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Mackie M, Le VV, Carstensen HR, Kushnir NR, Castro DL, Dimov IM, Quach KT, Cook SJ, Hobert O, Chalasani SH, Hong RL. Evolution of lateralized gustation in nematodes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.08.31.610597. [PMID: 39282255 PMCID: PMC11398344 DOI: 10.1101/2024.08.31.610597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 09/22/2024]
Abstract
Animals with small nervous systems have a limited number of sensory neurons that must encode information from a changing environment. This problem is particularly exacerbated in nematodes that populate a wide variety of distinct ecological niches but only have a few sensory neurons available to encode multiple modalities. How does sensory diversity prevail within this neuronal constraint? To identify the genetic basis for patterning different nervous systems, we demonstrate that sensory neurons in the Pristionchus pacificus respond to various salt sensory cues in a manner that is partially distinct from that of the distantly related nematode C. elegans . By visualizing neuronal activity patterns, we show that contrary to previous expectations based on its genome sequence, the salt responses of P. pacificus are encoded in a left/right asymmetric manner in the bilateral ASE neuron pair. Our study illustrates patterns of evolutionary stability and change in the gustatory system of nematodes.
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Heiman MG, Bülow HE. Dendrite morphogenesis in Caenorhabditis elegans. Genetics 2024; 227:iyae056. [PMID: 38785371 PMCID: PMC11151937 DOI: 10.1093/genetics/iyae056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Accepted: 04/02/2024] [Indexed: 05/25/2024] Open
Abstract
Since the days of Ramón y Cajal, the vast diversity of neuronal and particularly dendrite morphology has been used to catalog neurons into different classes. Dendrite morphology varies greatly and reflects the different functions performed by different types of neurons. Significant progress has been made in our understanding of how dendrites form and the molecular factors and forces that shape these often elaborately sculpted structures. Here, we review work in the nematode Caenorhabditis elegans that has shed light on the developmental mechanisms that mediate dendrite morphogenesis with a focus on studies investigating ciliated sensory neurons and the highly elaborated dendritic trees of somatosensory neurons. These studies, which combine time-lapse imaging, genetics, and biochemistry, reveal an intricate network of factors that function both intrinsically in dendrites and extrinsically from surrounding tissues. Therefore, dendrite morphogenesis is the result of multiple tissue interactions, which ultimately determine the shape of dendritic arbors.
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Affiliation(s)
- Maxwell G Heiman
- Division of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA
- Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA
| | - Hannes E Bülow
- Department of Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA
- Dominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
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Kanzaki N, Ikeda Y, Shinya R. Onthodiplogaster japonica n. gen., n. sp. (Rhabditida: Diplogastridae) isolated from Onthophagus sp. (Coleoptera: Scarabaeidae) from Japan. Sci Rep 2023; 13:6470. [PMID: 37081071 PMCID: PMC10119125 DOI: 10.1038/s41598-023-33586-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 04/15/2023] [Indexed: 04/22/2023] Open
Abstract
A diplogastrid nematode was isolated from a dung beetle, Onthophagus sp., collected from a rotten mushroom in Kyoto, Japan. The species is characterised by its cheilostomatal shape, separated into 12 narrow plates (rugae), deep stegostom, large ellipsoidal amphids, conical female tail and characteristic receptaculum seminis in the female. Based on its phylogenetic status and stomatal composition, the species is typologically similar to two other diplogastrid genera, Neodiplogaster and Mononchoides. The species can be distinguished from these two genera by the size and shape of the amphid (small pore in Neodiplogaster), female tail shape (long and filiform in Mononchoides) and presence of receptaculum seminis (absence in the two nominal genera), and is described as a monotypic member of a new genus, Onthodiplogaster japonica n. gen., n. sp. Observation of feeding behaviour suggested that O. japonica n. gen., n. sp. does not show clear stomatal dimorphism or polymorphism, which is found in its close relatives, but the species can feed on nematodes (predation), fungi and bacteria. This monomorphic omnivory possibly represents its habitat of dung and other rotten materials, where the environment is biologically divergent, and its condition changes rapidly.
