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González-Alfaro S, Fernández-Liencres MP, Jiménez-Pulido SB, Illán-Cabeza NA, Sánchez-Ruiz A, García-Martínez JC, Navarro A, Rodríguez-López J. Benchmarking luminescent properties of the arylvinylpyrimidine scaffold. J Chem Phys 2024; 161:164307. [PMID: 39445620 DOI: 10.1063/5.0224650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Accepted: 10/09/2024] [Indexed: 10/25/2024] Open
Abstract
The exploration of the photophysical properties of push-pull molecules incorporating pyrimidine rings as electron-attracting moieties in their structure continues to be a fascinating area of investigation. A thorough examination of these properties not only contributes to fundamental knowledge but also provides crucial insights for the rational design of emissive materials in prospective applications. In this context, this work conducts an in-depth analysis of four families of 4,6-bis(arylvinyl)pyrimidines, evaluating the influence of substituents on both the aryl groups and position 2 of the pyrimidine ring. While previous research has primarily focused on solution studies, this work emphasizes the importance of examining solid-state photophysics. Through a multidisciplinary approach encompassing optical techniques, x-ray diffraction, and quantum chemical calculations, a comprehensive understanding of the structure-property relationships is achieved. This study underscores the intricate interplay between molecular structure, aggregation, and fluorescence behavior in pyrimidines, offering valuable insights with broader implications beyond academic realms.
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Affiliation(s)
- Sergio González-Alfaro
- Universidad de Castilla-La Mancha, Facultad de Farmacia, Área de Química Orgánica, Avda. Doctor José María Sánchez Ibáñez s/n, 02008 Albacete, Spain
- Universidad de Castilla-La Mancha, Instituto de Biomedicina (IB-UCLM), C/ Almansa 13, 02008 Albacete, Spain
| | - M Paz Fernández-Liencres
- Universidad de Jaén, Facultad de Ciencias Experimentales, Dpto. de Química Física y Analítica, Campus Las Lagunillas, 23071 Jaén, Spain
| | - Sonia B Jiménez-Pulido
- Universidad de Jaén, Facultad de Ciencias Experimentales, Dpto. de Química Inorgánica y Orgánica, Campus Las Lagunillas, 23071 Jaén, Spain
| | - Nuria A Illán-Cabeza
- Universidad de Jaén, Facultad de Ciencias Experimentales, Dpto. de Química Inorgánica y Orgánica, Campus Las Lagunillas, 23071 Jaén, Spain
| | - Antonio Sánchez-Ruiz
- Universidad de Castilla-La Mancha, Facultad de Farmacia, Área de Química Orgánica, Avda. Doctor José María Sánchez Ibáñez s/n, 02008 Albacete, Spain
- Universidad de Castilla-La Mancha, Instituto de Biomedicina (IB-UCLM), C/ Almansa 13, 02008 Albacete, Spain
| | - Joaquín C García-Martínez
- Universidad de Castilla-La Mancha, Facultad de Farmacia, Área de Química Orgánica, Avda. Doctor José María Sánchez Ibáñez s/n, 02008 Albacete, Spain
- Universidad de Castilla-La Mancha, Instituto de Biomedicina (IB-UCLM), C/ Almansa 13, 02008 Albacete, Spain
| | - Amparo Navarro
- Universidad de Jaén, Facultad de Ciencias Experimentales, Dpto. de Química Física y Analítica, Campus Las Lagunillas, 23071 Jaén, Spain
| | - Julián Rodríguez-López
- Universidad de Castilla-La Mancha, Facultad de Ciencias y Tecnologías Químicas, Área de Química Orgánica, Avda. Camilo José Cela 10, 13071 Ciudad Real, Spain
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Pavlović Saftić D, Krošl Knežević I, de Lera Garrido F, Tolosa J, Majhen D, Piantanida I, García Martínez JC. Trimeric and Tetrameric Cationic Styryl Dyes as Novel Fluorescence and CD Probes for ds-DNA and ds-RNA. Int J Mol Sci 2024; 25:5724. [PMID: 38891911 PMCID: PMC11171523 DOI: 10.3390/ijms25115724] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Revised: 05/16/2024] [Accepted: 05/20/2024] [Indexed: 06/21/2024] Open
Abstract
