1
|
Insights into the Structures of Bilirubin and Biliverdin from Vibrational and Electronic Circular Dichroism: History and Perspectives. Molecules 2023; 28:molecules28062564. [PMID: 36985535 PMCID: PMC10054127 DOI: 10.3390/molecules28062564] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 03/06/2023] [Accepted: 03/08/2023] [Indexed: 03/14/2023] Open
Abstract
In this work we review research activities on a few of the most relevant structural aspects of bilirubin (BR) and biliverdin (BV). Special attention is paid to the exocyclic C=C bonds being in mostly Z rather than E configurations, and to the overall conformation being essentially different for BR and BV due to the presence or absence of the double C=C bond at C-10. In both cases, racemic mixtures of each compound of either M or P configuration are present in achiral solutions; however, imbalance between the two configurations may be easily achieved. In particular, results based on chiroptical spectroscopies, both electronic and vibrational circular dichroism (ECD and VCD) methods, are presented for chirally derivatized BR and BV molecules. Finally, we review deracemization experiments monitored with ECD data from our lab for BR in the presence of serum albumin and anesthetic compounds.
Collapse
|
2
|
Novotná P, Králík F, Urbanová M. Chiral recognition of bilirubin and biliverdin in liposomes and micelles. Biophys Chem 2015; 205:41-50. [PMID: 26071845 DOI: 10.1016/j.bpc.2015.06.001] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2015] [Revised: 05/30/2015] [Accepted: 06/01/2015] [Indexed: 11/25/2022]
Abstract
The structural formula of biologically important chiral pigments bilirubin and biliverdin differs only by one double bond. We showed that this results in dissimilar interactions with two models of membranes: cationic liposomes composed of 3β-[N-(N',N'-dimethylaminoethane)-carbamoyl]cholesterol and zwitterionic micelles from 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS). While the liposomes recognized the P-form of bilirubin, the micelles recognized its M-form. Both recognized the P-form of biliverdin. Our study also comprised ternary systems consisting of the pigments, model membranes and serum albumin (human and bovine). Bilirubin preferentially interacted with the albumins even in the presence of the liposomes. On the other hand, biliverdin preferred the liposomes. Remarkably, the presence of CHAPS completely changed the biliverdin binding to the protein. Because our study was oriented on different chiral interactions, a chiroptical method of electronic circular dichroism was chosen as the principal method to study our systems. As complementary methods, UV-vis absorption and fluorescence emission were used.
Collapse
Affiliation(s)
- Pavlína Novotná
- Department of Analytical Chemistry, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague 6, Czech Republic
| | - František Králík
- Department of Analytical Chemistry, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague 6, Czech Republic
| | - Marie Urbanová
- Department of Physics and Measurements, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague 6, Czech Republic.
| |
Collapse
|
3
|
Novotná P, Urbanová M. Bilirubin, model membranes and serum albumin interaction: The influence of fatty acids. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2015; 1848:1331-40. [DOI: 10.1016/j.bbamem.2015.02.026] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2014] [Revised: 01/31/2015] [Accepted: 02/25/2015] [Indexed: 01/08/2023]
|
4
|
Abbate S, Passarello M, Lebon F, Longhi G, Ruggirello A, Turco Liveri V, Viani F, Castiglione F, Mendola D, Mele A. Chiroptical Phenomena in Reverse Micelles: The Case of (1R,2S)-Dodecyl (2-hydroxy-1-methyl-2-phenylethyl)dimethylammonium Bromide (DMEB). Chirality 2014; 26:532-8. [DOI: 10.1002/chir.22309] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2013] [Accepted: 01/23/2014] [Indexed: 11/10/2022]
Affiliation(s)
- Sergio Abbate
- Dipartimento di Medicina Molecolare e Traslazionale; Università di Brescia; Brescia Italy
- Consorzio Interuniversitario Scienze Fisiche della Materia; Roma Italy
| | - Marco Passarello
- Dipartimento di Medicina Molecolare e Traslazionale; Università di Brescia; Brescia Italy
- Department of Chemistry; Materials and Chemical Engineering “G. Natta,” Politecnico di Milano; Milano Italy
| | - France Lebon
- Dipartimento di Medicina Molecolare e Traslazionale; Università di Brescia; Brescia Italy
- Consorzio Interuniversitario Scienze Fisiche della Materia; Roma Italy
| | - Giovanna Longhi
- Dipartimento di Medicina Molecolare e Traslazionale; Università di Brescia; Brescia Italy
- Consorzio Interuniversitario Scienze Fisiche della Materia; Roma Italy
| | - Angela Ruggirello
- Dipartimento di Chimica; Università degli Studi di Palermo; Palermo Italy
- ISMN; Istituto per lo Studio dei Materiali Nanostrutturati; Palermo Italy
| | - Vincenzo Turco Liveri
- Dipartimento di Chimica; Università degli Studi di Palermo; Palermo Italy
- ISMN; Istituto per lo Studio dei Materiali Nanostrutturati; Palermo Italy
| | - Fiorenza Viani