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Affiliation(s)
- Natsumi Kanzaki
- Kansai Research Center, Forestry and Forest Products Research Institute, 68 Nagaikyutaroh, Momoyama, Fushimi, Kyoto, 612-0855, Japan.
| | - Yuya Ikeda
- School of Agriculture, Meiji University, Kawasaki, Kanagawa, 214-8571, Japan
| | - Ryoji Shinya
- School of Agriculture, Meiji University, Kawasaki, Kanagawa, 214-8571, Japan
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Ghorbanzadeh B, Naem S, Farshid AA. Microscopic Study of Mechanoreceptors and Chemoreceptors of Anterior and Posterior Ends of Toxocara Canis Using Scanning Electron Microscopy and Light Microscope. ARCHIVES OF RAZI INSTITUTE 2021; 76:311-322. [PMID: 34223730 PMCID: PMC8410181 DOI: 10.22092/ari.2020.342252.1457] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Accepted: 05/11/2020] [Indexed: 09/30/2022]
Abstract
The present study investigated the fine structure of amphids and phasmids, cuticle, muscles, and digestive tracts of Toxocara canis using optical and electron microscopy, hematoxylin-eosin (H&E) staining, and other specific stains. A number of 38 adult T.canis worms were obtained from the animal shelter of Urmia, and their small intestines were fixated in acidified formal alcohol and 10% formalin solutions. The anterior and posterior parts of male and female T.canis worms were prepared and cut at a thickness of 4-5 μm according to the conventional method in the histological laboratory. The samples were then stained using H&E and specific periodic acid-Schiff, Masson's trichrome, and Orcein staining. The structure of amphid (anterior), phasmid (posterior), cuticle, muscles, and digestive tracts of male and female worms were studied under light microscopy. Basal, intermediate, cortex, and cuticle surface coating of the parasite were visible. Alae were also observed as the thickenings in the cuticle. The muscle layer structure consists of non-branched cylindrical cells. The intestinal tract is composed of cuticular cogs, the esophagus is of filamentous-muscular structure, and the intestine is made of columnar epithelial tissue with microvilli and glycocalyx. The amphid structure consisted of cuticular protrusions with penetrations of the cephalic framework into their inner layers. Phasmid structure also includes protrusions in the cuticle and invagination of sensory neurons. It was concluded that for the most part, the histological structure of the cuticle can be studied by optical microscopy. The muscle structure in this parasite was very similar to the skeletal muscle in mammals. Furthermore, the epithelial structure of the intestine in this parasite was largely similar to the intestinal epithelium in mammals. Finally, regarding the amphid and phasmid structures, it was observed that they were protrusions covered by cuticles where neural, filamentous, and muscular structures were the core of these protrusions.
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Affiliation(s)
- B Ghorbanzadeh
- Department of Pathobiology, Faculty of Veterinary Medicine, Division of Parasitology, Urmia University, Urmia, Iran
| | - S Naem
- Department of Pathobiology, Faculty of Veterinary Medicine, Division of Parasitology, Urmia University, Urmia, Iran
- Department of Pathobiology, Faculty of Veterinary Medicine, Division of Parasitology, Urmia University, Urmia, Iran
| | - A A Farshid
- Department of Pathobiology, Faculty of Veterinary Medicine, Division of Parasitology, Urmia University, Urmia, Iran
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Abstract
Carbon dioxide (CO2) is an important sensory cue for many animals, including both parasitic and free-living nematodes. Many nematodes show context-dependent, experience-dependent and/or life-stage-dependent behavioural responses to CO2, suggesting that CO2 plays crucial roles throughout the nematode life cycle in multiple ethological contexts. Nematodes also show a wide range of physiological responses to CO2. Here, we review the diverse responses of parasitic and free-living nematodes to CO2. We also discuss the molecular, cellular and neural circuit mechanisms that mediate CO2 detection in nematodes, and that drive context-dependent and experience-dependent responses of nematodes to CO2.
