A6 Canada
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3
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St-Gelais J, Leclerc C, Giguère D. Synthesis of fluorinated thiodigalactoside analogues. Carbohydr Res 2021; 511:108481. [PMID: 34837848 DOI: 10.1016/j.carres.2021.108481] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 11/16/2021] [Accepted: 11/17/2021] [Indexed: 12/14/2022]
Abstract
In this work, we report the first synthesis of fluorinated thiodigalactoside analogues. We used tri-isopropylsilyl thioglycosides as masked glycosyl thiol nucleophiles for the elaboration of two monofluorinated heterodimers, one difluorinated homodimer, and one difluorinated heterodimer. Moreover, we also present an alternative synthesis of 3-deoxy-3-fluorogalactose and 4-deoxy-4-fluorogalactose from a common precursor. Finally, this small set of more stable thiodigalactoside analogues could be interesting inhibitors of galactose-specific lectins.
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Affiliation(s)
- Jacob St-Gelais
- Département de Chimie, 1045 av. De la Médecine, Université Laval, Québec City, Qc, G1V 0A6, Canada
| | - Christina Leclerc
- Département de Chimie, 1045 av. De la Médecine, Université Laval, Québec City, Qc, G1V 0A6, Canada
| | - Denis Giguère
- Département de Chimie, 1045 av. De la Médecine, Université Laval, Québec City, Qc, G1V 0A6, Canada.
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4
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Hazelard D, Compain P. Nucleophilic Ring‐Opening of 1,6‐Anhydrosugars: Recent Advances and Applications in Organic Synthesis. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Damien Hazelard
- Laboratoire d'Innovation Moléculaire et Applications (LIMA) Univ. de Strasbourg Univ. de Haute-Alsace CNRS (UMR 7042) Equipe de Synthèse Organique et Molécules Bioactives (SYBIO) ECPM 25 Rue Becquerel 67000 Strasbourg France
| | - Philippe Compain
- Laboratoire d'Innovation Moléculaire et Applications (LIMA) Univ. de Strasbourg Univ. de Haute-Alsace CNRS (UMR 7042) Equipe de Synthèse Organique et Molécules Bioactives (SYBIO) ECPM 25 Rue Becquerel 67000 Strasbourg France
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5
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Tremblay T, St-Gelais J, Houde M, Giguère D. Polyfluoroglycoside Synthesis via Simple Alkylation of an Anomeric Hydroxyl Group: Access to Fluoroetoposide Analogues. J Org Chem 2021; 86:4812-4824. [DOI: 10.1021/acs.joc.0c02841] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Thomas Tremblay
- Département de Chimie, Université Laval, PROTEO, 1045 av. De la Médecine, Québec City, QC, Canada G1 V 0A6
| | - Jacob St-Gelais
- Département de Chimie, Université Laval, PROTEO, 1045 av. De la Médecine, Québec City, QC, Canada G1 V 0A6
| | - Maxime Houde
- Département de Chimie, Université Laval, PROTEO, 1045 av. De la Médecine, Québec City, QC, Canada G1 V 0A6
| | - Denis Giguère
- Département de Chimie, Université Laval, PROTEO, 1045 av. De la Médecine, Québec City, QC, Canada G1 V 0A6
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Lainé D, Lessard O, St-Gelais J, Giguère D. From Carbohydrates to Complex Organofluorines: Synthesis, Conformation, and Lipophilicity of Multivicinal-Fluorine-Containing Hexitol Analogues. Chemistry 2021; 27:3799-3805. [PMID: 33290627 DOI: 10.1002/chem.202004646] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Revised: 11/26/2020] [Indexed: 02/02/2023]
Abstract
There is growing interest in the preparation of fluorine-containing organic molecules. Multivicinal-fluorine analogues are among the most intriguing and promising compounds, but their physical and biological investigations are held back by challenging syntheses. Herein, we report on the synthesis of a large set of novel polyfluorohexitols. The dominant solution-state conformation of all trifluorohexitols was determined, and the solid-state conformations of some analogues were compared. Finally, the lipophilicity of a large set of polyfluorinated hexopyranose and hexitol analogues was attributed by using a log P determination method based on 19 F NMR spectroscopy.
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Affiliation(s)
- Danny Lainé
- Département de Chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V 0A6, Canada
| | - Olivier Lessard
- Département de Chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V 0A6, Canada
| | - Jacob St-Gelais
- Département de Chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V 0A6, Canada
| | - Denis Giguère
- Département de Chimie, Université Laval, 1045 Avenue de la Médecine, Quebec City, QC, G1V 0A6, Canada
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Hevey R. The Role of Fluorine in Glycomimetic Drug Design. Chemistry 2020; 27:2240-2253. [DOI: 10.1002/chem.202003135] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Indexed: 11/10/2022]
Affiliation(s)
- Rachel Hevey
- Department of Pharmaceutical Sciences University of Basel, Pharmazentrum Klingelbergstrasse 50 4056 Basel Switzerland
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8
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Lainé D, Denavit V, Lessard O, Carrier L, Fecteau CÉ, Johnson PA, Giguère D. Fluorine effect in nucleophilic fluorination at C4 of 1,6-anhydro-2,3-dideoxy-2,3-difluoro-β-D-hexopyranose. Beilstein J Org Chem 2020; 16:2880-2887. [PMID: 33299486 PMCID: PMC7705882 DOI: 10.3762/bjoc.16.237] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Accepted: 11/08/2020] [Indexed: 12/22/2022] Open
Abstract
In this work, we have developed a simple synthetic approach using Et3N·3HF as an alternative to the DAST reagent. We controlled the stereochemistry of the nucleophilic fluorination at C4 of 1,6-anhydro-2,3-dideoxy-2,3-difluoro-4-O-triflate-β-ᴅ-talopyranose using Et3N·3HF or in situ generated Et3N·1HF. The influence of the fluorine atom at C2 on reactivity at C4 could contribute to a new fluorine effect in nucleophilic substitution. Finally, with the continuous objective of synthesizing novel multi-vicinal fluorosugars, we prepared one difluorinated and one trifluorinated alditol analogue.
