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Eilertsen M, Dolan DWP, Bolton CM, Karlsen R, Davies WIL, Edvardsen RB, Furmanek T, Sveier H, Migaud H, Helvik JV. Photoreception and transcriptomic response to light during early development of a teleost with a life cycle tightly controlled by seasonal changes in photoperiod. PLoS Genet 2022; 18:e1010529. [PMID: 36508414 PMCID: PMC9744326 DOI: 10.1371/journal.pgen.1010529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 11/15/2022] [Indexed: 12/14/2022] Open
Abstract
Light cues vary along the axis of periodicity, intensity and spectrum and perception of light is dependent on the photoreceptive capacity encoded within the genome and the opsins expressed. A global approach was taken to analyze the photoreceptive capacity and the effect of differing light conditions on a developing teleost prior to first feeding. The transcriptomes of embryos and alevins of Atlantic salmon (Salmo salar) exposed to different light conditions were analyzed, including a developmental series and a circadian profile. The results showed that genes mediating nonvisual photoreception are present prior to hatching when the retina is poorly differentiated. The clock genes were expressed early, but the circadian profile showed that only two clock genes were significantly cycling before first feeding. Few genes were differentially expressed between day and night within a light condition; however, many genes were significantly different between light conditions, indicating that light environment has an impact on the transcriptome during early development. Comparing the transcriptome data from constant conditions to periodicity of white light or different colors revealed overrepresentation of genes related to photoreception, eye development, muscle contraction, degradation of metabolites and cell cycle among others, and in constant light, several clock genes were upregulated. In constant white light and periodicity of green light, genes associated with DNA replication, chromatin remodeling, cell division and DNA repair were downregulated. The study implies a direct influence of light conditions on the transcriptome profile at early developmental stages, by a complex photoreceptive system where few clock genes are cycling.
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Affiliation(s)
- Mariann Eilertsen
- Department of Biological Sciences, University of Bergen, Bergen, Norway
- * E-mail: (ME); (JVH)
| | | | - Charlotte M. Bolton
- Institute of Aquaculture, University of Stirling, Stirling, Scotland, United Kingdom
| | - Rita Karlsen
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Wayne I. L. Davies
- Umeå Centre for Molecular Medicine, Umeå University, Umeå, Sweden
- School of Life Sciences, College of Science, Health and Engineering, La Trobe University, Melbourne, Australia
| | | | | | | | - Herve Migaud
- Institute of Aquaculture, University of Stirling, Stirling, Scotland, United Kingdom
| | - Jon Vidar Helvik
- Department of Biological Sciences, University of Bergen, Bergen, Norway
- * E-mail: (ME); (JVH)
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Eilertsen M, Davies WIL, Patel D, Barnes JE, Karlsen R, Mountford JK, Stenkamp DL, Patel JS, Helvik JV. An EvoDevo Study of Salmonid Visual Opsin Dynamics and Photopigment Spectral Sensitivity. Front Neuroanat 2022; 16:945344. [PMID: 35899127 PMCID: PMC9309310 DOI: 10.3389/fnana.2022.945344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Accepted: 06/23/2022] [Indexed: 11/29/2022] Open
Abstract
Salmonids are ideal models as many species follow a distinct developmental program from demersal eggs and a large yolk sac to hatching at an advanced developmental stage. Further, these economically important teleosts inhabit both marine- and freshwaters and experience diverse light environments during their life histories. At a genome level, salmonids have undergone a salmonid-specific fourth whole genome duplication event (Ss4R) compared to other teleosts that are already more genetically diverse compared to many non-teleost vertebrates. Thus, salmonids display phenotypically plastic visual systems that appear to be closely related to their anadromous migration patterns. This is most likely due to a complex interplay between their larger, more gene-rich genomes and broad spectrally enriched habitats; however, the molecular basis and functional consequences for such diversity is not fully understood. This study used advances in genome sequencing to identify the repertoire and genome organization of visual opsin genes (those primarily expressed in retinal photoreceptors) from six different salmonids [Atlantic salmon (Salmo salar), brown trout (Salmo trutta), Chinook salmon (Oncorhynchus tshawytcha), coho salmon (Oncorhynchus kisutch), rainbow trout (Oncorhynchus mykiss), and sockeye salmon (Oncorhynchus nerka)] compared to the northern pike (Esox lucius), a closely related non-salmonid species. Results identified multiple orthologues for all five visual opsin classes, except for presence of a single short-wavelength-sensitive-2 opsin gene. Several visual opsin genes were not retained after the Ss4R duplication event, which is consistent with the concept of salmonid rediploidization. Developmentally, transcriptomic analyzes of Atlantic salmon revealed differential expression within each opsin class, with two of the long-wavelength-sensitive opsins not being expressed before first feeding. Also, early opsin expression in the retina was located centrally, expanding dorsally and ventrally as eye development progressed, with rod opsin being the dominant visual opsin post-hatching. Modeling by spectral tuning analysis and atomistic molecular simulation, predicted the greatest variation in the spectral peak of absorbance to be within the Rh2 class, with a ∼40 nm difference in λ max values between the four medium-wavelength-sensitive photopigments. Overall, it appears that opsin duplication and expression, and their respective spectral tuning profiles, evolved to maximize specialist color vision throughout an anadromous lifecycle, with some visual opsin genes being lost to tailor marine-based vision.