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Hong RL, Riebesell M, Bumbarger DJ, Cook SJ, Carstensen HR, Sarpolaki T, Cochella L, Castrejon J, Moreno E, Sieriebriennikov B, Hobert O, Sommer RJ. Evolution of neuronal anatomy and circuitry in two highly divergent nematode species. eLife 2019; 8:47155. [PMID: 31526477 PMCID: PMC6748829 DOI: 10.7554/elife.47155] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 08/12/2019] [Indexed: 11/17/2022] Open
Abstract
The nematodes C. elegans and P. pacificus populate diverse habitats and display distinct patterns of behavior. To understand how their nervous systems have diverged, we undertook a detailed examination of the neuroanatomy of the chemosensory system of P. pacificus. Using independent features such as cell body position, axon projections and lipophilic dye uptake, we have assigned homologies between the amphid neurons, their first-layer interneurons, and several internal receptor neurons of P. pacificus and C. elegans. We found that neuronal number and soma position are highly conserved. However, the morphological elaborations of several amphid cilia are different between them, most notably in the absence of ‘winged’ cilia morphology in P. pacificus. We established a synaptic wiring diagram of amphid sensory neurons and amphid interneurons in P. pacificus and found striking patterns of conservation and divergence in connectivity relative to C. elegans, but very little changes in relative neighborhood of neuronal processes. These findings demonstrate the existence of several constraints in patterning the nervous system and suggest that major substrates for evolutionary novelty lie in the alterations of dendritic structures and synaptic connectivity. Nerve cells, also called neurons, are responsible both for sensing signals from the environment and for determining how organisms react. This means that the unique features of an animal’s nervous system underpin its characteristic behaviors. Comparing the anatomy of the nervous systems in different animals could therefore yield valuable insights into how structural and behavioral differences emerge over time. Behavioral variation often occurs even in similar-looking animals. One example is a group of microscopic worms, called nematodes. Although many nematode species exist, their overall body plans are the same, and the worms of each species contain a fixed number of cells. Despite these apparent similarities, different species of nematodes inhabit a variety of environments and may respond differently to the same signals. The main sensory organs in nematodes are called the amphid sensilla. They are used to detect chemicals, as well as other inputs from the environment such as temperature and pheromones from other nematodes. Although researchers have often speculated that the number of cells in these organs and their arrangement are broadly the same across species, their anatomy had not been studied in detail. Hong, Riebesell et al. compared the detailed structure and genetic features of the sensory systems in two distantly related species of nematode worms, Pristionchus pacificus and Caenorhabditis elegans. These two species behave in different ways, for example, P. pacificus is usually found in association with different species of beetles, while C. elegans is free-living and usually found on rotting fruit. By comparing the two, Hong, Riebesell et al. wanted to determine whether the diverse behaviors observed in the two species could be determined by differences between their sensory systems. Experiments using electron microscopy yielded several thousand high resolution images spanning the entire sensory organ. These images were then used to create detailed reconstructions of the sensory nervous system in each worm species, demonstrating that both species had the same number of sensory nerve cells, allowing one-to-one comparisons between them. Further analysis showed that while the overall structure of the neuronal connections remains the same between the two species, the neurons in P. pacificus made more diverse connections than those in C. elegans. Detailed studies of gene activity also revealed that neurons in each species switched on a slightly different group of genes, possibly indicating that each type of worm processes sensory signals in different ways. These results shed new light on how nervous systems in related species can change over time without any change in neuron count. In the future, a better understanding of these changes could link the evolution of the nervous system to the emergence of different behaviors, in both simple and more complex organisms.
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Affiliation(s)
- Ray L Hong
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany.,Department of Biology, California State University, Northridge, Northridge, United States
| | - Metta Riebesell
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany
| | - Daniel J Bumbarger
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany
| | - Steven J Cook
- Department of Biological Sciences, Columbia University, New York, United States
| | - Heather R Carstensen
- Department of Biology, California State University, Northridge, Northridge, United States
| | - Tahmineh Sarpolaki
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany
| | - Luisa Cochella
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria
| | - Jessica Castrejon
- Department of Biology, California State University, Northridge, Northridge, United States
| | - Eduardo Moreno
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany
| | - Bogdan Sieriebriennikov
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany
| | - Oliver Hobert
- Department of Biological Sciences, Columbia University, New York, United States.,Howard Hughes Medical Institute, Chevy Chase, United States
| | - Ralf J Sommer
- Department for Integrative Evolutionary Biology, Max-Planck Institute for Developmental Biology, Tuebingen, Germany
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7
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Yip ZC, Heiman MG. Ordered arrangement of dendrites within a C. elegans sensory nerve bundle. eLife 2018; 7:e35825. [PMID: 30117807 PMCID: PMC6133548 DOI: 10.7554/elife.35825] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Accepted: 08/14/2018] [Indexed: 01/06/2023] Open
Abstract
Biological systems are organized into well-ordered structures and can evolve new patterns when perturbed. To identify principles underlying biological order, we turned to C. elegans for its simple anatomy and powerful genetics. We developed a method to quantify the arrangement of three dendrites in the main sensory nerve bundle, and found that they exhibit a stereotyped arrangement throughout larval growth. Dendrite order does not require prominent features including sensory cilia and glial junctions. In contrast, loss of the cell adhesion molecule (CAM) CDH-4/Fat-like cadherin causes dendrites to be ordered randomly, despite remaining bundled. Loss of the CAMs PTP-3/LAR or SAX-7/L1CAM causes dendrites to adopt an altered order, which becomes increasingly random as animals grow. Misexpression of SAX-7 leads to subtle but reproducible changes in dendrite order. Our results suggest that combinations of CAMs allow dendrites to self-organize into a stereotyped arrangement and can produce altered patterns when perturbed.
