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Macharia J, Jafari T, Song K, Sahoo S, Moharreri E, Meguerdichian A, Amin AS, Manthina V, Khakpash N, Miao R, Suib SL. Arsenate Anion-π Interactions on Amine-Modified Polydivinylbenzene in Aqueous Systems: Experimental and Theoretical Investigation. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:1150-1163. [PMID: 38165764 DOI: 10.1021/acs.langmuir.3c01740] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2024]
Abstract
Anion-π interactions aiding in the adsorption of anions in the solution phase, though challenging to quantify, have attracted a lot of attention in supramolecular chemistry. We present the design of a polymer adsorbent that quantifies the adsorption of arsenate ions experimentally by optimizing anion-π interactions in a purely aqueous system and use density functional theory to compare these results with theoretical data. Arsenate anions are removed from water by amine-functionalized polydivinylbenzene using the comonomer 1-vinyl-1,2,4-triazole, which was cross-linked with divinylbenzene via radical polymerization in a hydrothermal procedure. The amine-functionalized polydivinylbenzene successfully removed arsenate anions from water with a capacity of 46 mg g-1, a 70% increase compared to the nonfunctionalized polydivinylbenzene (27 mg g-1) capacity under the same conditions. Adsorption is best described by the Sips isotherm model with a correlation coefficient R2 factor of 0.99, indicating that adsorption sites are homogeneous, and adsorption occurred by forming a monolayer. Kinetic studies indicated that adsorption is second order in the amine-functionalized polydivinylbenzene. Computational studies using density functional theory showed that the 1-vinyl-1,2,4-triazole comonomer improved the thermodynamic stability of the anionic-π interactions of polydivinylbenzene with arsenate anions. Electrostatic interactions dominate the mechanism of adsorption in polydivinylbenzene compared to the anion-induced interactions that dominate adsorption in amine-functionalized polydivinylbenzene.
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Affiliation(s)
- John Macharia
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road, Storrs, Connecticut 06269-3060, United States
| | - Tahereh Jafari
- Institute of Materials Science, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-3136, United States
| | - Kevin Song
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road, Storrs, Connecticut 06269-3060, United States
| | - Sanjubala Sahoo
- Institute of Materials Science, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-3136, United States
| | - Ehsan Moharreri
- Institute of Materials Science, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-3136, United States
| | - Andrew Meguerdichian
- Institute of Materials Science, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-3136, United States
| | - Alireza S Amin
- Institute of Materials Science, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-3136, United States
| | - Venkata Manthina
- Fraunhofer Center for Energy Innovation (CEI), 270 middle-turnpike, unit 5202, Storrs, Connecticut 06279, United States
| | - Nasser Khakpash
- Department of Materials Science and Engineering, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-5233, United States
| | - Ran Miao
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road, Storrs, Connecticut 06269-3060, United States
| | - Steven L Suib
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road, Storrs, Connecticut 06269-3060, United States
- Institute of Materials Science, University of Connecticut, 97 North Eagleville Road, Storrs, Connecticut 06269-3136, United States
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Nair RR, Seo EW, Hong S, Jung KO, Kim D. Pentafluorobenzene: Promising Applications in Diagnostics and Therapeutics. ACS APPLIED BIO MATERIALS 2023; 6:4081-4099. [PMID: 37721519 DOI: 10.1021/acsabm.3c00676] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2023]
Abstract
Pentafluorobenzene (PFB) represents a class of aromatic fluorine compounds employed exclusively across a spectrum of chemical and biological applications. PFBs are credited with developing various chemical synthesis techniques, networks and biopolymers, bioactive materials, and targeted drug delivery systems. The first part of this review delves into recent developments in PFB-derived molecules for diagnostic purposes. In the latter segment, PFB's role in the domain of theragnostic applications is discussed. The review elucidates different mechanisms and interaction strategies applied in leveraging PFBs to formulate diagnostic and theragnostic tools, substantiated by proper examples. The utilization of PFBs emerges as an enabler, facilitating manifold reactions, improving materials' properties, and even opening avenues for explorative research.
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Affiliation(s)
- Ratish R Nair
- Medical Research Center for Bioreaction to Reactive Oxygen Species and Biomedical Science Institute, Core Research Institute (CRI), Kyung Hee University, Seoul 02447, Republic of Korea
| | - Eun Woo Seo
- Department of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Republic of Korea
| | - Seongje Hong
- Department of Anatomy, College of Medicine, Chung-Ang University, Seoul 06974, Republic of Korea
| | - Kyung Oh Jung
- Department of Anatomy, College of Medicine, Chung-Ang University, Seoul 06974, Republic of Korea
| | - Dokyoung Kim
- Medical Research Center for Bioreaction to Reactive Oxygen Species and Biomedical Science Institute, Core Research Institute (CRI), Kyung Hee University, Seoul 02447, Republic of Korea
- Department of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Republic of Korea
- Department of Anatomy and Neurobiology, College of Medicine, Kyung Hee University, Seoul 02447, Republic of Korea
- Center for Converging Humanities, Kyung Hee University, Seoul 02447, Republic of Korea
- KHU-KIST Department of Converging Science and Technology, Kyung Hee University, Seoul 02447, Republic of Korea
- UC San Diego Materials Research Science and Engineering Center, 9500 Gilman Drive, La Jolla, California 92093, United States
- Center for Brain Technology, Brain Science Institute, Korea Institute of Science and Technology, Seoul 02792, Republic of Korea
- Department of Precision Medicine, Graduate School, Kyung Hee University, Seoul 02447, Republic of Korea
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3
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Fan D, Du J, Dang J, Wang C, Mo Y. The strength and selectivity of perfluorinated nano-hoops and buckybowls for anion binding and the nature of anion-π interactions. J Comput Chem 2023; 44:138-148. [PMID: 35147229 DOI: 10.1002/jcc.26820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 01/17/2022] [Accepted: 01/21/2022] [Indexed: 12/31/2022]
Abstract
Perfluorinated cycloparaphenylenes (F-[n]CPP, n = 5-8), boron nitride nanohoop (F-[5]BNNH), and buckybowls (F-BBs) were proposed as anion receptors via anion-π interactions with halide anions (Cl- , Br- and I- ), and remarkable binding strengths up to -294.8 kJ/mol were computationally verified. The energy decomposition approach based on the block-localized wavefunction method, which combines the computational efficiency of molecular orbital theory and the chemical intuition of ab initio valence bond theory, was applied to the above anion-π complexes, in order to elucidate the nature and selectivity of these interactions. The overall attraction is mainly governed by the frozen energy component, in which the electrostatic interaction is included. Remarkable binding strengths with F-[n]CPPs can be attributed to the accumulated anion-π interactions between the anion and each conjugated ring on the hoop, while for F-BBs, additional stability results from the curved frameworks, which distribute electron densities unequally on π-faces. Interestingly, the strongest host was proved to be the F-[5]BNNH, which exhibits the most significant anisotropy of the electrostatic potential surface due to the difference in the electronegativities of nitrogen and boron. The selectivity of each host for anions was explored and the importance of the often-overlooked Pauli exchange repulsion was illustrated. Chloride anion turns out to be the most favorable anion for all receptors, due to the smallest ionic radius and the weakest destabilizing Pauli exchange repulsion.