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Affiliation(s)
- Danny Lainé
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
| | - Vincent Denavit
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
| | - Olivier Lessard
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
| | - Laurie Carrier
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
| | - Charles-Émile Fecteau
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
| | - Paul A Johnson
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
| | - Denis Giguère
- Département de chimie, Université Laval, 1045 av. De la Médecine, Québec City, Qc, G1V 0A6, Canada
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St-Gelais J, Côté É, Lainé D, Johnson PA, Giguère D. Addressing the Structural Complexity of Fluorinated Glucose Analogues: Insight into Lipophilicities and Solvation Effects. Chemistry 2020; 26:13499-13506. [PMID: 32652740 DOI: 10.1002/chem.202002825] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Indexed: 01/24/2023]
Abstract
In this work, we synthesized all mono-, di-, and trifluorinated glucopyranose analogues at positions C-2, C-3, C-4, and C-6. This systematic investigation allowed us to perform direct comparison of 19 F resonances of fluorinated glucose analogues and also to determine their lipophilicities. Compounds with a fluorine atom at C-6 are usually the most hydrophilic, whereas those with vicinal polyfluorinated motifs are the most lipophilic. Finally, the solvation energies of fluorinated glucose analogues were assessed for the first time by using density functional theory. This method allowed the log P prediction of fluoroglucose analogues, which was comparable to the C log P values obtained from various web-based programs.
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Affiliation(s)
- Jacob St-Gelais
- Département de Chimie, Université Laval, 1045 av. De la Médecine, Québec City, QC, G1V 0A6, Canada
| | - Émilie Côté
- Département de Chimie, Université Laval, 1045 av. De la Médecine, Québec City, QC, G1V 0A6, Canada
| | - Danny Lainé
- Département de Chimie, Université Laval, 1045 av. De la Médecine, Québec City, QC, G1V 0A6, Canada
| | - Paul A Johnson
- Département de Chimie, Université Laval, 1045 av. De la Médecine, Québec City, QC, G1V 0A6, Canada
| | - Denis Giguère
- Département de Chimie, Université Laval, 1045 av. De la Médecine, Québec City, QC, G1V 0A6, Canada
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10
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Tyrikos-Ergas T, Fittolani G, Seeberger PH, Delbianco M. Structural Studies Using Unnatural Oligosaccharides: Toward Sugar Foldamers. Biomacromolecules 2019; 21:18-29. [DOI: 10.1021/acs.biomac.9b01090] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Theodore Tyrikos-Ergas
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Giulio Fittolani
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Peter H. Seeberger
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Martina Delbianco
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
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St-Gelais J, Bouchard M, Denavit V, Giguère D. Synthesis and Lipophilicity of Trifluorinated Analogues of Glucose. J Org Chem 2019; 84:8509-8522. [DOI: 10.1021/acs.joc.9b00795] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Jacob St-Gelais
- Département de Chimie, Université Laval, PROTEO, RQRM, 1045 Avenue De la Médecine, Québec City, Quebec, Canada G1V 0A6
| | - Megan Bouchard
- Département de Chimie, Université Laval, PROTEO, RQRM, 1045 Avenue De la Médecine, Québec City, Quebec, Canada G1V 0A6
| | - Vincent Denavit
- Département de Chimie, Université Laval, PROTEO, RQRM, 1045 Avenue De la Médecine, Québec City, Quebec, Canada G1V 0A6
| | - Denis Giguère
- Département de Chimie, Université Laval, PROTEO, RQRM, 1045 Avenue De la Médecine, Québec City, Quebec, Canada G1V 0A6
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12
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Tremblay T, Robert-Scott G, Bérubé C, Carpentier A, Voyer N, Giguère D. Synthesis of C-terminal glycopeptidesviaoxime resin aminolysis. Chem Commun (Camb) 2019; 55:13741-13744. [DOI: 10.1039/c9cc07481c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
We developed a general solid-phase approach to complex C-terminal glycopeptides.
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Affiliation(s)
- Thomas Tremblay
- Département de Chimie and PROTEO
- Université Laval
- Faculté des sciences et de génie
- Québec
- Canada
| | - Gabrielle Robert-Scott
- Département de Chimie and PROTEO
- Université Laval
- Faculté des sciences et de génie
- Québec
- Canada
| | - Christopher Bérubé
- Département de Chimie and PROTEO
- Université Laval
- Faculté des sciences et de génie
- Québec
- Canada
| | - Antoine Carpentier
- Département de Chimie and PROTEO
- Université Laval
- Faculté des sciences et de génie
- Québec
- Canada
| | - Normand Voyer
- Département de Chimie and PROTEO
- Université Laval
- Faculté des sciences et de génie
- Québec
- Canada
| | - Denis Giguère
- Département de Chimie and PROTEO
- Université Laval
- Faculté des sciences et de génie
- Québec
- Canada
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