Moderate grazing increased alpine meadow soils bacterial abundance and diversity index on the Tibetan Plateau

Grazing exclusion alters denitrification N2O/(N2O + N2) ratio in alpine meadow of Qinghai-Tibet Plateau

Grazing exclusion has been implemented worldwide as a nature-based solution for restoring degraded grassland ecosystems that arise from overgrazing. However, the effect of grazing exclusion on soil nitrogen cycle processes, subsequent greenhouse gas emissions and underlying mechanisms remain unclear. Here, we investigated the effect of four-year grazing exclusion on plant communities, soil properties, and soil nitrogen cycle-related functional gene abundance in an alpine meadow on the Qinghai-Tibet Plateau. Using an automated continuous-flow incubation system, we performed an incubation experiment and measured soil-borne N2O, N2, and CO2 fluxes to three successive "hot moment" events (precipitation, N deposition, and oxic-to-anoxic transition) between grazing-excluded and grazing soil. Higher soil N contents (total nitrogen, NH4+, NO3-) and extracellular enzyme activities (β-1,4-glucosidase, β-1,4-N-acetyl-glucosaminidase, cellobiohydrolase) are observed under grazing exclusion. The aboveground and litter biomass of plant community was significantly increased by grazing exclusion, but grazing exclusion decreased the average number of plant species and microbial diversity. The N2O + N2 fluxes observed under grazing exclusion were higher than those observed under free grazing. The N2 emissions and N2O/(N2O + N2) ratios observed under grazing exclusion were higher than those observed under free grazing in oxic conditions. Instead, higher N2O fluxes and lower denitrification functional gene abundances (nirS, nirK, nosZ, and nirK + nirS) under anoxia were found under grazing exclusion than under free grazing. The N2O site-preference value indicates that under grazing exclusion, bacterial denitrification contributes more to higher N2O production compared with under free grazing (81.6 % vs. 59.9 %). We conclude that grazing exclusion could improve soil fertility and plant biomass, nevertheless it may lower plant and microbial diversity and increase potential N2O emission risk via the alteration of the denitrification end-product ratio. This indicates that not all grassland management options result in a mutually beneficial situation among wider environmental goals such as greenhouse gas mitigation, biodiversity, and social welfare.

Herbivore assemblages affect soil microbial communities by altering root biomass and available nutrients in an alpine meadow

Three different herbivore grazing assemblages, namely, yak grazing (YG), Tibetan sheep grazing (SG) and yak and Tibetan sheep co-grazing (MG), are practiced in alpine meadows on the Qinghai-Tibetan Plateau (QTP), but the effects of the different herbivore assemblages on soil microbes are relatively unknown. The microbial community plays an important role in the functional stability of alpine grassland ecosystems. Therefore, it is important to understand how the microbial community structure of grassland ecosystems changes under different herbivore grazing assemblages to ensure their sustainable development. To fill this gap, a field study was carried out to investigate the effects of YG, SG, and MG on plant communities, soil physico-chemical properties and microbial communities under moderate grazing intensity in alpine meadows. Grazing increased the β-diversity of the bacteria community and decreased the β-diversity of the fungal community. The herbivore assemblage affected the microbial community diversity, but not the plant community diversity. Total phosphorus, soil bulk density, root biomass, and plant α-diversity were correlated with both the bacterial and fungal community composition, available phosphorus and soil moisture were correlated only with the bacterial community composition, while available potassium and above-ground net primary production (ANPP) were correlated only with the fungal community composition. Soil available nitrogen, soil available phosphorus and soil bulk density were highest in SG, while ANPP was highest in MG. It was concluded that MG can improve ANPP and stabilize the soil microbial community, suggesting that MG is an effective method for sustainable use and conservation of alpine meadows on the QTP.

Divergent effects of moderate grazing duration on carbon sequestration between temperate and alpine grasslands in China

Moderate grazing has been widely proven to improve ecosystem functioning and have profound effects on the carbon cycling and storage in grassland ecosystems, which highly depend on grazing duration and grassland type. However, the effects of moderate grazing durations on carbon sequestration with different grassland types over broad geographic scales across China remain underexplored in the context of striving for carbon neutrality. Here, we explored the probably different responses of carbon sequestration to moderate grazing duration for temperate and alpine grasslands based on 129 published literatures regarding the China's grasslands. The results showed the soil organic carbon stocks were significantly increased during short-term (<5 years) grazing duration, while significantly decreased during medium- (5-10 years) and long-term (≥ 10 years) grazing durations in temperate grasslands. However, the soil organic carbon stocks were significantly decreased during short-term grazing duration, while showed no significant changes during medium- and long-term grazing durations in alpine grasslands. The changes in soil organic stock were significantly positively correlated with the changes in belowground biomass, root:shoot, and microbial biomass carbon (P < 0.05). These findings suggest that the temperate grasslands change from carbon sink to carbon source with moderate grazing duration increasing, while the alpine grasslands present an opposite change pattern from carbon source to carbon sink, regulated by grazing-altered carbon input and microbial activities. Our study might have significant implications for future sustainable management practices for carbon sequestration of China's grasslands.