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Affiliation(s)
- Mariann Eilertsen
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Wayne Iwan Lee Davies
- Umeå Centre for Molecular Medicine, Umeå University, Umeå, Sweden
- School of Life Sciences, College of Science, Health and Engineering, La Trobe University, Melbourne, VIC, Australia
| | - Dharmeshkumar Patel
- Institute for Modeling Collaboration and Innovation (IMCI), University of Idaho, Moscow, ID, United States
| | - Jonathan E. Barnes
- Institute for Modeling Collaboration and Innovation (IMCI), University of Idaho, Moscow, ID, United States
| | - Rita Karlsen
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Jessica Kate Mountford
- School of Life Sciences, College of Science, Health and Engineering, La Trobe University, Melbourne, VIC, Australia
- Lions Eye Institute, University of Western Australia, Perth, WA, Australia
| | - Deborah L. Stenkamp
- Department of Biological Sciences, University of Idaho, Moscow, ID, United States
- Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, ID, United States
| | - Jagdish Suresh Patel
- Institute for Modeling Collaboration and Innovation (IMCI), University of Idaho, Moscow, ID, United States
- Department of Biological Sciences, University of Idaho, Moscow, ID, United States
| | - Jon Vidar Helvik
- Department of Biological Sciences, University of Bergen, Bergen, Norway
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Dekens MPS, Fontinha BM, Gallach M, Pflügler S, Tessmar‐Raible K. Melanopsin elevates locomotor activity during the wake state of the diurnal zebrafish. EMBO Rep 2022; 23:e51528. [PMID: 35233929 PMCID: PMC9066073 DOI: 10.15252/embr.202051528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2020] [Revised: 01/24/2022] [Accepted: 02/04/2022] [Indexed: 11/28/2022] Open
Abstract
Mammalian and fish pineals play a key role in adapting behaviour to the ambient light conditions through the release of melatonin. In mice, light inhibits nocturnal locomotor activity via the non‐visual photoreceptor Melanopsin. In contrast to the extensively studied function of Melanopsin in the indirect regulation of the rodent pineal, its role in the intrinsically photosensitive zebrafish pineal has not been elucidated. Therefore, it is not evident if the light signalling mechanism is conserved between distant vertebrates, and how Melanopsin could affect diurnal behaviour. A double knockout of melanopsins (opn4.1‐opn4xb) was generated in the diurnal zebrafish, which manifests attenuated locomotor activity during the wake state. Transcriptome sequencing gave insight into pathways downstream of Melanopsin, implying that sustained repression of the melatonin pathway is required to elevate locomotor activity during the diurnal wake state. Moreover, we show that light induces locomotor activity during the diurnal wake state in an intensity‐dependent manner. These observations suggest a common Melanopsin‐driven mechanism between zebrafish and mammals, while the diurnal and nocturnal chronotypes are inversely regulated downstream of melatonin.