The wide use of mono- or bis-styryl fluorophores in biomedical applications prompted the presented design and study of a series of trimeric and tetrameric homo-analogues, styryl moieties arranged around a central aromatic core. The interactions with the most common biorelevant targets, ds-DNA and ds-RNA, were studied by a set of spectrophotometric methods (UV-VIS, fluorescence, circular dichroism, thermal denaturation). All studied dyes showed strong light absorption in the 350-420 nm range and strongly Stokes-shifted (+100-160 nm) emission with quantum yields (Φf) up to 0.57, whereby the mentioned properties were finely tuned by the type of the terminal cationic substituent and number of styryl components (tetramers being red-shifted in respect to trimers). All studied dyes strongly interacted with ds-DNA and ds-RNA with 1-10 nM-1 affinity, with dye emission being strongly quenched. The tetrameric analogues did not show any particular selectivity between ds-DNA or ds-RNA due to large size and consequent partial, non-selective insertion into DNA/RNA grooves. However, smaller trimeric styryl series showed size-dependent selective stabilization of ds-DNA vs. ds-RNA against thermal denaturation and highly selective or even specific recognition of several particular ds-DNA or ds-RNA structures by induced circular dichroism (ICD) bands. The chiral (ICD) selectivity was controlled by the size of a terminal cationic substituent. All dyes entered efficiently live human cells with negligible cytotoxic activity. Further prospects in the transfer of ICD-based selectivity into fluorescence-chiral methods (FDCD and CPL) is proposed, along with the development of new analogues with red-shifted absorbance properties.
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Affiliation(s)
- Dijana Pavlović Saftić
- Division of Organic Chemistry & Biochemistry, Ruđer Bošković Institute, 10000 Zagreb, Croatia; (D.P.S.); (I.K.K.)
| | - Ivona Krošl Knežević
- Division of Organic Chemistry & Biochemistry, Ruđer Bošković Institute, 10000 Zagreb, Croatia; (D.P.S.); (I.K.K.)
| | - Fernando de Lera Garrido
- Department of Inorganic and Organic Chemistry and Biochemistry, Faculty of Pharmacy, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (F.d.L.G.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
| | - Juan Tolosa
- Department of Inorganic and Organic Chemistry and Biochemistry, Faculty of Pharmacy, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (F.d.L.G.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
| | - Dragomira Majhen
- Division of Molecular Biology, Ruđer Bošković Institute, 10000 Zagreb, Croatia;
| | - Ivo Piantanida
- Division of Organic Chemistry & Biochemistry, Ruđer Bošković Institute, 10000 Zagreb, Croatia; (D.P.S.); (I.K.K.)
| | - Joaquín Calixto García Martínez
- Department of Inorganic and Organic Chemistry and Biochemistry, Faculty of Pharmacy, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (F.d.L.G.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
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Kim BH, Kim W, Kim T, Ko BM, Hong SJ, Lee K, Kim J, Song SH, Lee S. Hydrogen-Bonding-Mediated Molecular Vibrational Suppression for Enhancing the Fluorescence Quantum Yield Applicable for Visual Phenol Detection. ACS APPLIED MATERIALS & INTERFACES 2021; 13:54339-54347. [PMID: 34747615 DOI: 10.1021/acsami.1c15385] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
It is generally accepted that while efficient suppression of molecular vibration is inevitable for purely organic phosphors due to their long emission lifetime in the regime of 1 ms or longer, fluorophores having a lifetime in the nanoseconds regime are not sensitive to collisional quenching. Here, however, we demonstrate that a fluorophore, 2,5-bis(hexyloxy)terephthaldehyde (BHTA), capable of having hydrogen bonding (H bonding) via its two aldehyde groups can have a largely enhanced (450%) fluorescence quantum yield (QY) in amorphous poly(acrylic acid) (PAA) matrix compared to its crystalline powder. We ascribe this enhanced QY to the efficient suppression of molecular vibrations via intermolecular H bonding. We confirm this feasibility by conducting temperature-dependent fluorescence emission intensity measurement. As gaseous phenol can intervene with the H bonding between BHTA and PAA, interestingly, BHTA embedded in PAA can selectively detect gaseous phenol by a sharp fluorescence emission intensity drop that is visibly recognizable by the naked eye. The results provide an insightful molecular design strategy for a fluorophore and fluorometric sensory system design for enhanced photoluminescence QY and convenient detection of various volatile organic compounds.