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Affiliation(s)
- Zhiqi Candice Yip
- Division of Genetics and GenomicsBoston Children’s HospitalBostonUnited States
- Department of GeneticsHarvard Medical SchoolBostonUnited States
| | - Maxwell G Heiman
- Division of Genetics and GenomicsBoston Children’s HospitalBostonUnited States
- Department of GeneticsHarvard Medical SchoolBostonUnited States
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8
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Henne S, Sombke A, Schmidt-Rhaesa A. Immunohistochemical analysis of the anterior nervous system of the free-living nematode Plectus spp. (Nematoda, Plectidae). ZOOMORPHOLOGY 2017. [DOI: 10.1007/s00435-017-0347-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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9
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Ultrastructural immunogold localization of major sperm protein (MSP) in spermatogenic cells of the nematode Acrobeles complexus (Nematoda, Rhabditida). Micron 2016; 89:43-55. [DOI: 10.1016/j.micron.2016.07.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Revised: 07/14/2016] [Accepted: 07/14/2016] [Indexed: 01/07/2023]
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10
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Han Z, Boas S, Schroeder NE. Unexpected Variation in Neuroanatomy among Diverse Nematode Species. Front Neuroanat 2016; 9:162. [PMID: 26778973 PMCID: PMC4700257 DOI: 10.3389/fnana.2015.00162] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2015] [Accepted: 11/30/2015] [Indexed: 12/31/2022] Open
Abstract
Nematodes are considered excellent models for understanding fundamental aspects of neuron function. However, nematodes are less frequently used as models for examining the evolution of nervous systems. While the habitats and behaviors of nematodes are diverse, the neuroanatomy of nematodes is often considered highly conserved. A small number of nematode species greatly influences our understanding of nematode neurobiology. The free-living species Caenorhabditis elegans and, to a lesser extent, the mammalian gastrointestinal parasite Ascaris suum are, historically, the primary sources of knowledge regarding nematode neurobiology. Despite differences in size and habitat, C. elegans and A. suum share a surprisingly similar neuroanatomy. Here, we examined species across several clades in the phylum Nematoda and show that there is a surprising degree of neuroanatomical variation both within and among nematode clades when compared to C. elegans and Ascaris. We found variation in the numbers of neurons in the ventral nerve cord and dye-filling pattern of sensory neurons. For example, we found that Pristionchus pacificus, a bacterial feeding species used for comparative developmental research had 20% fewer ventral cord neurons compared to C. elegans. Steinernema carpocapsae, an insect-parasitic nematode capable of jumping behavior, had 40% more ventral cord neurons than C. elegans. Interestingly, the non-jumping congeneric nematode, S. glaseri showed an identical number of ventral cord neurons as S. carpocapsae. There was also variability in the timing of neurodevelopment of the ventral cord with two of five species that hatch as second-stage juveniles showing delayed neurodevelopment. We also found unexpected variation in the dye-filling of sensory neurons among examined species. Again, sensory neuron dye-filling pattern did not strictly correlate with phylogeny. Our results demonstrate that variation in nematode neuroanatomy is more prevalent than previously assumed and recommend this diverse phylum for future "evo-devo-neuro" studies.
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Affiliation(s)
- Ziduan Han
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana IL, USA
| | - Stephanie Boas
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana IL, USA
| | - Nathan E Schroeder
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, UrbanaIL, USA; Neuroscience Program, University of Illinois at Urbana-Champaign, UrbanaIL, USA
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Bert W, Slos D, Leroux O, Claeys M. Cryo-fixation and associated developments in transmission electron microscopy: a cool future for nematology. NEMATOLOGY 2016. [DOI: 10.1163/15685411-00002943] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
At present, the importance of sample preparation equipment for electron microscopy represents the driving force behind major breakthroughs in microscopy and cell biology. In this paper we present an introduction to the most commonly used cryo-fixation techniques, with special attention paid towards high-pressure freezing followed by freeze substitution. Techniques associated with cryo-fixation, such as immunolocalisation, cryo-sectioning, and correlative light and electron microscopy, are also highlighted. For studies that do not require high resolution, high quality results, or the immediate arrest of certain processes, conventional methods will provide answers to many questions. For some applications, such as immunocytochemistry, three-dimensional reconstruction of serial sections or electron tomography, improved preservation of the ultrastructure is required. This review of nematode cryo-fixation highlights that cryo-fixation not only results in a superior preservation of fine structural details, but also underlines the fact that some observations based on results solely obtained through conventional fixation approaches were either incorrect, or otherwise had severe limitations. Although the use of cryo-fixation has hitherto been largely restricted to model organisms, the advantages of cryo-fixation are sufficiently self-evident that we must conclude that the cryo-fixation method is highly likely to become the standard for nematode fixation in the near future.
