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Ullah S, Denis PA, Sato F. Coupled cluster investigation of the interaction of beryllium, magnesium, and calcium with pyridine: Implications for the adsorption on nitrogen-doped graphene. COMPUT THEOR CHEM 2019. [DOI: 10.1016/j.comptc.2019.01.015] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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2
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Reimers JR, Hush NS. The critical role of the transition-state cusp diameter in understanding adiabatic and non-adiabatic electron transfer. RUSS J ELECTROCHEM+ 2017. [DOI: 10.1134/s1023193517090105] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Frey JA, Holzer C, Klopper W, Leutwyler S. Experimental and Theoretical Determination of Dissociation Energies of Dispersion-Dominated Aromatic Molecular Complexes. Chem Rev 2016; 116:5614-41. [DOI: 10.1021/acs.chemrev.5b00652] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jann A. Frey
- Departement
für Chemie und Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Christof Holzer
- Institute of Physical Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 2, D-76131 Karlsruhe, Germany
| | - Wim Klopper
- Institute of Physical Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 2, D-76131 Karlsruhe, Germany
| | - Samuel Leutwyler
- Departement
für Chemie und Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
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Řezáč J, Hobza P. Benchmark Calculations of Interaction Energies in Noncovalent Complexes and Their Applications. Chem Rev 2016; 116:5038-71. [DOI: 10.1021/acs.chemrev.5b00526] [Citation(s) in RCA: 281] [Impact Index Per Article: 35.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jan Řezáč
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 166 10 Prague, Czech Republic
| | - Pavel Hobza
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 166 10 Prague, Czech Republic
- Regional
Centre of Advanced Technologies and Materials, Department of Physical
Chemistry, Palacký University, 771 46 Olomouc, Czech Republic
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Zhang X, Li X, Zeng Y, Zheng S, Meng L. Enhancing σ/π-type copper(i)⋯thiophene interactions by metal doping (metal = Li, Na, K, Ca, Sc). Dalton Trans 2015; 44:1283-91. [DOI: 10.1039/c4dt02286f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Metal atom doping on thiophene can enhance the Cu⋯thiophene interactions. Enhancement factors are determined by electrostatic potentials of the molecular surface and the electronic configuration of the doping metal.
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Affiliation(s)
- Xiayan Zhang
- Institute of Computational Quantum Chemistry
- College of Chemistry and Material Science
- Hebei Normal University
- Shijiazhuang 050024
- P. R. China
| | - Xiaoyan Li
- Institute of Computational Quantum Chemistry
- College of Chemistry and Material Science
- Hebei Normal University
- Shijiazhuang 050024
- P. R. China
| | - Yanli Zeng
- Institute of Computational Quantum Chemistry
- College of Chemistry and Material Science
- Hebei Normal University
- Shijiazhuang 050024
- P. R. China
| | - Shijun Zheng
- Institute of Computational Quantum Chemistry
- College of Chemistry and Material Science
- Hebei Normal University
- Shijiazhuang 050024
- P. R. China
| | - Lingpeng Meng
- Institute of Computational Quantum Chemistry
- College of Chemistry and Material Science
- Hebei Normal University
- Shijiazhuang 050024
- P. R. China
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Reimers JR, McKemmish LK, McKenzie RH, Hush NS. Non-adiabatic effects in thermochemistry, spectroscopy and kinetics: the general importance of all three Born–Oppenheimer breakdown corrections. Phys Chem Chem Phys 2015. [DOI: 10.1039/c5cp02238j] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Analytical and numerical solutions describing Born–Oppenheimer breakdown in a simple, widely applicable, model depict shortcomings in modern computational methods.
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Affiliation(s)
- Jeffrey R. Reimers
- International Centre for Quantum and Molecular Structure
- College of Sciences, Shanghai University
- Shanghai 200444
- China
- School of Mathematical and Physical Sciences
| | - Laura K. McKemmish
- Department of Physics and Astronomy
- University College London
- London
- UK
- School of Chemistry
| | - Ross H. McKenzie
- School of Mathematics and Physics
- The University of Queensland
- Australia
| | - Noel S. Hush
- School of Chemistry
- The University of Sydney
- Sydney
- Australia
- School of Molecular Biosciences
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8
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Řezáč J, Hobza P. Ab Initio Quantum Mechanical Description of Noncovalent Interactions at Its Limits: Approaching the Experimental Dissociation Energy of the HF Dimer. J Chem Theory Comput 2014; 10:3066-73. [PMID: 26588277 DOI: 10.1021/ct500047x] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Hydrogen fluoride dimer is a perfect model system for studying hydrogen bonding. Its size makes it possible to apply the most advanced theoretical methods available, yet it is a full-featured complex of molecules with nontrivial electronic structure and dynamic properties. Moreover, the dissociation energy of the HF dimer has been measured experimentally with an unparalleled accuracy of ±1 cm(-1)(Bohac et al. J. Chem. Phys. 1992, 9, 6681). In this work, we attempt to reproduce it by purely ab initio means, using advanced quantum-mechanical computational methods free of any empiricism. The purpose of this study is to demonstrate the capabilities of today's computational chemistry and to point out its limitations by identifying the contributions that introduce the largest uncertainty into the result. The dissociation energy is calculated using a composite scheme including large basis set CCSD(T) calculations, contributions of higher excitations up to CCSDTQ, relativistic and diagonal Born-Oppenheimer corrections and anharmonic vibrational calculations. The error of the calculated dissociation energy is 0.07 kcal/mol (25 cm(-1), 2.5%) when compared to the experiment. The major part of this error can be attributed to the inaccuracy of the calculations of the zero-point vibrational energy.