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Affiliation(s)
- Marcus P S Dekens
- Max Perutz Laboratory Centre for Molecular Biology University of Vienna and Medical University of Vienna Vienna Austria
| | - Bruno M Fontinha
- Max Perutz Laboratory Centre for Molecular Biology University of Vienna and Medical University of Vienna Vienna Austria
| | - Miguel Gallach
- Max Perutz Laboratory Centre for Molecular Biology University of Vienna and Medical University of Vienna Vienna Austria
- Max Perutz Laboratory Centre for Integrative Bioinformatics University of Vienna and Medical University of Vienna Vienna Austria
| | - Sandra Pflügler
- Max Perutz Laboratory Centre for Molecular Biology University of Vienna and Medical University of Vienna Vienna Austria
| | - Kristin Tessmar‐Raible
- Max Perutz Laboratory Centre for Molecular Biology University of Vienna and Medical University of Vienna Vienna Austria
- Research Platform “Marine Rhythms of Life” University of Vienna Vienna Austria
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Ma H, Yang MS, Zhang YT, Qiu HT, You XX, Chen SX, Hong WS. Expressions of melanopsins in telencephalon imply their function in synchronizing semilunar spawning rhythm in the mudskipper Boleophthalmus pectinirostris. Gen Comp Endocrinol 2022; 315:113926. [PMID: 34653434 DOI: 10.1016/j.ygcen.2021.113926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Revised: 09/22/2021] [Accepted: 10/09/2021] [Indexed: 11/04/2022]
Abstract
The mudskipper Boleophthalmus pectinirostris inhabits intertidal mudflats, exhibiting semilunar reproductive rhythms. To investigate whether melanopsin is possibly involved in the synchronization of the semilunar spawning rhythm in the female mudskipper, we first cloned all four melanopsin subtypes (opn4m1, opn4m3, opn4x1, opn4x2) in B. pectinirostris. Results from RTq-PCR showed that significantly higher transcription levels of all four melanopsin subtypes were observed in the eyes rather than other tissues. In brain, all four melanopsin subtypes were also detectable in different regions, including the telencephalon, in which the expression of melanopsin has not been reported in other teleosts. The transcription levels of opn4m3 and opn4x1 in the telencephalon exhibited a daily fluctuation pattern. When females entered the spawning season, opn4m1 and opn4x1 transcript levels increased significantly in the telencephalon. During the spawning season, the transcript levels of opn4m3 and opn4x1 in the telencephalon appeared to have a cyclic pattern associated with semilunar periodicity, exhibiting two cycles with a peak around the first or the last lunar quarters. Results from ISH showed that, opn4x1 mRNA was localized in the medial of dorsal telencephalic area, dorsal nucleus of ventral telencephalic area (Vd), ventral nucleus of ventral telencephalic area (Vv), anterior part of parvocellular preoptic nucleus, magnocellular part of the magnocellular preoptic nucleus (PMmc), habenular and ventral zone of hypothalamus. Intriguingly, gnrh3 mRNA was also located in Vd, Vv and PMmc. Taken together, our results suggested that melanopsins, e.g. opn4x1, expressed in the telencephalon might mediate semilunar spawning activity in the female mudskipper.
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Affiliation(s)
- He Ma
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, China
| | - Ming Shu Yang
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, China
| | - Yu Ting Zhang
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, China
| | - Heng Tong Qiu
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, China
| | - Xin Xin You
- Shenzhen Key Laboratory of Marine Genomics, Marine and Fisheries Institute, BGI-Shenzhen, Shenzhen 518083, China
| | - Shi Xi Chen
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, China; State-Province Joint Engineering Laboratory of Marine Bioproducts and Technology, Xiamen University, Xiamen 361102, China.
| | - Wan Shu Hong
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, China; State-Province Joint Engineering Laboratory of Marine Bioproducts and Technology, Xiamen University, Xiamen 361102, China.
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Eilertsen M, Clokie BGJ, Ebbesson LOE, Tanase C, Migaud H, Helvik JV. Neural activation in photosensitive brain regions of Atlantic salmon (Salmo salar) after light stimulation. PLoS One 2021; 16:e0258007. [PMID: 34587204 PMCID: PMC8480854 DOI: 10.1371/journal.pone.0258007] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Accepted: 09/16/2021] [Indexed: 11/24/2022] Open
Abstract
Photoreceptive inputs to the teleost brain are perceived as image of the visual world and as photo-modulation of neuroendocrine and neuronal signals. The retina and pineal organ are major receptive organs with projections to various parts of the brain, but in the past decades deep brain photoreceptors have emerged as candidates for photoreceptive inputs, either independent or in combination with projections from light sensory organs. This study aimed to test the effects of narrow bandwidth light using light-emitting diodes technology on brain neural activity through putative opsin stimulation in Atlantic salmon. The expression of c-fos, a known marker of neural activity, was compared in situ between dark-adapted salmon parr and following light stimulation with different wavelengths. c-fos expression increased with duration of light stimulation and the strongest signal was obtained in fish exposed to light for 120 minutes. Distinct and specific brain regions were activated following dark to light stimulation, such as the habenula, suprachiasmatic nucleus, thalamus, and hypothalamus. The c-fos expression was overlapping with photoreceptors expressing melanopsin and/or vertebrate ancient opsin, suggesting a potential direct activation by light. Interestingly in the habenula, a distinct ring of vertebrate ancient opsin and melanopsin expressing cells is overlapping with c-fos expression after neural activation. Salmon exposed to different spectra had neural activation in similar brain regions. The most apparent difference was melanopsin expression in the lateral cells of the lateral tuberal nuclus in the hypothalamus, which appeared to be specifically activated by red light. Light-stimulated neuronal activity in the deep brain was limited to subpopulations of neurons, mainly in regions with neuronal modulation activity, retinal and pineal innervations and known presence of nonvisual photoreceptors. The overlapping expression patterns of c-fos and nonvisual opsins support direct light stimulation of deep brain photoreceptors and the importance of these systems in light induced brain activity.