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Affiliation(s)
- Wim Bert
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
| | - Dieter Slos
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
| | - Olivier Leroux
- Pteridology Research Group, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
| | - Myriam Claeys
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
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Qing X, Sánchez-Monge A, Janssen T, Couvreur M, Bert W. Description of Malenchus sexlineatus n. sp., new records of three known species of Malenchus Andrássy, 1968 (Nematoda: Tylenchidae) and notes on amphidial aperture development. NEMATOLOGY 2016. [DOI: 10.1163/15685411-00002951] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
A new species, Malenchus sexlineatus n. sp., discovered from the Philippines, is described based on morphological and molecular data. The new species is unusual in the genus by having six lateral lines. Malenchus sexlineatus n. sp. is distinguished from M. williamsi, the only other species in the genus with six lateral lines (based on currently available SEM data), by a shorter body of 278 (270-288) vs 452 (425-495) μm, shorter stylet (7.0 (6.2-7.5) vs 11-12 μm), narrower annulations (0.8 (0.7-0.8) vs 1.2-1.6 μm), lateral field comprising one elevated ridge in LM vs six well-separated incisures (resembling the lateral lines in Cephalenchus) in LM, the presence of S-shaped vs straight amphidial apertures, and vulval flaps absent or only one annuli long vs distinct. By having an exceptionally short body, M. sexlineatus n. sp. comes close to M. parvus, M. bryanti and M. acarayensis. However, there are significant differences in the lateral lines, annuli width and most morphometric ratios. Three known species, namely M. exiguus, M. nanellus and M. pachycephalus, all being first records and first representative from China, are characterised by morphological data. The new species was placed in a robustly supported clade containing two other Malenchus spp. and M. exiguus. Interestingly, M. pressulus was placed in a separate, unresolved phylogenetic position. However, the phylogenetic position of these clades could not be resolved within Tylenchidae. The shapes of the amphidial aperture and fovea within Malenchus are also compared and its possible developmental process is illustrated and discussed.
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Affiliation(s)
- Xue Qing
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
| | - Alcides Sánchez-Monge
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
- Universidad de Costa Rica, Escuela de Estudios Generales, 2060, San José, Costa Rica
| | - Toon Janssen
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
| | - Marjolein Couvreur
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
| | - Wim Bert
- Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
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Structure, Distribution, and Function of Neuronal/Synaptic Spinules and Related Invaginating Projections. Neuromolecular Med 2015; 17:211-40. [PMID: 26007200 DOI: 10.1007/s12017-015-8358-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2015] [Accepted: 05/08/2015] [Indexed: 10/23/2022]
Abstract
Neurons and especially their synapses often project long thin processes that can invaginate neighboring neuronal or glial cells. These "invaginating projections" can occur in almost any combination of postsynaptic, presynaptic, and glial processes. Invaginating projections provide a precise mechanism for one neuron to communicate or exchange material exclusively at a highly localized site on another neuron, e.g., to regulate synaptic plasticity. The best-known types are postsynaptic projections called "spinules" that invaginate into presynaptic terminals. Spinules seem to be most prevalent at large very active synapses. Here, we present a comprehensive review of all kinds of invaginating projections associated with both neurons in general and more specifically with synapses; we describe them in all animals including simple, basal metazoans. These structures may have evolved into more elaborate structures in some higher animal groups exhibiting greater synaptic plasticity. In addition to classic spinules and filopodial invaginations, we describe a variety of lesser-known structures such as amphid microvilli, spinules in giant mossy terminals and en marron/brush synapses, the highly specialized fish retinal spinules, the trophospongium, capitate projections, and fly gnarls, as well as examples in which the entire presynaptic or postsynaptic process is invaginated. These various invaginating projections have evolved to modify the function of a particular synapse, or to channel an effect to one specific synapse or neuron, without affecting those nearby. We discuss how they function in membrane recycling, nourishment, and cell signaling and explore how they might change in aging and disease.