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Affiliation(s)
- Jan Řezáč
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic , 166 10 Prague 6, Czech Republic
| | - Pavel Hobza
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic , 166 10 Prague 6, Czech Republic.,Regional Center of Advanced Technologies and Materials, Department of Physical Chemistry, Palacký University , 771 46 Olomouc, Czech Republic
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Denis PA, Iribarne F. Theoretical investigation on the interaction between beryllium, magnesium and calcium with benzene, coronene, cirumcoronene and graphene. Chem Phys 2014. [DOI: 10.1016/j.chemphys.2013.11.013] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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10
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Demovičová L, Hobza P, Řezáč J. Evaluation of composite schemes for CCSDT(Q) calculations of interaction energies of noncovalent complexes. Phys Chem Chem Phys 2014; 16:19115-21. [DOI: 10.1039/c4cp02617a] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Evaluation of composite schemes for CCSDT(Q) calculations of interaction energies of noncovalent complexes.
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Affiliation(s)
- Lucia Demovičová
- Institute of Chemistry
- Center for Glycomics
- Slovak Academy of Sciences
- 845 38 Bratislava, Slovak Republic
| | - Pavel Hobza
- Institute of Organic Chemistry and Biochemistry
- Academy of Sciences of the Czech Republic
- 166 10 Prague 6, Czech Republic
- Regional Center of Advanced Technologies and Materials
- Department of Physical Chemistry
| | - Jan Řezáč
- Institute of Organic Chemistry and Biochemistry
- Academy of Sciences of the Czech Republic
- 166 10 Prague 6, Czech Republic
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Šimová L, Řezáč J, Hobza P. Convergence of the Interaction Energies in Noncovalent Complexes in the Coupled-Cluster Methods Up to Full Configuration Interaction. J Chem Theory Comput 2013; 9:3420-8. [DOI: 10.1021/ct4002762] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Lucia Šimová
- Regional Center of Advanced
Technologies and Materials, Department of Physical Chemistry, Palacký University, 771 46 Olomouc, Czech Republic
| | - Jan Řezáč
- Institute of Organic Chemistry
and Biochemistry, Academy of Sciences of the Czech Republic, 166 10 Prague, Czech Republic
| | - Pavel Hobza
- Regional Center of Advanced
Technologies and Materials, Department of Physical Chemistry, Palacký University, 771 46 Olomouc, Czech Republic
- Institute of Organic Chemistry
and Biochemistry, Academy of Sciences of the Czech Republic, 166 10 Prague, Czech Republic
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Furche F, Ahlrichs R, Hättig C, Klopper W, Sierka M, Weigend F. Turbomole. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2013. [DOI: 10.1002/wcms.1162] [Citation(s) in RCA: 666] [Impact Index Per Article: 60.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Filipp Furche
- University of California, IrvineDepartment of ChemistryIrvineCAUSA
| | - Reinhart Ahlrichs
- Institute of Physical ChemistryKarlsruhe Institute of Technology (KIT)KarlsruheGermany
| | - Christof Hättig
- Lehrstuhl für Theoretische ChemieRuhr‐Universität BochumBochumGermany
| | - Wim Klopper
- Institute of Physical ChemistryKarlsruhe Institute of Technology (KIT)KarlsruheGermany
| | - Marek Sierka
- Otto‐Schott‐Institut für MaterialforschungFriedrich‐Schiller‐Universität JenaJenaGermany
| | - Florian Weigend
- Institute of NanotechnologyKarlsruhe Institute of Technology (KIT)KarlsruheGermany
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13
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Řezáč J, Hobza P. Describing Noncovalent Interactions beyond the Common Approximations: How Accurate Is the “Gold Standard,” CCSD(T) at the Complete Basis Set Limit? J Chem Theory Comput 2013; 9:2151-5. [DOI: 10.1021/ct400057w] [Citation(s) in RCA: 314] [Impact Index Per Article: 28.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jan Řezáč
- Institute
of Organic Chemistry
and Biochemistry, Academy of Sciences of the Czech Republic, 166 10
Prague, Czech Republic
| | - Pavel Hobza
- Institute
of Organic Chemistry
and Biochemistry, Academy of Sciences of the Czech Republic, 166 10
Prague, Czech Republic
- Regional centre of Advanced
Technologies and Materials, Department of Physical Chemistry, Palacky
University, 771 46 Olomouc, Czech Republic
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