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Yamamoto A, Liu X, Arashiba K, Konomi A, Tanaka H, Yoshizawa K, Nishibayashi Y, Yoshida H. Coordination Structure of Samarium Diiodide in a Tetrahydrofuran-Water Mixture. Inorg Chem 2023; 62:5348-5356. [PMID: 36728764 DOI: 10.1021/acs.inorgchem.2c03752] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Chemoselective reductive conversion of organic and inorganic compounds has been developed by the combination of samarium(II) diiodide (SmI2) and water. Despite the extensive previous studies to elucidate the role of water in the reactivity of SmI2, the direct structural data of the reactive Sm2+-water complexes, SmI2(H2O)n, in an organic solvent-water mixture have not been reported experimentally so far. Herein, we performed the structure analysis of the Sm2+-water complex in tetrahydrofuran (THF) in the presence of water by in situ X-ray absorption spectroscopy using high-energy X-rays (Sm K-edge, 46.8 keV). The analysis revealed the dissociation of the Sm2+-I bonds in the presence of ≥ eight equivalents of water in the THF-water mixture. The origin of the peak shift in the UV/visible absorption spectra after the addition of water into SmI2/THF solution was proposed based on electron transitions simulated with time-dependent density-functional-theory calculations using optimized structures in THF or water. The obtained structural information provides the fundamental insights for elucidating the reactivity and chemoselectivity in the Sm2+-water complex system.
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Affiliation(s)
- Akira Yamamoto
- Department of Interdisciplinary Environment, Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo-ku, Kyoto606-8501, Japan.,Elements Strategy Initiative for Catalysts & Batteries (ESICB), Kyoto University, Kyotodaigaku Katsura, Nishikyo-ku, Kyoto615-8520, Japan
| | - Xueshi Liu
- Department of Interdisciplinary Environment, Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo-ku, Kyoto606-8501, Japan
| | - Kazuya Arashiba
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo113-8656, Japan
| | - Asuka Konomi
- Institute for Materials Chemistry and Engineering, Kyushu University, Nishi-ku, Fukuoka819-0395, Japan
| | - Hiromasa Tanaka
- School of Liberal Arts and Sciences, Daido University, Minami-ku, Nagoya457-8530, Japan
| | - Kazunari Yoshizawa
- Elements Strategy Initiative for Catalysts & Batteries (ESICB), Kyoto University, Kyotodaigaku Katsura, Nishikyo-ku, Kyoto615-8520, Japan.,Institute for Materials Chemistry and Engineering, Kyushu University, Nishi-ku, Fukuoka819-0395, Japan
| | - Yoshiaki Nishibayashi
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo113-8656, Japan
| | - Hisao Yoshida
- Department of Interdisciplinary Environment, Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo-ku, Kyoto606-8501, Japan.,Elements Strategy Initiative for Catalysts & Batteries (ESICB), Kyoto University, Kyotodaigaku Katsura, Nishikyo-ku, Kyoto615-8520, Japan
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2
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Green Dynamic Kinetic Resolution—Stereoselective Acylation of Secondary Alcohols by Enzyme-Assisted Ruthenium Complexes. Catalysts 2022. [DOI: 10.3390/catal12111395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Dynamic kinetic resolution allows for the synthesis of enantiomerically pure asymmetric alcohols. Cyclopentadienyl-derived ruthenium catalysts were immobilized with an ionic liquid, [BMIM][NTf2], on multiwall carbon nanotubes and used for the racemization of chiral secondary alcohols. This successful approach was combined with the enantioselective enzymatic acylation of secondary alcohols (1-phenylethanol and 1-(1-naphthyl)ethanol) using Novozyme® 435. The resulting catalytic system of the ruthenium racemization catalysts and enzymatic acylation led to chiral esters being obtained by dynamic kinetic resolution. The immobilized catalytic system in the ionic liquid gave the same activity of >96% yield within 6 h and a selectivity of 99% enantiomeric excess as the homogeneous system, while allowing for the convenient separation of the desired products from the catalyst. Additionally, the process can be regarded as green, since the efficient reuse of the catalytic system was demonstrated.
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3
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Progress on the Stereoselective Synthesis of Chiral Molecules Based on Metal-Catalyzed Dynamic Kinetic Resolution of Alcohols with Lipases. Symmetry (Basel) 2021. [DOI: 10.3390/sym13091744] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Abstract
Metal/lipase-combo catalyzed dynamic kinetic resolution (DKR) of racemic chiral alcohols is a general and practical process to obtain the corresponding enantiopure esters R with quantitative conversion. The use of known Ru-catalysts as well as newly developed homogeneous and heterogeneous metal catalysts (Fe, V) contributed to make the DKR process more sustainable and to expand the substrate scope of the reaction. In addition to classical substrates, challenging allylic alcohols, tertiary alcohols, C1-and C2-symmetric biaryl diols turned out to be competent substrates. Synthetic utility further emerged from the integration of this methodology into cascade reactions leading to linear/cyclic chiral molecules with high ee through the formation of multiple bonds, in a one-pot procedure.