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Affiliation(s)
- Dan Fan
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, China
| | - Juan Du
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, China
| | - Jingshuang Dang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, China
| | - Changwei Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, China
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience and Nanoengineering, University of North Carolina at Greensboro, Greensboro, North Carolina, USA
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Cea-Olivares R, Ruiz-Hernández A, Said Razo-Hernández R, Tlahuext H, López-Cardoso M, Román-Bravo P, Vargas-Pineda G, Jancik V, Barroso-Flores J, Pineda-Urbina K, Pablo Mojica-Sánchez J. The importance of intramolecular hydrogen bonds for structural stabilization. [Triphenyl-tetrazolium] [tetraphenyldichalcogenoimidodiphosphinates], [Ph3CN4][Ph2P(X)NP(Y)Ph2]. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.116027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Abstract
It follows from the Schrödinger equation that the forces operating within molecules and molecular complexes are Coulombic, which necessarily entails both electrostatics and polarization. A common and important class of molecular complexes is due to π-holes. These are molecular regions of low electronic density that are perpendicular to planar portions of the molecular frameworks. π-Holes often have positive electrostatic potentials associated with them, which result in mutually polarizing attractive forces with negative sites such as lone pairs, π electrons or anions. In many molecules, π-holes correspond to a flattening of the electronic density surface but in benzene derivatives and in polyazines the π-holes are craters above and below the rings. The interaction energies of π-hole complexes can be expressed quite well in terms of regression relationships that account for both the electrostatics and the polarization. There is a marked gradation in the interaction energies, from quite weak (about -2 kcal mol-1) to relatively strong (about -40 kcal mol-1). Gradations are also evident in the ratios of the intermolecular separations to the sums of the respective van der Waals radii and in the gradual transition of the π-hole atoms from trigonal to quasi-tetrahedral configurations. These trends are consistent with the concept that chemical interactions form a continuum, from very weak to very strong.
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Affiliation(s)
- Peter Politzer
- Department of Chemistry, University of New Orleans, New Orleans, LA 70148, USA.
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Dub PA, Tkachenko NV, Vyas VK, Wills M, Smith JS, Tretiak S. Enantioselectivity in the Noyori–Ikariya Asymmetric Transfer Hydrogenation of Ketones. Organometallics 2021. [DOI: 10.1021/acs.organomet.1c00201] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Pavel A. Dub
- Chemistry Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Nikolay V. Tkachenko
- Chemistry Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah 84322, United States
| | - Vijyesh K. Vyas
- Department of Chemistry, The University of Warwick, Coventry CV4 7AL, United Kingdom
| | - Martin Wills
- Department of Chemistry, The University of Warwick, Coventry CV4 7AL, United Kingdom
| | - Justin S. Smith
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Sergei Tretiak
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
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Morales-Toyo M, Kansız S, Dege N, Glidewell C, Fuenmayor-Zafra A, Cubillán N. Polymorphs of 2-[2-[(2,6-dichlorophenyl)amino]phenyl]acetic acid (Diclofenac): Differences from crystallography, Hirshfeld surface, QTAIM and NCIPlots. Chem Phys 2021. [DOI: 10.1016/j.chemphys.2021.111119] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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8
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Savastano M. Words in supramolecular chemistry: the ineffable advances of polyiodide chemistry. Dalton Trans 2021; 50:1142-1165. [PMID: 33496303 DOI: 10.1039/d0dt04091f] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Polyiodide chemistry has a rich history deeply intertwined with the development of supramolecular chemistry. Technological and theoretical interest in polyiodides has not diminished in the last decade, quite the contrary; yet the advances this perspective intends to cover are muddled by the involution of supramolecular vocabulary, preventing their unbiased discussion. Herein we discuss the pressing necessity of ordering the current babel of novel - and less so - supramolecular terms. Shared decisions at the community level might be required to shape the field into a harmonious body of knowledge, dominated by concepts rather than words. Secondary, σ-hole and halogen bonding schools of thought are all addressed here, together with their respective impact on the field. Then, on the basis of a shared vocabulary, a discussion of polyiodide chemistry is presented, starting with a revisited view of triiodide. The contemporary fields of supramolecular caging and polyiodide networks are then discussed, with emphasis on how the terms we choose to use deeply affect scientific progress.
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Affiliation(s)
- Matteo Savastano
- Department of Chemistry "Ugo Schiff", University of Florence, via della Lastruccia 3, 50019, Sesto Fiorentino, Italy.
