New Supercage Metal–Organic Framework Based on Allopurinol Ligands Showing Acetylene Storage and Separation

Exploring cyclin-dependent kinase inhibitors: a comprehensive study in search of CDK-6 inhibitors using a pharmacophore modelling and dynamics approach

Cancer prevalence and resistance issues in cancer treatment are a significant public health concern globally. Among the existing strategies in cancer therapy, targeting cyclin-dependent kinases (CDKs), especially CDK-6 is found to be one of the most promising targets, as this enzyme plays a pivotal role in cell cycle stages and cell proliferation. Cell proliferation is the characteristic feature of cancer giving rise to solid tumours. Our research focuses on creating novel compounds, specifically, pyrazolopyrimidine fused azetidinones, using a groundbreaking molecular hybridization approach to target CDK-6. Through computational investigations, ligand-based pharmacophore modelling, pharmacokinetic studies (ADMET), molecular docking, and dynamics simulations, we identified 18 promising compounds. The pharmacophore model featured one aromatic hydrophobic centre (F1: Aro/Hyd) and two H-bond acceptors (F2 and F3: Acc). Molecular docking results showed favourable binding energies (-6.5 to -8.0 kcal mol-1) and effective hydrogen bonds and hydrophobic interactions. The designed compounds demonstrated good ADMET profiles. Specifically, B6 and B18 showed low energy conformation (-7.8 kcal and -7.6 kcal), providing insights into target inhibition compared to the standard drug Palbociclib. Extensive molecular dynamics simulations confirmed the stability of these derivatives. Throughout the 100 ns simulation, the ligand-protein complexes maintained structural stability, with acceptable RMSD values. These compounds hold promise as potential leads in cancer therapy.

Differential fluorescent response to amino acids based on metal-organic framework Zn-PBC

A novel metal-organic framework (MOF) Zn-PBC (H2PBC = pyridine-3,5-bis(phenyl-4-carboxylic acid)) was designed and synthesized via a solvothermal reaction with the H2PBC ligand, and produced a strong fluorescence. The material exhibited good stability and an ideal luminescent property in water. In addition, it was found that Zn-PBC displayed a different fluorescent response to different types of amino acids, and the mechanism was investigated. This research might give insight to the interaction between MOFs and amino acids, which would provide a strategy to fabricate MOF-based sensors for biomolecules in future.

Partial Linker Substitution Strategy to Construct a Quaternary HKUST-like MOF for Efficient Acetylene Storage and Separation

Multicomponent metal-organic frameworks (MOFs) have received much attention as emerging materials capable of precisely programing exquisite structures and specific functions. Here, we applied a partial linker substitution strategy to compile an HKUST-1-like quaternary MOF by introducing a bifunctional ligand into the well-known HKUST-1 structure. FUT-1, a new HKUST-like tbo topology MOF, was assembled with paddlewheel [Cu₂(COO)₄], triangular metallocycle pyrazole cluster Cu₃(μ₃-OH) (NN)₃ building blocks, and two distinct linkers. FUT-1 exhibited good mechanical stability, water stability, and chemical stability (pH = 3-12) in aqueous solutions. Moreover, the porous environments created by this multicomponent primitive endow FUT-1 with high C₂H₂ storage and significantly selective separation performance of C₂H₂/CO₂. Dynamic breakthrough experiments and ideal adsorbed solution theory calculations further demonstrate that FUT-1 can selectively capture C₂H₂ from C₂H₂/CO₂ mixtures under ambient conditions. Based on grand canonical Monte Carlo simulations, the high C₂H₂ separation performance of FUT-1 is attributed to the π-complex formed between the C₂H₂ molecule and the trinuclear metallocycle clusters on the wall, which provides stronger affinity for C₂H₂ recognition than the CO₂ molecule.

Pyrazolopyrimidines as anticancer agents: A review on structural and target-based approaches

Pyrazolopyrimidine scaffold is one of the privileged heterocycles in drug discovery. This scaffold produced numerous biological activities in which anticancer is important one. Previous studies showed its importance in interactions with various receptors such as growth factor receptor, TGFBR2 gene, CDK2/cyclin E and Abl kinase, adenosine receptor, calcium-dependent Protein Kinase, Pim-1 kinase, Potent Janus kinase 2, BTK kinase, P21-activated kinase 1, extracellular signal-regulated kinase 2, histone lysine demethylase and Human Kinesin-5. However, there is a need of numerous studies for the discovery of target based potential compounds. The structure activity relationship studies may help to explore the generation of potential compounds in short time period. Therefore, in the present review we tried to explore the structural aspects of Pyrazolopyrimidine with their structure activity relationship against various targets for the development of potential compounds. The current review is the compilation of significant advances made on Pyrazolopyrimidines reported between 2015 and 2020.

Molecular engineering in a family of pillared-layered metal-organic frameworks for tuning gas adsorption behavior

In this work, inspired by a water-assisted three-dimensional supramolecular structure 1, we use a mixed-ligand strategy to form a 3D pillared-layered matrix by the introduction of linear ligands to compete against the water molecules. The resulting analogue microporous MOFs of 2-H, 2-F and 2-N, decorated with different functional groups, similarly show the CO2 uptake. Thanks to the negligible N2 adsorption capacity, enhanced selective adsorption towards CO2 is achieved in compound 2-N. That is, we present here an alternative plan for the high CO2 selective adsorption performance. In addition, the structure stability and moderate affinity for CO2 of these microporous MOFs endow them with excellent reusability.

Engineering ligand conformation by substituent manipulation towards diverse copper-tricarboxylate frameworks with tuned gas adsorption properties

To expand the structural diversity and optimize the material performance, it is essential but challenging to regulate MOF structures in a predictable and controllable manner. In this work, by manipulating the substituents to engineer the ligand conformations, we designed and synthesized two asymmetric tricarboxylate ligands, and used them to successfully target two copper-tricarboxylate frameworks with diversified topologies depending on the ligand conformations. Besides, the ligand asymmetry induced the formation of two uncommon kinds of copper-carboxylate clusters, thus greatly expanding the library of copper-carboxylate secondary building units. Furthermore, the two compounds also displayed tunable gas adsorption properties pertinent to C2H2 separation and purification. At 298 K and 1 atm, the uptake capacity of C2H2 varies from 79.5 to 104.6 cm3 (STP) g-1, while the adsorption selectivities of C2H2 with respect to CO2 and CH4 are in the range of 2.3-3.8 and 15.3-21.6 for the equimolar components, respectively. Compared to the nitro counterpart, the methoxy MOF features higher C2H2 uptake capacity, larger C2H2/CO2 and C2H2/CH4 adsorption selectivities, and lower regeneration energy. This work demonstrates that simple ligand modification can be used to engineer the structures and tune gas adsorption properties of the resulting MOFs.

AnN-oxide-functionalized nanocage-based copper-tricarboxylate framework for the selective capture of C2H2

AnN-oxide-functionalized copper-tricarboxylate framework displayed promising potential for use in C₂H₄and C₂H₂purification.