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Affiliation(s)
- Mariann Eilertsen
- Department of Biological Sciences, University of Bergen, Bergen, Norway
- * E-mail:
| | - Benjamin G. J. Clokie
- Institute of Aquaculture, University of Stirling, Stirling, Scotland, United Kingdom
| | - Lars O. E. Ebbesson
- Department of Biological Sciences, University of Bergen, Bergen, Norway
- Norce, Bergen, Norway
| | | | - Herve Migaud
- Institute of Aquaculture, University of Stirling, Stirling, Scotland, United Kingdom
| | - Jon Vidar Helvik
- Department of Biological Sciences, University of Bergen, Bergen, Norway
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Kitahashi T, Kurokawa D, Ogiso S, Suzuki N, Ando H. Light-induced and circadian expressions of melanopsin genes opn4xa and opn4xb in the eyes of juvenile grass puffer Takifugu alboplumbeus. FISH PHYSIOLOGY AND BIOCHEMISTRY 2021; 47:191-202. [PMID: 33559801 DOI: 10.1007/s10695-020-00901-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2020] [Accepted: 11/16/2020] [Indexed: 06/12/2023]
Abstract
Animals regulate a variety of aspects of physiology according to environmental light conditions via nonvisual opsins such as melanopsin. In order to study photic regulation of fish physiology, expression changes of the genes for melanopsin (opn4xa and opn4xb) and effects of light on them were examined in juvenile grass puffer Takifugu alboplumbeus using quantitative real-time PCR. In the brain of juvenile fish, no significant diurnal nor circadian changes were observed in opn4x mRNA levels. On the other hand, in the eyes, the mRNA level of opn4xa showed a significant diurnal rhythm with a peak at Zeitgeber time (ZT) 4, while no apparent circadian changes were observed. The mRNA level of opn4xb in the eyes showed a diurnal change similar to that of opn4xa, while it showed a significant circadian change. Furthermore, continuous exposure to light during a subjective night significantly increased the mRNA levels of opn4xa in the eyes at ZT24, suggesting that light induces gene expression of opn4xa in the eyes and that the induction occurs only during the night-day transition period. These results suggest that Opn4xa and Opn4xb play differential roles in the eyes of juvenile grass puffer to mediate the physiological effects of environmental light information.
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Affiliation(s)
- Takashi Kitahashi
- Sado Marine Biological Station, Sado Island Center for Ecological Sustainability, Niigata University, 87 Tassha, Sado-shi, Niigata, 952-2135, Japan.
- , Toda-cho 5-33-17, Moriguchi-shi, 570-0014, Osaka, Japan.
| | - Daisuke Kurokawa
- Misaki Marine Biological Station, Graduate School of Science, The University of Tokyo, 1024 Koajiro, Misaki, Miura, Kanagawa, 238-0225, Japan
| | - Shouzo Ogiso
- Noto Marine Laboratory, Institute of Nature and Environmental Technology, Kanazawa University, 4-1 Mu, Ogi, Noto-cho, Ishikawa, 927-0553, Japan
| | - Nobuo Suzuki
- Noto Marine Laboratory, Institute of Nature and Environmental Technology, Kanazawa University, 4-1 Mu, Ogi, Noto-cho, Ishikawa, 927-0553, Japan
| | - Hironori Ando
- Sado Marine Biological Station, Sado Island Center for Ecological Sustainability, Niigata University, 87 Tassha, Sado-shi, Niigata, 952-2135, Japan
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Kryvi H, Nordvik K, Fjelldal PG, Eilertsen M, Helvik JV, Støren EN, Long JH. Heads and tails: The notochord develops differently in the cranium and caudal fin of Atlantic Salmon (Salmo salar, L.). Anat Rec (Hoboken) 2020; 304:1629-1649. [PMID: 33155751 PMCID: PMC8359264 DOI: 10.1002/ar.24562] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 08/27/2020] [Accepted: 09/29/2020] [Indexed: 12/14/2022]
Abstract
While it is well known that the notochord of bony fishes changes over developmental time, less is known about how it varies across different body regions. In the development of the Atlantic salmon, Salmo salar L., cranial and caudal ends of the notochord are overlaid by the formation of the bony elements of the neurocranium and caudal fin, respectively. To investigate, we describe how the notochord of the cranium and caudal fin changes from embryo to spawning adult, using light microscopy, SEM, TEM, dissection, and CT scanning. The differences are dramatic. In contrast to the abdominal and caudal regions, at the ends of the notochord vertebrae never develop. While the cranial notochord builds a tapering, unsegmented cone of chordal bone, the urostylic notochordal sheath never ossifies: adjacent, irregular bony elements form from the endoskeleton of the caudal fin. As development progresses, two previously undescribed processes occur. First, the bony cone of the cranial notochord, and its internal chordocytes, are degraded by chordoclasts, an undescribed function of the clastic cell type. Second, the sheath of the urostylic notochord creates transverse septae that partly traverse the lumen in an irregular pattern. By the adult stage, the cranial notochord is gone. In contrast, the urostylic notochord in adults is robust, reinforced with septae, covered by irregularly shaped pieces of cellular bone, and capped with an opistural cartilage that develops from the sheath of the urostylic notochord. A previously undescribed muscle, with its origin on the opistural cartilage, inserts on the lepidotrich ventral to it.