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14
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Smythe AB. Evolution of Feeding Structures in the Marine Nematode Order Enoplida. Integr Comp Biol 2015; 55:228-40. [PMID: 25987716 DOI: 10.1093/icb/icv043] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Marine nematodes of the order Enoplida may represent the earliest lineage of nematodes and have a variety of fixed and movable feeding structures in their stomas. This study used an 18S ribosomal RNA phylogeny of the orders Enoplida and Triplonchida (subclass Enoplia) to explore the evolution of these feeding structures in light of previous hypotheses based solely on morphology. The Enoplida and Triplonchida were found to be paraphyletic, as several taxa currently classified as Triplonchida, such as Rhabdodemania, were found to be part of the Enoplida clade. The position of Rhabdodemania within Enoplida was unclear, but a close relation to Enoplidae and Thoracostomopsidae was not supported, making it unlikely that its movable odontia are homologous with the mandibles of these families. A member of Anticomidae was well-supported as the base of the clade containing Phanodermatidae, Enoplidae, and Thoracostomopsidae, suggesting that taxa with buccal rods and mandibles evolved from nematodes with unarmed stomas. The Phanodermatidae were shown to be more closely related to the Enoplidae and Thoracostomopsidae than were the Leptosomatidae, suggesting that the buccal rods of the phanoderms (rather than the mandibular ridge/odontia complex of the Leptosomatidae), may be the origin of the mandibles.
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Affiliation(s)
- Ashleigh B Smythe
- Department of Biology, Virginia Military Institute, Lexington, VA 24450, USA
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15
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Qing X, Sánchez-Monge A, Bert W. Three-dimensional modelling and printing as tools to enhance education and research in Nematology. NEMATOLOGY 2015. [DOI: 10.1163/15685411-00002932] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Affiliation(s)
- Xue Qing
- Nematology Research Unit, Department of Biology, Ghent University, Ledeganckstraat 35, B-9000 Ghent, Belgium
| | - Alcides Sánchez-Monge
- Nematology Research Unit, Department of Biology, Ghent University, Ledeganckstraat 35, B-9000 Ghent, Belgium
- Universidad de Costa Rica, Escuela de Estudios Generales, 2060, Costa Rica
| | - Wim Bert
- Nematology Research Unit, Department of Biology, Ghent University, Ledeganckstraat 35, B-9000 Ghent, Belgium
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16
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Abstract
Nearly all animals are capable of sensing changes in environmental oxygen (O2) and carbon dioxide (CO2) levels, which can signal the presence of food, pathogens, conspecifics, predators, or hosts. The free-living nematode Caenorhabditis elegans is a powerful model system for the study of gas sensing. C. elegans detects changes in O2 and CO2 levels and integrates information about ambient gas levels with other internal and external cues to generate context-appropriate behavioral responses. Due to its small nervous system and amenability to genetic and genomic analyses, the functional properties of its gas-sensing microcircuits can be dissected with single-cell resolution, and signaling molecules and natural genetic variations that modulate gas responses can be identified. Here, we discuss the neural basis of gas sensing in C. elegans, and highlight changes in gas-evoked behaviors in the context of other sensory cues and natural genetic variations. We also discuss gas sensing in other free-living nematodes and parasitic nematodes, focusing on how gas-sensing behavior has evolved to mediate species-specific behavioral requirements.
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Dillman AR, Minor PJ, Sternberg PW. Origin and evolution of dishevelled. G3 (BETHESDA, MD.) 2013; 3:251-62. [PMID: 23390601 PMCID: PMC3564985 DOI: 10.1534/g3.112.005314] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2012] [Accepted: 12/09/2012] [Indexed: 12/31/2022]
Abstract
Dishevelled (Dsh or Dvl) is an important signaling protein, playing a key role in Wnt signaling and relaying cellular information for several developmental pathways. Dsh is highly conserved among metazoans and has expanded into a multigene family in most bilaterian lineages, including vertebrates, planarians, and nematodes. These orthologs, where explored, are known to have considerable overlap in function, but evidence for functional specialization continues to mount. We performed a comparative analysis of Dsh across animals to explore protein architecture and identify conserved and divergent features that could provide insight into functional specialization with an emphasis on invertebrates, especially nematodes. We find evidence of dynamic evolution of Dsh, particularly among nematodes, with taxa varying in ortholog number from one to three. We identify a new domain specific to some nematode lineages and find an unexpected nuclear localization signal conserved in many Dsh orthologs. Our findings raise questions of protein evolution in general and provide clues as to how animals have dealt with the complex intricacies of having a protein, such as Dsh, act as a central messenger hub connected to many different and vitally important pathways. We discuss our findings in the context of functional specialization and bring many testable hypotheses to light.