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Mavragani N, Kitos AA, Brusso JL, Murugesu M. Enhancing Magnetic Communication between Metal Centres: The Role of s-Tetrazine Based Radicals as Ligands. Chemistry 2021; 27:5091-5106. [PMID: 33079452 DOI: 10.1002/chem.202004215] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 10/19/2020] [Indexed: 12/31/2022]
Abstract
Although 1,2,4,5-tetrazines or s-tetrazines have been known in the literature for more than a century, their coordination chemistry has become increasingly popular in recent years due to their unique redox activity, multiple binding sites and their various applications. The electron-poor character of the ring and stabilization of the radical anion through all four nitrogen atoms in their metal complexes provide new aspects in molecular magnetism towards the synthesis of new high performing Single Molecule Magnets (SMMs). The scope of this review is to examine the role of s-tetrazine radical ligands in transition metal and lanthanide based SMMs and provide a critical overview of the progress thus far in this field. As well, general synthetic routes and new insights for the preparation of s-tetrazines are discussed, along with their redox activity and applications in various fields. Concluding remarks along with the limitations and perspectives of these ligands are discussed.
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Affiliation(s)
- Niki Mavragani
- Department of Chemistry and Biomolecular Sciences, University of Ottawa, 10 Marie Curie, Ottawa, Ontario, K1N 6N5, Canada
| | - Alexandros A Kitos
- Department of Chemistry and Biomolecular Sciences, University of Ottawa, 10 Marie Curie, Ottawa, Ontario, K1N 6N5, Canada
| | - Jaclyn L Brusso
- Department of Chemistry and Biomolecular Sciences, University of Ottawa, 10 Marie Curie, Ottawa, Ontario, K1N 6N5, Canada
| | - Muralee Murugesu
- Department of Chemistry and Biomolecular Sciences, University of Ottawa, 10 Marie Curie, Ottawa, Ontario, K1N 6N5, Canada
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10
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Du J, Wang C, Yin S, Wang W, Mo Y. Resonance-assisted/impaired anion-π interaction: towards the design of novel anion receptors. RSC Adv 2020; 10:36181-36191. [PMID: 35517107 PMCID: PMC9056982 DOI: 10.1039/d0ra07877h] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Accepted: 09/23/2020] [Indexed: 01/23/2023] Open
Abstract
Substituents alter the electron density distribution in benzene in various ways, depending on their electron withdrawing and donating capabilities, as summarized by the empirical Hammett equation. The change of the π electron density distribution subsequently impacts the interaction of substituted benzenes or other cyclic conjugated rings with anions. Currently the design and synthesis of conjugated cyclic receptors capable of binding anions is an active field due to their applications in the sensing and removal of environmental contaminants and molecular recognition. By using the block-localized wavefunction (BLW) method, which is a variant of ab initio valence bond (VB) theory and can derive the reference resonance-free state self-consistently, we quantified the resonance-assisted (RA) or resonance-impaired (RI) phenomena in anion–π interactions from both structural and energetic perspectives. The frozen interaction, in which the electrostatic attraction is involved, has been shown to be the governing factor for the RA or RI interactions with anions. Energy analyses based on the empirical point charge (EPC) model indicated that the anion–π interactions can be simplified as the attraction between a negative point charge (anion) and a group of local dipoles, affected by the enriched or diminished π-cloud due to the resonance between the substituents and the conjugated ring. Hence, two strategies for the design of novel anion receptors can be envisioned. One is the enhancement of the magnitudes and/or numbers of local dipoles (polarized σ bonds), and the other is the reduction of π electron density in conjugated rings. For cases with the RI characteristics, “curved” aromatic molecules are preferred to be anion receptors. Indeed, extremely strong binding was found in complexes formed with fluorinated corannulene (F-CDD) and fluorinated [5]cycloparaphenylene (F-[5]CPP). Inspired by the RA phenomenon, complexes of p-, o- and m-benzoquinones with halides were revisited. Substituents alter the electron density distribution in benzene in various ways, depending on their electron withdrawing and donating capabilities, as summarized by the empirical Hammett equation.![]()
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Affiliation(s)
- Juan Du
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University Xi'an 710119 China
| | - Changwei Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University Xi'an 710119 China
| | - Shiwei Yin
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University Xi'an 710119 China
| | - Wenliang Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University Xi'an 710119 China
| | - Yirong Mo
- Department of Nanoscience Joint School of Nanoscience & Nanoengineering, University of North Carolina at Greensboro Greensboro NC 27401 USA
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Østrøm I, Ortolan AO, Caramori GF, Mascal M, Muñoz‐Castro A, Parreira RLT. In Silico
Design of Cylindrophanes: The Role of Functional Groups in a Fluoride Selective Host. Chemphyschem 2020; 21:1989-2005. [DOI: 10.1002/cphc.202000321] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Revised: 06/23/2020] [Indexed: 12/12/2022]
Affiliation(s)
- Ina Østrøm
- Departamento de Química Universidade Federal de Santa Catarina Campus Universitário Trindade, CP 476 Florianópolis SC, 88040-900 Brazil
| | - Alexandre O. Ortolan
- Departamento de Química Universidade Federal de Santa Catarina Campus Universitário Trindade, CP 476 Florianópolis SC, 88040-900 Brazil
| | - Giovanni F. Caramori
- Departamento de Química Universidade Federal de Santa Catarina Campus Universitário Trindade, CP 476 Florianópolis SC, 88040-900 Brazil
| | - Mark Mascal
- Department of Chemistry University of California Davis 1 Shields Avenue Davis CA 95616 USA
| | - Alvaro Muñoz‐Castro
- Laboratorio de Química Inorgánica y Materiales Moleculares, Facultad de Ingeniería Universidad Autonoma de Chile Llano Subercaseaux 2801 San Miguel, Santiago Chile
| | - Renato L. T. Parreira
- Núcleo de Pesquisas em Ciências Exatas e Tecnológicas Universidade de Franca 14404-600 Franca, SP Brazil
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12
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Rather IA, Wagay SA, Ali R. Emergence of anion-π interactions: The land of opportunity in supramolecular chemistry and beyond. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2020.213327] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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13
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Saeed A, Khurshid A, Flörke U, Echeverría GA, Piro OE, Gil DM, Rocha M, Frontera A, El-Seedi HR, Mumtaz A, Erben MF. Intermolecular interactions in antipyrine-like derivatives 2-halo- N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1 H-pyrazol-4-yl)benzamides: X-ray structure, Hirshfeld surface analysis and DFT calculations. NEW J CHEM 2020. [DOI: 10.1039/d0nj03958f] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Based on experimental and computational data, a complex network of intermolecular interactions has been rationalized for antipyrine compounds.