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Affiliation(s)
- Harald Kryvi
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Kari Nordvik
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | | | - Mariann Eilertsen
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Jon Vidar Helvik
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | | | - John H Long
- Department of Biology, Vassar College, Poughkeepsie, New York, USA
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Prusik M, Lewczuk B. Roles of Direct Photoreception and the Internal Circadian Oscillator in the Regulation of Melatonin Secretion in the Pineal Organ of the Domestic Turkey: A Novel In Vitro Clock and Calendar Model. Int J Mol Sci 2019; 20:ijms20164022. [PMID: 31426535 PMCID: PMC6721154 DOI: 10.3390/ijms20164022] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Revised: 08/10/2019] [Accepted: 08/15/2019] [Indexed: 01/03/2023] Open
Abstract
The regulation of melatonin secretion in the avian pineal organ is highly complex and shows prominent interspecies differences. The aim of this study was to determine the roles of direct photoreception and the internal oscillator in the regulation of melatonin secretion in the pineal organ of the domestic turkey. The pineal organs were collected from 12-, 13- and 14-week-old female turkeys reared under a 12 L:12 D cycle with the photophase from 07.00 to 19.00, and were incubated in superfusion culture for 3-6 days. The cultures were subjected to different light conditions including 12 L:12 D cycles with photophases between 07.00 and 19.00, 13.00 and 01.00 or 01.00 and 13.00, a reversed cycle 12 D:12 L, cycles with long (16 L:8 D) and short (8 L:16 D) photophases, and continuous darkness or illumination. The pineal organs were also exposed to light pulses of variable duration during incubation in darkness or to periods of darkness during the photophase. The secretion of melatonin was determined by direct radioimmunoassay. The turkey pineal organs secreted melatonin in a well-entrained diurnal rhythm with a very high amplitude. Direct photoreception as an independently acting mechanism was able to ensure quick and precise adaptation of the melatonin secretion rhythm to changes in light-dark conditions. The pineal organs secreted melatonin in circadian rhythms during incubation in continuous darkness or illumination. The endogenous oscillator of turkey pinealocytes was able to acquire and store information about the light-dark cycle and then to generate the circadian rhythm of melatonin secretion in continuous darkness according to the stored data. The obtained data suggest that the turkey pineal gland is highly autonomous in the generation and regulation of the melatonin secretion rhythm. They also demonstrate that the turkey pineal organ in superfusion culture is a valuable model for chronobiological studies, providing a highly precise clock and calendar. This system has several features which make it an attractive alternative to other avian pineal glands for circadian studies.
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Affiliation(s)
- Magdalena Prusik
- Department of Histology and Embryology, Faculty of Veterinary Medicine, University of Warmia and Mazury in Olsztyn, Oczapowskiego 13, Olsztyn 10-719, Poland
| | - Bogdan Lewczuk
- Department of Histology and Embryology, Faculty of Veterinary Medicine, University of Warmia and Mazury in Olsztyn, Oczapowskiego 13, Olsztyn 10-719, Poland.