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Affiliation(s)
| | | | - Paul W. Sternberg
- Howard Hughes Medical Institute, Division of Biology, California Institute of Technology, Pasadena, California 91125
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19
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Zhu H, Li J, Nolan TJ, Schad GA, Lok JB. Sensory neuroanatomy of Parastrongyloides trichosuri, a nematode parasite of mammals: Amphidial neurons of the first-stage larva. J Comp Neurol 2011; 519:2493-507. [PMID: 21456026 PMCID: PMC3125480 DOI: 10.1002/cne.22637] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Owing to its ability to switch between free-living and parasitic modes of development, Parastrongyloides trichosuri represents a valuable model with which to study the evolution of parasitism among the nematodes, especially aspects pertaining to morphogenesis of infective third-stage larvae. In the free-living nematode Caenorhabditis elegans, developmental fates of third-stage larvae are determined in part by environmental cues received by chemosensory neurons in the amphidial sensillae. As a basis for comparative study, we have described the neuroanatomy of the amphidial sensillae of P. trichosuri. By using computational methods, we incorporated serial electron micrographs into a three-dimensional reconstruction of the amphidial neurons of this parasite. Each amphid is innervated by 13 neurons, and the dendritic processes of 10 of these extend nearly to the amphidial pore. Dendritic processes of two specialized neurons leave the amphidial channel and terminate within invaginations of the sheath cell. One of these is similar to the finger cell of C. elegans, terminating in digitiform projections. The other projects a single cilium into the sheath cell. The dendritic process of a third specialized neuron terminates within the tight junction of the amphid. Each amphidial neuron was traced from the tip of its dendrite(s) to its cell body in the lateral ganglion. Positions of these cell bodies approximate those of morphologically similar amphidial neurons in Caenorhabditis elegans, so the standard nomenclature for amphidial neurons in C. elegans was adopted. A map of cell bodies within the lateral ganglion of P. trichosuri was prepared to facilitate functional study of these neurons.
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Affiliation(s)
- He Zhu
- Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - Jian Li
- Department of Neurology, School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - Thomas J. Nolan
- Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - Gerhard A. Schad
- Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - James B. Lok
- Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
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Wang D, Jones LM, Urwin PE, Atkinson HJ. A synthetic peptide shows retro- and anterograde neuronal transport before disrupting the chemosensation of plant-pathogenic nematodes. PLoS One 2011; 6:e17475. [PMID: 21408216 PMCID: PMC3049761 DOI: 10.1371/journal.pone.0017475] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2010] [Accepted: 02/03/2011] [Indexed: 12/05/2022] Open
Abstract
Cyst nematodes are a group of plant pathogens each with a defined host range that cause major losses to crops including potato, soybean and sugar beet. The infective mobile stage hatches from dormant eggs and moves a short distance through the soil to plant roots, which it then invades. A novel strategy for control has recently been proposed in which the plant is able to secrete a peptide which disorientates the infective stage and prevents invasion of the pathogen. This study provides indirect evidence to support the mechanism by which one such peptide disrupts chemosensory function in nematodes. The peptide is a disulphide-constrained 7-mer with the amino acid sequence CTTMHPRLC that binds to nicotinic acetylcholine receptors. A fluorescently tagged version of this peptide with both epifluorescent and confocal microscopy was used to demonstrate that retrograde transport occurs from an aqueous environment along bare-ending primary cilia of chemoreceptive sensilla. The peptide is transported to the cell bodies of these neurons and on to a limited number of other neurons to which they connect. It appears to be localised in both neuronal processes and organelles adjacent to nuclei of some neurons suggesting it could be transported through the Golgi apparatus. The peptide takes 2.5 h to reach the neuronal cell bodies. Comparative studies established that similar but less abundant uptake occurs for Caenorhabditis elegans along its well studied dye-filling chemoreceptive neurons. Incubation in peptide solution or root-exudate from transgenic plants that secrete the peptide disrupted normal orientation of infective cyst nematodes to host root diffusate. The peptide probably undergoes transport along the dye-filling non-cholinergic chemoreceptive neurons to their synapses where it is taken up by the interneurons to which they connect. Coordinated responses to chemoreception are disrupted when the sub-set of cholinergic interneurons secrete the peptide at synapses that have post-synaptic nicotinic acetylcholine receptors.