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14
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Naeem Ahmed M, Yasin KA, Aziz S, Khan SU, Tahir MN, Gil DM, Frontera A. Relevant π-hole tetrel bonding interactions in ethyl 2-triazolyl-2-oxoacetate derivatives: Hirshfeld surface analysis and DFT calculations. CrystEngComm 2020. [DOI: 10.1039/d0ce00335b] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
We report the synthesis and X-ray characterization of four triazole derivatives that include an α-ketoester functionality and two phenyl substituents. The compounds form self-assembled dimers in the solid state establishing two symmetrically equivalent O⋯π-hole interactions.
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Affiliation(s)
- Muhammad Naeem Ahmed
- Department of Chemistry
- The University of Azad Jammu and Kashmir
- Muzaffarabad
- 13100 Pakistan
| | - Khawaja Ansar Yasin
- Department of Chemistry
- The University of Azad Jammu and Kashmir
- Muzaffarabad
- 13100 Pakistan
| | - Shahid Aziz
- Department of Chemistry
- Mirpur University of Science and Technology (MUST) Mirpur-10250 (AJK)
- Pakistan
| | - Saba Urooge Khan
- Department of Polymer Engineering and Technology University of The Punjab Lahore
- Pakistan
| | | | - Diego Mauricio Gil
- INBIOFAL (CONICET – UNT)
- Instituto de Química Orgánica – Cátedra de Química Orgánica I
- Facultad de Bioquímica
- Química y Farmacia
- Universidad Nacional de Tucumán
| | - Antonio Frontera
- Department de Quimica
- Universitat de les Illes Balears
- 07122 Palma de Mallorca Baleares
- Spain
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15
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Savastano M, García-Gallarín C, López de la Torre MD, Bazzicalupi C, Bianchi A, Melguizo M. Anion-π and lone pair-π interactions with s-tetrazine-based ligands. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2019.06.016] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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16
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Molecular structure, QTAIM and bonding character of cation–π interactions of mono- and divalent metal cations (Li+, Na+, K+, Be2+, Mg2+ and Ca2+) with drug of acetaminophen. Theor Chem Acc 2019. [DOI: 10.1007/s00214-019-2492-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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17
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Shinada NK, de Brevern AG, Schmidtke P. Halogens in Protein-Ligand Binding Mechanism: A Structural Perspective. J Med Chem 2019; 62:9341-9356. [PMID: 31117513 DOI: 10.1021/acs.jmedchem.8b01453] [Citation(s) in RCA: 98] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Halogen atoms have been at the center of many rational medicinal chemistry applications in drug design. While fluorine and chlorine atoms are often added to enhance physicochemical properties, bromine and iodine elements are generally inserted to improve selectivity. Favorable halogen interactions such as halogen bond have been thoroughly studied through quantum mechanics and statistical analyses. Although most of the studies focus on halogen interaction through its σ-hole, hydrogen bonding also has a significant impact. Here, we present an analysis describing the interacting environment of halogen atoms in protein-ligand context. With consideration of structural redundancy in the PDB, tendencies toward specific molecular interactions consideration have been refined and implications for rational drug design with halogens further discussed. Finally, we highlight the moderate occurrence of halogen bonding and present the other roles of halogen in protein-ligand complexes, completing the medicinal chemistry guide to rational halogen interactions.