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9
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Eilertsen M, Valen R, Drivenes Ø, Ebbesson LOE, Helvik JV. Transient photoreception in the hindbrain is permissive to the life history transition of hatching in Atlantic halibut. Dev Biol 2018; 444:129-138. [PMID: 30342886 DOI: 10.1016/j.ydbio.2018.10.006] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Revised: 10/13/2018] [Accepted: 10/15/2018] [Indexed: 12/22/2022]
Abstract
In nonmammalian vertebrates, photoreception takes place in the deep brain already early in development, but knowledge is lacking about the functions of these nonvisual photoreceptive systems. Prior to hatching, Atlantic halibut has a transient bilateral cluster of photoreceptive cells in the hindbrain. The cluster is imbedded in a neuronal network projecting to the narrow belt of hatching glands in the yolk sac. In halibut, hatching is inhibited in light and activated by transfer to darkness and c-fos analysis during hatching shows that the hindbrain cluster and hatching glands have neural activation. Unexpectedly, the hindbrain cluster expresses dual photopigments, vertebrate ancient opsin and melanopsin. Evolutionarily, these opsins are believed to belong to different classes of photopigments found in rhabdomeric and ciliary photoreceptors. The concept that an organism develops transient light sensitivity to target critical aspects of life history transitions as hatching provides a fascinating landscape to investigate the timing of other biological events.
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Affiliation(s)
- Mariann Eilertsen
- Department of Biological Sciences, University of Bergen, N- 5020 Bergen, Norway.
| | - Ragnhild Valen
- Department of Molecular Biology, University of Bergen, N- 5020 Bergen, Norway
| | - Øyvind Drivenes
- Department of Molecular Biology, University of Bergen, N- 5020 Bergen, Norway
| | - Lars O E Ebbesson
- Department of Biological Sciences, University of Bergen, N- 5020 Bergen, Norway; Uni Research AS, Thormøhlensgt. 55, N-5008 Bergen, Norway
| | - Jon Vidar Helvik
- Department of Biological Sciences, University of Bergen, N- 5020 Bergen, Norway
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Chen JN, Samadi S, Chen WJ. Rhodopsin gene evolution in early teleost fishes. PLoS One 2018; 13:e0206918. [PMID: 30395593 PMCID: PMC6218077 DOI: 10.1371/journal.pone.0206918] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Accepted: 10/22/2018] [Indexed: 01/03/2023] Open
Abstract
Rhodopsin mediates an essential step in image capture and is tightly associated with visual adaptations of aquatic organisms, especially species that live in dim light environments (e.g., the deep sea). The rh1 gene encoding rhodopsin was formerly considered a single-copy gene in genomes of vertebrates, but increasing exceptional cases have been found in teleost fish species. The main objective of this study was to determine to what extent the visual adaptation of teleosts might have been shaped by the duplication and loss of rh1 genes. For that purpose, homologous rh1/rh1-like sequences in genomes of ray-finned fishes from a wide taxonomic range were explored using a PCR-based method, data mining of public genetic/genomic databases, and subsequent phylogenomic analyses of the retrieved sequences. We show that a second copy of the fish-specific intron-less rh1 is present in the genomes of most anguillids (Elopomorpha), Hiodon alosoides (Osteoglossomorpha), and several clupeocephalan lineages. The phylogenetic analysis and comparisons of alternative scenarios for putative events of gene duplication and loss suggested that fish rh1 was likely duplicated twice during the early evolutionary history of teleosts, with one event coinciding with the hypothesized fish-specific genome duplication and the other in the common ancestor of the Clupeocephala. After these gene duplication events, duplicated genes were maintained in several teleost lineages, whereas some were secondarily lost in specific lineages. Alternative evolutionary schemes of rh1 and comparison with previous studies of gene evolution are also reviewed.
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Affiliation(s)
- Jhen-Nien Chen
- Institute of Oceanography, National Taiwan University, Taipei, Taiwan
| | - Sarah Samadi
- Institute de Systématique, Évolution, Biodiversité (ISYEB), Muséum National d’Histoire Naturelle–CNRS, Sorbonne Université, EPHE, Paris, France
| | - Wei-Jen Chen
- Institute of Oceanography, National Taiwan University, Taipei, Taiwan
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11
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Bertolesi GE, McFarlane S. Seeing the light to change colour: An evolutionary perspective on the role of melanopsin in neuroendocrine circuits regulating light-mediated skin pigmentation. Pigment Cell Melanoma Res 2018; 31:354-373. [PMID: 29239123 DOI: 10.1111/pcmr.12678] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2017] [Accepted: 12/05/2017] [Indexed: 12/17/2022]
Abstract
Melanopsin photopigments, Opn4x and Opn4m, were evolutionary selected to "see the light" in systems that regulate skin colour change. In this review, we analyse the roles of melanopsins, and how critical evolutionary developments, including the requirement for thermoregulation and ultraviolet protection, the emergence of a background adaptation mechanism in land-dwelling amphibian ancestors and the loss of a photosensitive pineal gland in mammals, may have helped sculpt the mechanisms that regulate light-controlled skin pigmentation. These mechanisms include melanopsin in skin pigment cells directly inducing skin darkening for thermoregulation/ultraviolet protection; melanopsin-expressing eye cells controlling neuroendocrine circuits to mediate background adaptation in amphibians in response to surface-reflected light; and pineal gland secretion of melatonin phased to environmental illuminance to regulate circadian and seasonal variation in skin colour, a process initiated by melanopsin-expressing eye cells in mammals, and by as yet unknown non-visual opsins in the pineal gland of non-mammals.