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Affiliation(s)
- Bo-Hyun Kim
- Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
- Division of Advanced Materials Engineering and Center for Advanced Powder Materials and Parts, Kongju National University, Cheonan 31080, Republic of Korea
| | - Wontae Kim
- Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
| | - Taemin Kim
- Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
| | - Byoung Min Ko
- Division of Advanced Materials Engineering and Center for Advanced Powder Materials and Parts, Kongju National University, Cheonan 31080, Republic of Korea
| | - Soon-Jik Hong
- Division of Advanced Materials Engineering and Center for Advanced Powder Materials and Parts, Kongju National University, Cheonan 31080, Republic of Korea
| | - Kangtaek Lee
- Department of Chemical and Biomolecular Engineering, Yonsei University, Seoul 03722, Republic of Korea
| | - Jinsang Kim
- Department of Materials Science and Engineering, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Sung-Ho Song
- Division of Advanced Materials Engineering and Center for Advanced Powder Materials and Parts, Kongju National University, Cheonan 31080, Republic of Korea
| | - Sunjong Lee
- Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
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Sánchez-Ruiz A, Sousa-Herves A, Tolosa J, Navarro A, García-Martínez JC. Aggregation-Induced Emission Properties in Fully π-Conjugated Polymers, Dendrimers, and Oligomers. Polymers (Basel) 2021; 13:E213. [PMID: 33435293 PMCID: PMC7826689 DOI: 10.3390/polym13020213] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 01/02/2021] [Accepted: 01/05/2021] [Indexed: 12/13/2022] Open
Abstract
Aggregation-Induced Emission (AIE) in organic molecules has recently attracted the attention of the scientific community because of their potential applications in different fields. Compared to small molecules, little attention has been paid to polymers and oligomers that exhibit AIE, despite having excellent properties such as high emission efficiency in aggregate and solid states, signal amplification effect, good processability and the availability of multiple functionalization sites. In addition to these features, if the molecular structure is fully conjugated, intramolecular electronic interactions between the composing chromophores may appear, thus giving rise to a wealth of new photophysical properties. In this review, we focus on selected fully conjugated oligomers, dendrimers and polymers, and briefly summarize their synthetic routes, fluorescence properties and potential applications. An exhaustive comparison between spectroscopic results in solution and aggregates or in solid state has been collected in almost all examples, and an opinion on the future direction of the field is briefly stated.
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Affiliation(s)
- Antonio Sánchez-Ruiz
- Facultad de Farmacia, Departamento de Química Inorgánica Orgánica y Bioquímica, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (A.S.-R.); (A.S.-H.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
| | - Ana Sousa-Herves
- Facultad de Farmacia, Departamento de Química Inorgánica Orgánica y Bioquímica, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (A.S.-R.); (A.S.-H.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
| | - Juan Tolosa
- Facultad de Farmacia, Departamento de Química Inorgánica Orgánica y Bioquímica, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (A.S.-R.); (A.S.-H.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
| | - Amparo Navarro
- Department of Physical and Analytical Chemistry, Faculty of Experimental Sciences, Campus Las Lagunillas, Universidad de Jaén, 23071 Jaén, Spain;
| | - Joaquín C. García-Martínez
- Facultad de Farmacia, Departamento de Química Inorgánica Orgánica y Bioquímica, Universidad de Castilla-La Mancha, C/José María Sánchez Ibáñez s/n, 02008 Albacete, Spain; (A.S.-R.); (A.S.-H.); (J.T.)
- Regional Center for Biomedical Research (CRIB), Universidad de Castilla-La Mancha, C/Almansa 13, 02008 Albacete, Spain
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