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4
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Edington SC, Perez EH, Charboneau DJ, Menges FS, Hazari N, Johnson MA. Chemical Reduction of Ni II Cyclam and Characterization of Isolated Ni I Cyclam with Cryogenic Vibrational Spectroscopy and Inert-Gas-Mediated High-Resolution Mass Spectrometry. J Phys Chem A 2021; 125:6715-6721. [PMID: 34324319 DOI: 10.1021/acs.jpca.1c05016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
NiII cyclam (cyclam = 1,4,8,11-tetraazacyclotetradecane) is an efficient catalyst for the selective reduction of CO2 to CO. A crucial elementary step in the proposed catalytic cycle is the coordination of CO2 to a NiI cyclam intermediate. Isolation and spectroscopic characterization of this labile NiI species without solvent has proven to be challenging, however, and only partial IR spectra have previously been reported using multiple photon fragmentation of ions generated by gas-phase electron transfer to the NiII cyclam dication at 300 K. Here, we report a chemical reduction method that efficiently prepares NiI cyclam in solution. This enables the NiI complex to be transferred into a cryogenic photofragmentation mass spectrometer using inert-gas-mediated electrospray ionization. The vibrational spectra of the 30 K ion using both H2 and N2 messenger tagging over the range 800-4000 cm-1 were then measured. The resulting spectra were analyzed with the aid of electronic structure calculations, which show strong method dependence in predicted band positions and small molecule activation. The conformational changes of the cyclam ligand induced by binding of the open shell NiI cation were compared with those caused by the spherical, closed-shell LiI cation, which has a similar ionic radius. We also report the vibrational spectrum of a NiI cyclam complex with a strongly bound O2 ligand. The cyclam ligand supporting this species exhibits a large conformational change compared to the complexes with weakly bound N2 and H2, which is likely due to significant charge transfer from Ni to the coordinated O2.
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Affiliation(s)
- Sean C Edington
- Sterling Chemistry Laboratory, Chemistry Department, Yale University, New Haven, Connecticut 06520, United States
| | - Evan H Perez
- Sterling Chemistry Laboratory, Chemistry Department, Yale University, New Haven, Connecticut 06520, United States
| | - David J Charboneau
- Sterling Chemistry Laboratory, Chemistry Department, Yale University, New Haven, Connecticut 06520, United States
| | - Fabian S Menges
- Sterling Chemistry Laboratory, Chemistry Department, Yale University, New Haven, Connecticut 06520, United States
| | - Nilay Hazari
- Sterling Chemistry Laboratory, Chemistry Department, Yale University, New Haven, Connecticut 06520, United States
| | - Mark A Johnson
- Sterling Chemistry Laboratory, Chemistry Department, Yale University, New Haven, Connecticut 06520, United States
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5
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Gloriozov IP, Dem'yanov PI, Zhulyaev NS, Nechaev MS, Oprunenko YF, Gam F, Saillard JY, Kuznetsov AE. DFT Investigation of the η 6 ⇌ η 6-Inter-ring Haptotropic Rearrangement of the Group 8 Metals Complexes [(graphene)MCp] + (M = Fe, Ru, Os). J Phys Chem A 2021; 125:366-375. [PMID: 33356252 DOI: 10.1021/acs.jpca.0c08251] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Metalcyclopentadienyl complexes (MCp)+ (M = Fe, Ru, Os) bound to the large polyaromatic hydrogenated hydrocarbon (PAH) C96H24 used as a model for pristine graphene have been studied using a density functional theory (DFT) generalized gradient approximation (PBE functional) to reveal their structural features and dynamic behavior. The inter-ring haptotropic rearrangements (IRHRs) for these complexes were shown to occur via two transition states and one intermediate. The energy barriers of the η6 ⇌ η6 IRHRs of the (MCp)+ unit were found to be 30, 27, and 29 kcal/mol for M = Fe, Ru, and Os, respectively. These values are significantly lower than the values found previously for smaller PAHs. Both polar and nonpolar solvents were found not to affect significantly the energy barrier heights. Investigated transition metal complexes could be used in general as catalysts in the design of novel derivatives or materials with promising properties. Metalcyclopentadienyl complexes (MCp)+ of PAHs show catalytic properties mainly due to their structural details as well as their important characteristic of inter-ring haptotropic rearrangement. IRHRs take place usually by intramolecular mechanisms. During IRHRs, the MLn organometallic groups (OMGs) undergo shifting along the PAH plane and could coordinate additional reagents, which is important for catalysis. Large PAHs such as graphene, fullerenes, and nanotubes possess intrinsic anticancer activity, and numerous arene complexes of Ru and Os have been proven to have anticancer properties as well. We suppose that coordinating Ru or Os to very large PAHs could synergistically increase the anticancer activity of resulting complexes.