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Affiliation(s)
- Gabriel E Bertolesi
- Hotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Department of Cell Biology and Anatomy, University of Calgary, Calgary, AB, Canada
| | - Sarah McFarlane
- Hotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Department of Cell Biology and Anatomy, University of Calgary, Calgary, AB, Canada
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12
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Barreiro-Iglesias A, Fernández-López B, Sobrido-Cameán D, Anadón R. Organization of alpha-transducin immunoreactive system in the brain and retina of larval and young adult Sea Lamprey (Petromyzon marinus), and their relationship with other neural systems. J Comp Neurol 2017; 525:3683-3704. [DOI: 10.1002/cne.24296] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2016] [Revised: 07/17/2017] [Accepted: 07/19/2017] [Indexed: 11/08/2022]
Affiliation(s)
- Antón Barreiro-Iglesias
- Department of Functional Biology, Faculty of Biology; University of Santiago de Compostela; Santiago de Compostela Spain
| | - Blanca Fernández-López
- Department of Functional Biology, Faculty of Biology; University of Santiago de Compostela; Santiago de Compostela Spain
| | - Daniel Sobrido-Cameán
- Department of Functional Biology, Faculty of Biology; University of Santiago de Compostela; Santiago de Compostela Spain
| | - Ramón Anadón
- Department of Functional Biology, Faculty of Biology; University of Santiago de Compostela; Santiago de Compostela Spain
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13
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Singh KM, Saha S, Gupta BBP. Season-dependent effects of photoperiod and temperature on circadian rhythm of arylalkylamine N -acetyltransferase2 gene expression in pineal organ of an air-breathing catfish, Clarias gariepinus. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2017; 173:140-149. [DOI: 10.1016/j.jphotobiol.2017.05.036] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2017] [Revised: 05/23/2017] [Accepted: 05/25/2017] [Indexed: 11/28/2022]
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14
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Mogi M, Yokoi H, Suzuki T. Analyses of the cellular clock gene expression in peripheral tissue, caudal fin, in the Japanese flounder, Paralichthys olivaceus. Gen Comp Endocrinol 2017; 248:97-105. [PMID: 28249777 DOI: 10.1016/j.ygcen.2017.02.009] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Revised: 01/29/2017] [Accepted: 02/21/2017] [Indexed: 01/03/2023]
Abstract
Understanding the systems for maintaining the circadian rhythms that give organisms the flexibility to adapt to environmental changes is important in both aquaculture and fish chronobiology, because nursery lighting conditions can affect the survival and growth rates of larvae. We previously demonstrated that in flounder, the suprachiasmatic nucleus (SCN) exhibits daily rhythm in per2 expression, in sharp contrast to zebrafish, in which the SCN does not exhibit clear per2 expression rhythm. To examine whether a hierarchy exists in systems that maintain the expression rhythm of peripheral clock genes in flounder, in the present study we analyzed the in vivo and in vitro expression of three clock genes, per2, per1, and cry1, in the caudal fin and the effects of cortisol and melatonin administration on the expression of each clock gene. In vivo, the fin maintained a daily expression rhythm of all three genes, even in 24-h darkness (DD) when shifted from 12-h light:12-h dark (LD) conditions, but fin explants lost the expression rhythm after a short time of tissue culture, even under LD conditions. Cortisol, but not melatonin, significantly upregulated the expression of the three clock genes in fin both in vitro and in vivo. Therefore, we hypothesize that the SCN-pituitary-adrenal cortex pathway plays a role in the oscillation of the peripheral clock in flounder. However, in vivo, peak expression of per2 and cry1 was shifted 2-4h earlier under DD conditions, and their expression was upregulated in response to short exposures to light when larvae were kept under DD conditions. Therefore, we also hypothesize that in addition to the SCN, a light-responsive coordinating factor also functions in photo-entrainment of the peripheral clock in flounder.
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Affiliation(s)
- Makoto Mogi
- Laboratory of Marine Life Science and Genetics, Graduate School of Agricultural Science, Tohoku University, Sendai 980-0845, Japan
| | - Hayato Yokoi
- Laboratory of Marine Life Science and Genetics, Graduate School of Agricultural Science, Tohoku University, Sendai 980-0845, Japan
| | - Tohru Suzuki
- Laboratory of Marine Life Science and Genetics, Graduate School of Agricultural Science, Tohoku University, Sendai 980-0845, Japan.