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Affiliation(s)
- Nicolas K Shinada
- Discngine S.A.S. , 79 Avenue Ledru Rollin , 75012 Paris , France.,Biologie Intégrée du Globule Rouge UMR S1134, Inserm, Université Paris Diderot, Sorbonne Paris Cité, Université de la Réunion, Université des Antilles , 75739 Paris , France.,Laboratoire d'Excellence GR-Ex , 75739 Paris , France.,Institut National de la Transfusion Sanguine (INTS) , 75739 Paris , France
| | - Alexandre G de Brevern
- Biologie Intégrée du Globule Rouge UMR S1134, Inserm, Université Paris Diderot, Sorbonne Paris Cité, Université de la Réunion, Université des Antilles , 75739 Paris , France.,Laboratoire d'Excellence GR-Ex , 75739 Paris , France.,Institut National de la Transfusion Sanguine (INTS) , 75739 Paris , France
| | - Peter Schmidtke
- Discngine S.A.S. , 79 Avenue Ledru Rollin , 75012 Paris , France
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Anstöter CS, Rogers JP, Verlet JRR. Spectroscopic Determination of an Anion−π Bond Strength. J Am Chem Soc 2019; 141:6132-6135. [DOI: 10.1021/jacs.9b01345] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Cate S. Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Joshua P. Rogers
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Jan R. R. Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
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20
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Romero AH. Influence of heteroelement on dipole and quadrupole moments of a series of three-membered rings containing a second, third, fourth, or fifth-row atom: a theoretical investigation. Struct Chem 2019. [DOI: 10.1007/s11224-018-1190-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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21
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Dutta D, Chetry S, Gogoi A, Choudhury B, Guha AK, Bhattacharyya MK. Supramolecular association involving anion–π interactions in Cu(II) coordination solids: Experimental and theoretical studies. Polyhedron 2018. [DOI: 10.1016/j.poly.2018.05.039] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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22
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Kashyap C, Ullah SS, Mazumder LJ, Kanti Guha A. Non-covalent interaction in benzene and substituted benzene: A theoretical study. COMPUT THEOR CHEM 2018. [DOI: 10.1016/j.comptc.2018.03.023] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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23
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Savastano M, Bazzicalupi C, García-Gallarín C, Giorgi C, López de la Torre MD, Pichierri F, Bianchi A, Melguizo M. Halide and hydroxide anion binding in water. Dalton Trans 2018; 47:3329-3338. [PMID: 29423483 DOI: 10.1039/c7dt04430e] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The formation of halide and hydroxide anion complexes with two ligands L1 (3,6-bis(morpholin-4-ylmethyl)-1,2,4,5-tetrazine) and L2 (3,6-bis(morpholin-4-ylethyl)-1,2,4,5-tetrazine) was studied in aqueous solution, by means of potentiometric and ITC procedures. In the solid state, HF2-, Cl- and Br- complexes of H2L22+ were analysed by single crystal XRD measurements. Further information on the latter was obtained with the use of density functional theory (DFT) calculations in combination with the polarizable continuum model (PCM). The presence of two halide or bifluoride HF2- (F-H-F-) anions forming anion-π interactions, respectively above and below the ligand tetrazine ring, is the leitmotiv of the [(H2L2)X2] (X = HF2, Cl, Br, I) complexes in the solid state, while hydrogen bonding between the anions and protonated morpholine ligand groups contributes to strengthen the anion-ligand interaction, in particular in the case of Cl- and Br-. In contrast to the solid state, only the anion : ligand complexes of 1 : 1 stoichiometry were found in solution. The stability of these complexes displays the peculiar trend I- > F- > Br- > Cl- which was rationalized in terms of electrostatic, hydrogen bond, anion-π interactions and solvent effects. DFT calculations performed on [(H2L2)X]+ (X = F, Cl, Br, I) in PCM water suggested that the ligand assumes a U-shaped conformation to form one anion-π and two salt bridge interactions with the included anions and furnished structural information to interpret the solvation effects affecting complex formation. The formation of hydroxide anion complexes with neutral (not protonated) L1 and L2 molecules represents an unprecedented case in water. The stability of the [L(OH)]- (L = L1, L2) complexes is comparable to or higher than the stability of halide complexes with protonated ligand molecules, their formation being promoted by largely favourable enthalpic contributions that prevail over unfavourable entropic changes.
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Affiliation(s)
- M Savastano
- Department of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino, Italy.
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24
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Wang T, Liu J. The Nature of Ion-Pair Recognition by Tetra-phosphonate Calix[4]pyrroles. ADVANCED THEORY AND SIMULATIONS 2018. [DOI: 10.1002/adts.201700010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Teng Wang
- College of Chemistry and Pharmaceutical Engineering; Taishan Medical University; Taian 271016 China
| | - Jingjing Liu
- College of Chemistry and Pharmaceutical Engineering; Taishan Medical University; Taian 271016 China
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25
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26
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Esrafili MD, Asadollahi S, Mousavian P. Exploring hydride-π interactions and their tuning by σ-hole bonds: an ab initio study. Mol Phys 2018. [DOI: 10.1080/00268976.2017.1369186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Mehdi D. Esrafili
- Department of Chemistry, Laboratory of Theoretical Chemistry, University of Maragheh, Maragheh, Iran
| | - Soheila Asadollahi
- Department of Chemistry, Laboratory of Theoretical Chemistry, University of Maragheh, Maragheh, Iran
| | - Parisasadat Mousavian
- Department of Chemistry, Laboratory of Theoretical Chemistry, University of Maragheh, Maragheh, Iran
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27
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Kumar N, Mandal SK. Design and application of a fluorogenic receptor for selective sensing of cations, small neutral molecules, and anions. NEW J CHEM 2018. [DOI: 10.1039/c8nj03998d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
An unprecedented single multi-analyte fluorogenic receptor, a sodium salt of N-(methyl-2-thiophenyl)-tyrosine (NaHTyrthio), is reported for the selective sensing of cations (Cu2+), small neutral molecules (nitrobenzene and aniline) and anions (F−) by variable spectral responses.