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Affiliation(s)
- Dong Wang
- Centre for Plant Science, University of Leeds, Leeds, United Kingdom
| | - Laura M. Jones
- Centre for Plant Science, University of Leeds, Leeds, United Kingdom
| | - Peter E. Urwin
- Centre for Plant Science, University of Leeds, Leeds, United Kingdom
- * E-mail:
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Hallem EA, Dillman AR, Hong AV, Zhang Y, Yano JM, DeMarco SF, Sternberg PW. A sensory code for host seeking in parasitic nematodes. Curr Biol 2011; 21:377-83. [PMID: 21353558 DOI: 10.1016/j.cub.2011.01.048] [Citation(s) in RCA: 125] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2010] [Revised: 12/29/2010] [Accepted: 01/20/2011] [Indexed: 02/08/2023]
Abstract
Parasitic nematode species often display highly specialized host-seeking behaviors that reflect their specific host preferences. Many such behaviors are triggered by host odors, but little is known about either the specific olfactory cues that trigger these behaviors or the underlying neural circuits. Heterorhabditis bacteriophora and Steinernema carpocapsae are phylogenetically distant insect-parasitic nematodes whose host-seeking and host-invasion behavior resembles that of some devastating human- and plant-parasitic nematodes. We compare the olfactory responses of Heterorhabditis and Steinernema infective juveniles (IJs) to those of Caenorhabditis elegans dauers, which are analogous life stages. The broad host range of these parasites results from their ability to respond to the universally produced signal carbon dioxide (CO(2)), as well as a wide array of odors, including host-specific odors that we identified using thermal desorption-gas chromatography-mass spectroscopy. We find that CO(2) is attractive for the parasitic IJs and C. elegans dauers despite being repulsive for C. elegans adults, and we identify a sensory neuron that mediates CO(2) response in both parasitic and free-living species, regardless of whether CO(2) is attractive or repulsive. The parasites' odor response profiles are more similar to each other than to that of C. elegans despite their greater phylogenetic distance, likely reflecting evolutionary convergence to insect parasitism.
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Affiliation(s)
- Elissa A Hallem
- Howard Hughes Medical Institute, Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA
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22
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Ragsdale EJ, Baldwin JG. Resolving phylogenetic incongruence to articulate homology and phenotypic evolution: a case study from Nematoda. Proc Biol Sci 2010; 277:1299-307. [PMID: 20106846 PMCID: PMC2871949 DOI: 10.1098/rspb.2009.2195] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2009] [Accepted: 01/06/2010] [Indexed: 11/12/2022] Open
Abstract
Modern morphology-based systematics, including questions of incongruence with molecular data, emphasizes analysis over similarity criteria to assess homology. Yet detailed examination of a few key characters, using new tools and processes such as computerized, three-dimensional ultrastructural reconstruction of cell complexes, can resolve apparent incongruence by re-examining primary homologies. In nematodes of Tylenchomorpha, a parasitic feeding phenotype is thus reconciled with immediate free-living outgroups. Closer inspection of morphology reveals phenotypes congruent with molecular-based phylogeny and points to a new locus of homology in mouthparts. In nematode models, the study of individually homologous cells reveals a conserved modality of evolution among dissimilar feeding apparati adapted to divergent lifestyles. Conservatism of cellular components, consistent with that of other body systems, allows meaningful comparative morphology in difficult groups of microscopic organisms. The advent of phylogenomics is synergistic with morphology in systematics, providing an honest test of homology in the evolution of phenotype.
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Affiliation(s)
- Erik J Ragsdale
- Department of Nematology, University of California, Riverside, CA 92521, USA.
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Ragsdale EJ, Ngo PT, Crum J, Ellisman MH, Baldwin JG. Comparative, three-dimensional anterior sensory reconstruction of Aphelenchus avenae (nematoda: Tylenchomorpha). J Comp Neurol 2010; 517:616-32. [PMID: 19824103 DOI: 10.1002/cne.22170] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
The anterior sensory anatomy (not including amphids) of the nematode Aphelenchus avenae (Tylenchomorpha) has been three-dimensionally reconstructed from serial, transmission electron microscopy thin sections. Models, showing detailed morphology and spatial relationships of cuticular sensilla and internal sensory receptors, are the first computerized reconstruction of sensory structures of a Tylenchomorpha nematode. Results are analyzed with respect to similarly detailed reconstructions of Rhabditida outgroup nematodes, Acrobeles complexus (Cephalobomorpha) and Caenorhabditis elegans (Rhabditomorpha). Homologies identified in A. avenae demonstrate the general conservation of the anterior sensory system between freeliving nematodes and the largely plant parasitic Tylenchomorpha. A higher degree of similarity is shown between A. avenae and A. complexus, with common features including: the presence of a second, internal outer labial dendrite (OL1); a second cephalic dendrite in the female (CEP2/CEM); an accessory process loop of inner labial dendrite 1; and terminus morphology and epidermal associations of internal sensory receptors BAG and URX. Unique to A. avenae is a pair of peripheral, lateral neurons of unknown homology but with axial positions and intercellular relationships nearly identical to the "posterior branches" of URX in A. complexus. Knowledge of homologies and connectivity of anterior sensory structures provides a basis for expansion of the experimental behavioral model of C. elegans to the economically important nematodes of Tylenchomorpha.
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Affiliation(s)
- Erik J Ragsdale
- Department of Nematology, University of California, Riverside, California 92521, USA.
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