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15
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Valen R, Eilertsen M, Edvardsen RB, Furmanek T, Rønnestad I, van der Meeren T, Karlsen Ø, Nilsen TO, Helvik JV. The two-step development of a duplex retina involves distinct events of cone and rod neurogenesis and differentiation. Dev Biol 2016; 416:389-401. [PMID: 27374844 DOI: 10.1016/j.ydbio.2016.06.041] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2016] [Revised: 06/23/2016] [Accepted: 06/27/2016] [Indexed: 11/15/2022]
Abstract
Unlike in mammals, persistent postembryonic retinal growth is a characteristic feature of fish, which includes major remodeling events that affect all cell types including photoreceptors. Consequently, visual capabilities change during development, where retinal sensitivity to different wavelengths of light (photopic vision), -and to limited photons (scotopic vision) are central capabilities for survival. Differently from well-established model fish, Atlantic cod has a prolonged larval stage where only cone photoreceptors are present. Rods do not appear until juvenile transition (metamorphosis), a hallmark of indirect developing species. Previously we showed that whole gene families of lws (red-sensitive) and sws1 (UV-sensitive) opsins have been lost in cod, while rh2a (green-sensitive) and sws2 (blue-sensitive) genes have tandem duplicated. Here, we provide a comprehensive characterization of a two-step developing duplex retina in Atlantic cod. The study focuses on cone subtype dynamics and delayed rod neurogenesis and differentiation in all cod life stages. Using transcriptomic and histological approaches we show that different opsins disappear in a topographic manner during development where central to peripheral retina is a key axis of expressional change. Early cone differentiation was initiated in dorso-temporal retina different from previously described in fish. Rods first appeared during initiation of metamorphosis and expression of the nuclear receptor transcription factor nr2e3-1, suggest involvement in rod specification. The indirect developmental strategy thus allows for separate studies of cones and rods development, which in nature correlates with visual changes linked to habitat shifts. The clustering of key retinal genes according to life stage, suggests that Atlantic cod with its sequenced genome may be an important resource for identification of underlying factors required for development and function of photopic and scotopic vision.
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Affiliation(s)
- Ragnhild Valen
- Department of Biology, University of Bergen, NO-5020 Bergen, Norway
| | | | | | - Tomasz Furmanek
- Institute of Marine Research, Nordnes, NO-5005 Bergen, Norway
| | - Ivar Rønnestad
- Department of Biology, University of Bergen, NO-5020 Bergen, Norway
| | - Terje van der Meeren
- Institute of Marine Research, Austevoll Research station and Hjort Centre for Marine Ecosystem Dynamics, NO-5392 Storebø, Norway
| | - Ørjan Karlsen
- Institute of Marine Research, Austevoll Research station and Hjort Centre for Marine Ecosystem Dynamics, NO-5392 Storebø, Norway
| | | | - Jon Vidar Helvik
- Department of Biology, University of Bergen, NO-5020 Bergen, Norway
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16
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Kingston ACN, Cronin TW. Diverse Distributions of Extraocular Opsins in Crustaceans, Cephalopods, and Fish. Integr Comp Biol 2016; 56:820-833. [PMID: 27252200 DOI: 10.1093/icb/icw022] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
Non-visual and extraocular photoreceptors are common among animals, but current understanding linking molecular pathways to physiological function of these receptors is lacking. Opsin diversity in extraocular tissues suggests that many putative extraocular photoreceptors utilize the "visual" phototransduction pathway-the same phototransduction pathway as photoreceptors within the retina dedicated to light detection for image sensing. Here, we provide a brief overview of the current understanding of non-visual and extraocular photoreceptors, and contribute a synopsis of several novel putative extraocular photoreceptors that use both visual and non-visual phototransduction pathways. Crayfish, cephalopods, and flat fish express opsins in diverse tissues, suggesting the presence of extraocular photoreceptors. In most cases, we find that these animals use the same phototransduction pathway that is utilized in the retinas for image-formation. However, we also find the presence of non-visual phototransduction components in the skin of flounders. Our evidence suggests that extraocular photoreceptors may employ a number of phototransduction pathways that do not appear to correlate with purpose or location of the photoreceptor.
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Affiliation(s)
- Alexandra C N Kingston
- Department of Biological Sciences, University of Maryland Baltimore County 1000 Hilltop Circle, Baltimore, MD 21250, USA
| | - Thomas W Cronin
- Department of Biological Sciences, University of Maryland Baltimore County 1000 Hilltop Circle, Baltimore, MD 21250, USA
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