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Affiliation(s)
- Igor P Gloriozov
- Department of Chemistry, M. V. Lomonosov Moscow State University, Leninskie Gory 1, Building 3, 119991 Moscow, Russia
| | - Piotr I Dem'yanov
- Department of Chemistry, M. V. Lomonosov Moscow State University, Leninskie Gory 1, Building 3, 119991 Moscow, Russia
| | - Nikolay S Zhulyaev
- Department of Chemistry, M. V. Lomonosov Moscow State University, Leninskie Gory 1, Building 3, 119991 Moscow, Russia
| | - Mikhail S Nechaev
- Department of Chemistry, M. V. Lomonosov Moscow State University, Leninskie Gory 1, Building 3, 119991 Moscow, Russia.,A. V. Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, Leninsky Prospect 29, 119991 Moscow, Russia
| | - Yuri F Oprunenko
- Department of Chemistry, M. V. Lomonosov Moscow State University, Leninskie Gory 1, Building 3, 119991 Moscow, Russia
| | - Franck Gam
- ISCR-UMR 6226, Université Rennes, CNRS, F-35000 Rennes, France
| | | | - Aleksey E Kuznetsov
- Department of Chemistry, Universidad Técnica Federico Santa Maria, Av. Santa Maria 6400, Vitacura, 7660251 Santiago, Chile
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6
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Zhang D, Yang D, Wang S, Zeng L, Xin J, Zhang H, Lei A. The Real Structure of Pd(
OAc
)
2
in Various Solvents
†. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202000483] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Dongchao Zhang
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
| | - Dali Yang
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
| | - Shengchun Wang
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
| | - Li Zeng
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
| | - Jie Xin
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
| | - Heng Zhang
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
| | - Aiwen Lei
- The Institute for Advanced Studies (IAS), College of Chemistry and Molecular Sciences, Wuhan University Wuhan Hubei 430072 China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences 345 Lingling Lu Shanghai 200032 China
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7
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Gustafson KPJ, Guðmundsson A, Bajnóczi ÉG, Yuan N, Zou X, Persson I, Bäckvall JE. In Situ Structural Determination of a Homogeneous Ruthenium Racemization Catalyst and Its Activated Intermediates Using X-Ray Absorption Spectroscopy. Chemistry 2020; 26:3411-3419. [PMID: 31976570 PMCID: PMC7155078 DOI: 10.1002/chem.201905479] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Indexed: 12/30/2022]
Abstract
The activation process of a known Ru‐catalyst, dicarbonyl(pentaphenylcyclopentadienyl)ruthenium chloride, has been studied in detail using time resolved in situ X‐ray absorption spectroscopy. The data provide bond lengths of the species involved in the process as well as information about bond formation and bond breaking. On addition of potassium tert‐butoxide, the catalyst is activated and an alkoxide complex is formed. The catalyst activation proceeds via a key acyl intermediate, which gives rise to a complete structural change in the coordination environment around the Ru atom. The rate of activation for the different catalysts was found to be highly dependent on the electronic properties of the cyclopentadienyl ligand. During catalytic racemization of 1‐phenylethanol a fast‐dynamic equilibrium was observed.
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Affiliation(s)
- Karl P J Gustafson
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, 10691, Stockholm, Sweden.,Department of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, 10691, Stockholm, Sweden.,Present address: Borregaard, P.O. Box 162, 1701, Sarpsborg, Norway
| | - Arnar Guðmundsson
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, 10691, Stockholm, Sweden
| | - Éva G Bajnóczi
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, P.O. Box 7015, 75007, Uppsala, Sweden.,Present address: Wigner Research Centre for Physics, Konkoly-Thege Miklós út 29-33, 1121, Budapest, Hungary
| | - Ning Yuan
- Department of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, 10691, Stockholm, Sweden.,Department of Molecular Sciences, Swedish University of Agricultural Sciences, P.O. Box 7015, 75007, Uppsala, Sweden
| | - Xiaodong Zou
- Department of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, 10691, Stockholm, Sweden
| | - Ingmar Persson
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, P.O. Box 7015, 75007, Uppsala, Sweden
| | - Jan-E Bäckvall
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, 10691, Stockholm, Sweden
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