- Istituto di Chimica del Riconoscimento Molecolare - CNR; Milano Italy
| | - Franca Castiglione
- Department of Chemistry; Materials and Chemical Engineering “G. Natta,” Politecnico di Milano; Milano Italy
| | - Daniele Mendola
- Department of Chemistry; Materials and Chemical Engineering “G. Natta,” Politecnico di Milano; Milano Italy
| | - Andrea Mele
- Department of Chemistry; Materials and Chemical Engineering “G. Natta,” Politecnico di Milano; Milano Italy
- Istituto di Chimica del Riconoscimento Molecolare - CNR; Milano Italy
| |
Collapse
|
5
|
Novotná P, Goncharova I, Urbanová M. Mutual structural effect of bilirubin and model membranes by vibrational circular dichroism. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2014; 1838:831-41. [DOI: 10.1016/j.bbamem.2013.12.005] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2013] [Revised: 12/07/2013] [Accepted: 12/09/2013] [Indexed: 12/20/2022]
|
6
|
Ceccacci F, Giansanti L, Mancini G, Mauceri A, Scipioni A, Sperduto C. Transcription of chirality from molecules to complex systems: the role of hydrophobic interactions. Supramol Chem 2013. [DOI: 10.1080/10610278.2013.822972] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Francesca Ceccacci
- CNR, Istituto d Metodologie Chimiche – Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica Università di Roma Sapienza, P.le Aldo Moro 5, 00165 Rome, Italy
| | - Luisa Giansanti
- Dipartimento di Scienze Fisiche e Chimiche, Università degli Studi dell'Aquila, Via Vetoio Coppito 1, 67100 Coppito L'Aquila, Italy
| | - Giovanna Mancini
- CNR, Istituto d Metodologie Chimiche – Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica Università di Roma Sapienza, P.le Aldo Moro 5, 00165 Rome, Italy
| | - Alessandro Mauceri
- CNR, Istituto d Metodologie Chimiche – Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica Università di Roma Sapienza, P.le Aldo Moro 5, 00165 Rome, Italy
| | - Anita Scipioni
- Dipartimento di Chimica Università di Roma Sapienza, Fondazione Pasteur – Cenci Bolognetti, P.le Aldo Moro 5, 00165 Rome, Italy
| | - Claudio Sperduto
- CNR, Istituto d Metodologie Chimiche – Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica Università di Roma Sapienza, P.le Aldo Moro 5, 00165 Rome, Italy
| |
Collapse
|
7
|
Ospina J, Sorrenti A, Illa O, Pons R, Ortuño RM. New chiral polyfunctional cyclobutane derivatives from (−)-verbenone: possible surfactant behaviour. ACTA ACUST UNITED AC 2013. [DOI: 10.1016/j.tetasy.2013.05.007] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
8
|
Vijay R, Baskar G, Mandal AB, Polavarapu PL. Unprecedented relationship between the size of spherical chiral micellar aggregates and their specific optical rotations. J Phys Chem A 2013; 117:3791-7. [PMID: 23574486 DOI: 10.1021/jp401544g] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Transmission electron microscopy (TEM) images and fluorescence quenching methods indicated that lauryl ester of L-phenylalanine (LEP) and lauryl ester of L-tyrosine (LET) form spherical chiral micelles in the 50-200 mM range and their size increases with concentration. The number of molecules present in these spherical chiral aggregates varied from 80 to 160 for LEP and 80-100 for LET. The specific optical rotation, representing circular birefringence, for LEP at 405 nm and 32 °C is found to increase linearly from 37 deg cc g(-1) dm(-1) for an isolated molecule to 56 deg cc g(-1) dm(-1) for ∼200 nm size aggregate. A similar trend was found for temperatures up to 70 °C and at other visible wavelengths. A linear relation between specific optical rotation and the size of aggregate is also observed for LET. Circular dichroism, as measured in both the visible and infrared wavelength regions, however did not reveal any concentration dependent changes. The unique sensitivity uncovered for specific optical rotation as a function of the size of spherical chiral aggregates is unprecedented and opens new areas of enquiry for physical chemists.
Collapse
Affiliation(s)
- R Vijay
- Department of Chemistry, Vanderbilt University , Nashville, Tennessee 37235, United States
| | | | | | | |
Collapse
|
9
|
Ionescu S, Matei I, Tablet C, Hillebrand M. Theoretical ECD calculations – a useful tool for estimating the conformational change of a ligand in the binding pocket of proteins. Phys Chem Chem Phys 2013; 15:11604-14. [DOI: 10.1039/c3cp50466b] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
10
|
Vijay R, Polavarapu PL. FMOC-Amino Acid Surfactants: Discovery, Characterization and Chiroptical Spectroscopy. J Phys Chem A 2012; 116:10759-69. [DOI: 10.1021/jp308134m] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- R. Vijay
- Department of Chemistry, Vanderbilt University, Nashville, Tennessee 37235, United
States
| | - Prasad L. Polavarapu
- Department of Chemistry, Vanderbilt University, Nashville, Tennessee 37235, United
States
| |
Collapse
|
11
|
Affiliation(s)
- Prasad L. Polavarapu
- Department of Chemistry, Vanderbilt University, Nashville, Tennessee 37235,
United States
| | - R. Vijay
- Department of Chemistry, Vanderbilt University, Nashville, Tennessee 37235,
United States
| |
Collapse
|