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Affiliation(s)
- Navnita Kumar
- Department of Chemical Sciences
- Indian Institute of Science Education and Research Mohali
- Mohali
- India
| | - Sanjay K. Mandal
- Department of Chemical Sciences
- Indian Institute of Science Education and Research Mohali
- Mohali
- India
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28
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Affiliation(s)
- Mehdi D. Esrafili
- Laboratory of Theoretical Chemistry, Department of Chemistry, University of Maragheh, Maragheh, Iran
| | - Parisasadat Mousavian
- Laboratory of Theoretical Chemistry, Department of Chemistry, University of Maragheh, Maragheh, Iran
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29
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Alegre-Requena JV, Marqués-López E, Herrera RP. “Push–Pull π+/π–” (PPππ) Systems in Catalysis. ACS Catal 2017. [DOI: 10.1021/acscatal.7b02446] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Juan V. Alegre-Requena
- Laboratorio de Organocatálisis
Asimétrica, Departamento de Química Orgánica,
Instituto de Síntesis Química y Catálisis Homogénea
(ISQCH) CSIC-Universidad de Zaragoza, C/Pedro Cerbuna 12, 50009 Zaragoza, Spain
| | - Eugenia Marqués-López
- Laboratorio de Organocatálisis
Asimétrica, Departamento de Química Orgánica,
Instituto de Síntesis Química y Catálisis Homogénea
(ISQCH) CSIC-Universidad de Zaragoza, C/Pedro Cerbuna 12, 50009 Zaragoza, Spain
| | - Raquel P. Herrera
- Laboratorio de Organocatálisis
Asimétrica, Departamento de Química Orgánica,
Instituto de Síntesis Química y Catálisis Homogénea
(ISQCH) CSIC-Universidad de Zaragoza, C/Pedro Cerbuna 12, 50009 Zaragoza, Spain
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30
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Xu H, Cheng J, Yang X, Liu Z, Li W, Li Q. Comparison of σ-Hole and π-Hole Tetrel Bonds Formed by Pyrazine and 1,4-Dicyanobenzene: The Interplay between Anion-π and Tetrel Bonds. Chemphyschem 2017; 18:2442-2450. [DOI: 10.1002/cphc.201700660] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Huili Xu
- Laboratory of Theoretical and Computational, Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China
| | - Jianbo Cheng
- Laboratory of Theoretical and Computational, Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China
| | - Xin Yang
- Laboratory of Theoretical and Computational, Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China
| | - Zhenbo Liu
- Laboratory of Theoretical and Computational, Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China
| | - Wenzuo Li
- Laboratory of Theoretical and Computational, Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China
| | - Qingzhong Li
- Laboratory of Theoretical and Computational, Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China
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31
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32
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Leoni L, Puttreddy R, Jurček O, Mele A, Giannicchi I, Mihan FY, Rissanen K, Dalla Cort A. Solution and Solid-State Studies on the Halide Binding Affinity of Perfluorophenyl-Armed Uranyl-Salophen Receptors Enhanced by Anion-π Interactions. Chemistry 2016; 22:18714-18717. [DOI: 10.1002/chem.201604313] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Indexed: 12/13/2022]
Affiliation(s)
- Luca Leoni
- Dipartimento di Chimica and IMC-CNR; Università di Roma La Sapienza; Piazzale Aldo Moro 5 00185 Roma Italy
| | - Rakesh Puttreddy
- University of Jyväskylä; Department of Chemistry, Nanoscience Center; P.O. Box 35 40014 University of Jyväskylä Finland
| | - Ondřej Jurček
- University of Jyväskylä; Department of Chemistry, Nanoscience Center; P.O. Box 35 40014 University of Jyväskylä Finland
| | - Andrea Mele
- Dipartimento di Chimica and IMC-CNR; Università di Roma La Sapienza; Piazzale Aldo Moro 5 00185 Roma Italy
| | - Ilaria Giannicchi
- Dipartimento di Chimica and IMC-CNR; Università di Roma La Sapienza; Piazzale Aldo Moro 5 00185 Roma Italy
| | - Francesco Yafteh Mihan
- Dipartimento di Chimica and IMC-CNR; Università di Roma La Sapienza; Piazzale Aldo Moro 5 00185 Roma Italy
| | - Kari Rissanen
- University of Jyväskylä; Department of Chemistry, Nanoscience Center; P.O. Box 35 40014 University of Jyväskylä Finland
| | - Antonella Dalla Cort
- Dipartimento di Chimica and IMC-CNR; Università di Roma La Sapienza; Piazzale Aldo Moro 5 00185 Roma Italy
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33
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Litvinov IA, Voronina YK, Galyametdinova IV, Shashin MS, Semenov VE, Reznik VS. Molecular and crystal structure of 1-(2-hydroxyethyl)-1,2-dihydro-3,4,6-trimethyl-2-oxopyrimidinium iodide: the N-alkylation product of xymedone. J STRUCT CHEM+ 2016. [DOI: 10.1134/s0022476616030185] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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34
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Albrecht M, Yi H, Köksal O, Raabe G, Pan F, Valkonen A, Rissanen K. CF3: An Electron-Withdrawing Substituent for Aromatic Anion Acceptors? “Side-On” versus “On-Top” Binding of Halides. Chemistry 2016; 22:6956-63. [DOI: 10.1002/chem.201600249] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2016] [Indexed: 11/09/2022]
Affiliation(s)
- Markus Albrecht
- Institut für Organische Chemie; RWTH Aachen; Landoltweg 1 52074 Aachen Germany
| | - Hai Yi
- Institut für Organische Chemie; RWTH Aachen; Landoltweg 1 52074 Aachen Germany
| | - Okan Köksal
- Institut für Organische Chemie; RWTH Aachen; Landoltweg 1 52074 Aachen Germany
| | - Gerhard Raabe
- Institut für Organische Chemie; RWTH Aachen; Landoltweg 1 52074 Aachen Germany
| | - Fangfang Pan
- Department of Chemistry; Nanoscience Center; University of Jyväskylä; Survontie 9 B 40014 Jyväskylä Finland
| | - Arto Valkonen
- Department of Chemistry; Nanoscience Center; University of Jyväskylä; Survontie 9 B 40014 Jyväskylä Finland
| | - Kari Rissanen
- Department of Chemistry; Nanoscience Center; University of Jyväskylä; Survontie 9 B 40014 Jyväskylä Finland
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35
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Abstract
The σ-hole and π-hole are the regions with positive surface electrostatic potential on the molecule entity; the former specifically refers to the positive region of a molecular entity along extension of the Y-Ge/P/Se/X covalent σ-bond (Y = electron-rich group; Ge/P/Se/X = Groups IV-VII), while the latter refers to the positive region in the direction perpendicular to the σ-framework of the molecular entity. The directional noncovalent interactions between the σ-hole or π-hole and the negative or electron-rich sites are named σ-hole bond or π-hole bond, respectively. The contributions from electrostatic, charge transfer, and other terms or Coulombic interaction to the σ-hole bond and π-hole bond were reviewed first followed by a brief discussion on the interplay between the σ-hole bond and the π-hole bond as well as application of the two types of noncovalent interactions in the field of anion recognition. It is expected that this review could stimulate further development of the σ-hole bond and π-hole bond in theoretical exploration and practical application in the future.
