Helicity of perfluoroalkyl chains controlled by the self-assembly of the Ala-Ala dipeptides

Supramolecular Engineering of Alkylated, Fluorinated, and Mixed Amphiphiles

The rational design of perfluorinated amphiphiles to control the supramolecular aggregation in aqueous medium is still a key challenge for the engineering of supramolecular architectures. Here we present the synthesis and physical properties of six novel non-ionic amphiphiles. We also studied the effect of mixed alkylated and perfluorinated segments in a single amphiphile and compared it with only alkylated and perfluorinated units. To explore their morphological behavior in aqueous medium, we used dynamic light scattering (DLS) and cryo-TEM/EM measurements. We further confirmed their assembly mechanisms with theoretical investigations, using the Martini model to perform large-scale coarse-grained molecular dynamics simulations. These novel synthesized amphiphiles offer a greater and more systematic understanding of how perfluorinated systems assemble in aqueous medium and suggest new directions for rational designing of new amphiphilic systems and interpreting their assembly process. This article is protected by copyright. All rights reserved.

Helicity control of a perfluorinated carbon chain within a chiral supramolecular cage monitored by VCD

Confinement within supramolecular systems is the leading technology to finely tune guest functional properties. In this communication we report the synthesis of a chiral supramolecular cage able to bias the helicity of a perfluorinated carbon chain hosted within the cage. We monitor the phenomenon of chiral induction by Vibrational Circular Dichroism (VCD) experiments complemented by DFT calculations over the possible conformers.

Self-assembly driven chiral transfer from a dipeptide to the twist and stacking handedness of cyanobiphenylyl groups

The chiral transfer phenomenon was studied on four Ala–Ala lipodipeptides with a cyanobiphenylyl group at the terminal alkyl chain.

Vibrational circular dichroism of D-amino acid-containing peptide NdWFamide in the crystal form

Microcrystals of l-Asn-d-Trp-l-Phe-NH₂ (NdWFamide), a tripeptide derived from Aplysia kurodai that exhibits invertebrate cardiac activity, were evaluated by vibrational circular dichroism (VCD). The chirality of the tryptophan residue at the second position in NdWFamide was associated with the conformation and biological characteristics. The VCD spectrum of NdWFamide was a mirror image of its enantiomer; however, it was significantly different from that of its diastereomer, NWFamide, which is its precursor. The obtained VCD signals of NdWFamide were in good agreement with the VCD signals that were calculated based on the optimized aggregates of NdWFamide, which formed a helical-like backbone conformation. The evaluation of the VCD results revealed the conformation of NdWFamide in the crystalline state and succeeded in distinguishing its stereoisomers. Therefore, this study demonstrates VCD as a useful method for the structural analysis of naturally occurring d-amino acid-containing peptides.

Diketopiperazine Gels: New Horizons from the Self-Assembly of Cyclic Dipeptides

Cyclodipeptides (CDPs) or 2,5-diketopiperazines (DKPs) can exert a variety of biological activities and display pronounced resistance against enzymatic hydrolysis as well as a propensity towards self-assembly into gels, relative to the linear-dipeptide counterparts. They have attracted great interest in a variety of fields spanning from functional materials to drug discovery. This concise review will analyze the latest advancements in their synthesis, self-assembly into gels, and their more innovative applications.

Ala–Ala dipeptides with a semi-perfluoroalkyl chain: chirality driven molecular packing difference and self-assembly driven chiral transfer

The chirality of amino acids triggered the chiral molecular stacking of dipeptides and, eventually, transferred to the semi-perfluoroalkyl chain.