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Affiliation(s)
- Hui Wang
- College of Chemistry, Beijing Normal University , Beijing 100875, People's Republic of China
| | - Weizhou Wang
- College of Chemistry and Chemical Engineering, Luoyang Normal University , Luoyang 471022, People's Republic of China
| | - Wei Jun Jin
- College of Chemistry, Beijing Normal University , Beijing 100875, People's Republic of China
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36
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Kozuch S. Should “anion–π interactions” be called “anion–σ interactions”? A revision of the origin of some hole-bonds and their nomenclature. Phys Chem Chem Phys 2016; 18:30366-30369. [DOI: 10.1039/c6cp06416g] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The so-called anion–π interactions are dissected to test if indeed the π system of the aromatic ring is the reason for the bond.
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Affiliation(s)
- S. Kozuch
- Department of Chemistry
- Ben-Gurion University of the Negev
- Beer-Sheva 841051
- Israel
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37
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Liu YZ, Yuan K, Yuan Z, Zhu YC, Lv LL. Fluorine substitution effects of halide anion receptors based on the combination of a distinct hydrogen bond and anion–π noncovalent interactions: a theoretical investigation. RSC Adv 2016. [DOI: 10.1039/c5ra26068j] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
Fluorine-substitution effects on anion–π interaction were deeply explored, and a more feasible and rational geometric criterion for halide-anion–π contact is established via three inequalities.
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Affiliation(s)
- Yan-Zhi Liu
- College of Chemical Engineering and Technology
- Tianshui Normal University
- Tianshui
- China
| | - Kun Yuan
- College of Chemical Engineering and Technology
- Tianshui Normal University
- Tianshui
- China
- Institute for Chemical Physics & Department of Chemistry
| | - Zhao Yuan
- Department of Chemistry and Biochemistry
- Florida State University
- Tallahassee
- USA
| | - Yuan-Cheng Zhu
- College of Chemical Engineering and Technology
- Tianshui Normal University
- Tianshui
- China
| | - Ling-Ling Lv
- College of Chemical Engineering and Technology
- Tianshui Normal University
- Tianshui
- China
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38
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Bauzá A, Mooibroek TJ, Frontera A. Towards design strategies for anion–π interactions in crystal engineering. CrystEngComm 2016. [DOI: 10.1039/c5ce01813g] [Citation(s) in RCA: 83] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
This highlight article summarizes some of the fundamental aspects of the anion–π interaction leading to several design strategies for generating it in solids. In the main body we highlight some relevant examples that illustrate the viability of these strategies and the importance of anion–π interactions in crystal engineering.
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Affiliation(s)
- Antonio Bauzá
- Departament de Quimica
- Universitat de les Illes Balears
- 07122 Palma de Mallorca, Spain
| | | | - Antonio Frontera
- Departament de Quimica
- Universitat de les Illes Balears
- 07122 Palma de Mallorca, Spain
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39
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Giese M, Albrecht M, Rissanen K. Experimental investigation of anion–π interactions – applications and biochemical relevance. Chem Commun (Camb) 2016; 52:1778-95. [DOI: 10.1039/c5cc09072e] [Citation(s) in RCA: 177] [Impact Index Per Article: 22.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Anion–π interactions, intuitively repulsive forces, turned from controversial to a well-established non-covalent interaction over the past quarter of a century.
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Affiliation(s)
- M. Giese
- Institut für Organische Chemie
- Universität Duisburg Essen
- 45141 Essen
- Germany
| | - M. Albrecht
- Institut für Organische Chemie
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - K. Rissanen
- University of Jyvaskyla
- Department of Chemistry
- Nanoscience Center
- P.O. Box. 35
- FI-40014 University of Jyvaskyla
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40
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Affiliation(s)
- Michael Giese
- Institut
für Organische Chemie, Universität Duisburg Essen, Universitätsstraße
7, 45141 Essen, Germany
| | - Markus Albrecht
- Institut
für Organische Chemie, RWTH Aachen University, Landoltweg
1, 52074 Aachen, Germany
| | - Kari Rissanen
- Department
of Chemistry, Nanoscience Center, University of Jyvaskyla, P.O. Box. 35, FI-40014 Jyvaskylan yliopisto, Finland
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41
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The Bright Future of Unconventional σ/π-Hole Interactions. Chemphyschem 2015; 16:2496-517. [DOI: 10.1002/cphc.201500314] [Citation(s) in RCA: 475] [Impact Index Per Article: 52.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2015] [Indexed: 01/25/2023]
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42
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Theoretical study of the influence of cation-π and anion-π interactions on some NMR data of borazine complexes. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.04.017] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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43
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Wheeler SE, Bloom JWG. Anion-π interactions and positive electrostatic potentials of N-heterocycles arise from the positions of the nuclei, not changes in the π-electron distribution. Chem Commun (Camb) 2015; 50:11118-21. [PMID: 25116837 DOI: 10.1039/c4cc05304d] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
We show that the positive electrostatic potentials and molecular quadrupole moments characteristic of π-acidic azines, which underlie the ability of these rings to bind anions above their centres, arise from the position of nuclear charges, not changes in the π-electron density distribution.
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Affiliation(s)
- Steven E Wheeler
- Department of Chemistry, Texas A&M University, College Station, TX, USA.
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44
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Chen Y, Wang F. Theoretical study of interactions between electron-deficient arenes and coinage metal anions. J Mol Model 2015; 21:38. [PMID: 25663520 DOI: 10.1007/s00894-015-2584-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Accepted: 01/19/2015] [Indexed: 11/25/2022]
Abstract
The binding behavior of coinage metal anions with some electron-deficient arenes has been investigated by MP2 calculations, and the character of interactions in these complexes has been examined by NBO analysis. The results indicate that coinage metal anions can interact with electron-deficient arenes to form anion-π, strong σ-type and hydrogen-bonding complexes. The σ-type structure is the global minimum for triazine, trifluorotriazine, hexafluorobenzene and tricyanobenzene, and the hydrogen-bonding structure is the global minimum for trifluorobenzene. There exist some differences in the stability of anion-π complexes for coinage metal anions: the anion-π complexes of Au(-) are minima expect for triazine complex; the anion-π complexes of Ag(-) are minima expect for tricyanobenzene complex; and the anion-π complexes of Cu(-) are not minima expect for trifluorobenzene complex. The binding strength of anion-π and hydrogen-bonding complexes for Au(-) is larger than that for Ag(-) and Cu(-), but the binding strength of σ complex displays a different sequence: Cu(-) > Au(-) > Ag(-). The binding behavior of coinage metal anions is more similar to that of F(-) than that of Cl(-) and Br(-). The relaxed potential energy surface scans for some selected systems have been performed to help understand the interactions between coinage metal anions with electron-deficient arenes.
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Affiliation(s)
- Yishan Chen
- School of Chemistry & Chemical Engineering, Qujing Normal University, Qujing, 655011, Yunnan, China,
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45
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Kumar N, Khullar S, Mandal SK. Solvent effect on neutral chiral supramolecular assemblies and their distinct receptor behaviour towards anions. Dalton Trans 2015; 44:1520-5. [PMID: 25482128 DOI: 10.1039/c4dt02778g] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
We describe the distinct receptor behaviour of a neutral chiral Cu(ii) complex in dimethylsulfoxide or methanol towards anions, such as F(-), Cl(-), Br(-), I(-) or OAc(-), where F(-) and OAc(-) show the most colorimetric change, through various spectroscopic techniques. Further insights into this at the molecular level come from the single crystal X-ray structures of both dimethylsulfoxide and methanol solvates which show a solvent effect on their supramolecular network formation. Both chromogenic and fluorogenic sensing of the anions indicate a 2 : 1 receptor-anion formation via anion-π as well as hydrogen bonding interactions.
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Affiliation(s)
- Navnita Kumar
- Department of Chemical Sciences, Indian Institute of Science Education and Research, Mohali, Sector 81, Manauli PO, S.A.S. Nagar, Mohali, Punjab 140306, India.
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46
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Gadre SR, Kumar A. Understanding Lone Pair-π Interactions from Electrostatic Viewpoint. CHALLENGES AND ADVANCES IN COMPUTATIONAL CHEMISTRY AND PHYSICS 2015. [DOI: 10.1007/978-3-319-14163-3_13] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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47
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Wang H, Li C, Wang W, Jin WJ. Strength order and nature of the π-hole bond of cyanuric chloride and 1,3,5-triazine with halide. Phys Chem Chem Phys 2015. [DOI: 10.1039/c5cp03076e] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The 3ClN/3N⋯X−π-hole bond is electrostatically attractive in nature. In the gas phase, it follows the order 3ClN/3N⋯Cl−> 3ClN/3N⋯Br−> 3ClN/3N⋯I−. However, in solution the order is the reverse due to the solvation effect.
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Affiliation(s)
- Hui Wang
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- P. R. China
| | - Chen Li
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- P. R. China
| | - Weizhou Wang
- College of Chemistry and Chemical Engineering
- Luoyang Normal University
- Luoyang 471022
- P. R. China
| | - Wei Jun Jin
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- P. R. China
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48
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Gao M, Gao G, Li Q, Yang X, Li W, Cheng J. Theoretical study of synergistic effects between anion–π and metal–Lp interactions. RSC Adv 2015. [DOI: 10.1039/c5ra12802a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
Interesting cooperativity effects are observed when the anion–π and coinage-metal–Lp interactions coexist in the same multicomponent.
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Affiliation(s)
- Meng Gao
- The Laboratory of Theoretical and Computational Chemistry
- School of Chemistry and Chemical Engineering
- Yantai University
- Yantai 264005
- People's Republic of China
| | - Guanqing Gao
- The Laboratory of Theoretical and Computational Chemistry
- School of Chemistry and Chemical Engineering
- Yantai University
- Yantai 264005
- People's Republic of China
| | - Qingzhong Li
- The Laboratory of Theoretical and Computational Chemistry
- School of Chemistry and Chemical Engineering
- Yantai University
- Yantai 264005
- People's Republic of China
| | - Xin Yang
- The Laboratory of Theoretical and Computational Chemistry
- School of Chemistry and Chemical Engineering
- Yantai University
- Yantai 264005
- People's Republic of China
| | - Wenzuo Li
- The Laboratory of Theoretical and Computational Chemistry
- School of Chemistry and Chemical Engineering
- Yantai University
- Yantai 264005
- People's Republic of China
| | - Jianbo Cheng
- The Laboratory of Theoretical and Computational Chemistry
- School of Chemistry and Chemical Engineering
- Yantai University
- Yantai 264005
- People's Republic of China
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Matthews RP, Welton T, Hunt PA. Hydrogen bonding and π–π interactions in imidazolium-chloride ionic liquid clusters. Phys Chem Chem Phys 2015; 17:14437-53. [DOI: 10.1039/c5cp00459d] [Citation(s) in RCA: 95] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The importance of 1° and 2° hydrogen-bonding and anion–π+ interactions for ionic liquid structuring.
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Affiliation(s)
| | - Tom Welton
- Department of Chemistry
- Imperial College London
- London
- UK
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Anion-π Interactions in Supramolecular Chemistry and Catalysis. CHALLENGES AND ADVANCES IN COMPUTATIONAL CHEMISTRY AND PHYSICS 2015. [DOI: 10.1007/978-3-319-14163-3_16] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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