Soil microbial community structures are shaped by agricultural systems revealing little temporal variation

Many studies in soil microbial ecology are undertaken with a single sampling event, with the influence of temporal progression rarely being considered. Under field conditions, soil samples were taken from different agricultural systems; a sown grassland to maize rotation (MC), an intensively managed permanent grassland (INT), as well as extensively managed permanent grasslands with high (EXT_HP), low to sufficient (EXT_LP) and deficient available P (EXT_DP), six times throughout the 2017 growing season. Thus, this study aimed to determine if any differences in soil microbiome structures between both sharply contrasting (MC - INT - EXT), slightly differing (EXT_HP - EXT_DP) and quite similar (EXT_HP - EXT_LP and EXT_LP - EXT_DP) agricultural systems persist through changing growth conditions within the growing season. For both fungal and bacterial community structure, the influence of agricultural system (CV = 0.256, P < 0.001 and CV = 0.145, P < 0.01, respectively) was much greater than that of temporal progression (√CV = 0.065 and 0.042, respectively, both P < 0.001). Importantly, nearly all agricultural systems persistently harbored significantly distinct fungal community structures across each of the six sampling events (all at least P < 0.05). There were not as many pairwise differences in bacterial community structure between the agricultural systems, but some did persist (MC and EXT_HP ∼ EXT_DP, all P < 0.001). Additionally, persistent indicator fungal OTUs (IndVal >0.7, P ≤ 0.05) associated to each agricultural system (except EXT_LP) were found in each of the six sampling events. These results highlight the temporal stability of pairwise differences in soil microbiome structures between established agricultural systems through changing plant growth conditions, even between those with a comparable management regime. This is a highly relevant finding in informing the sampling strategy of studies in soil microbial ecology as well as for designing efficient soil biodiversity monitoring systems.

Variations and Mutual Relations of Vegetation–Soil–Microbes of Alpine Meadow in the Qinghai-Tibet Plateau under Degradation and Cultivation

Artificial cultivation had been applied to recover the meadow suffering from serious degradation in the Qinghai–Tibet Plateau. Studies focusing only on the changes in vegetation, soil and microbes along the meadow degradation were insufficient, and artificial cultivation as an important part of succession was always neglected. Here, the variables of vegetation, soil, and soil bacteria are surveyed in four types of alpine meadow in the protected lands of the Qinghai–Tibet Plateau: intact alpine meadow (IAM), moderate degradation alpine meadow (MDAM), extreme degradation alpine meadow (black soil beach (BSB)), and artificial alpine grassland (AAG). The results indicated that degradation and cultivation significantly changed the characteristics of the vegetation community, physicochemical features of the soil, and soil bacterial community diversity. Soil bacteria took a considerably longer time to adapt to degradation and cultivation than vegetation and soil. Compared to IAM and BSB, ADAM and AAG had more specific bacteria identified by ANOVA and LEfSe analysis, implying an unstable state. Combined with vegetation and soil variables, it was speculated that the unstable AAG was not significantly improved from the degraded meadow, and also lagged significantly compared to IAM. Correlation analysis revealed that aboveground biomass, species richness, vegetation coverage, SOC, C/N, BD, WC, and pH were significantly associated with bacterial diversity under community level. Aboveground biomass was an effective indicator for soil bacterial gene copies. Redundancy analysis demonstrated that the soil bacterial community is mainly regulated by the vegetation coverage, Gleason index, Simpson index, TN, TP, and pH under phylum and genus level. Partial mantel test analysis indicated that the physicochemical features of the soil were the most important factor correlating with the soil bacterial community along the degradation and cultivation, compared to other environmental factors.

The Influence of Climate Warming and Humidity on Plant Diversity and Soil Bacteria and Fungi Diversity in Desert Grassland

Our study, which was conducted in the desert grassland of Ningxia in China (E 107.285, N 37.763), involved an experiment with five levels of annual precipitation 33% (R33), 66% (R66), 100% (CK), 133% (R133), 166% (R166) and two temperature levels (inside Open-Top Chamber (OTC) and outside OTC). Our objective was to determine how plant, soil bacteria, and fungi diversity respond to climate change. Our study suggested that plant α-diversity in CK and TCK were significantly higher than that of other treatments. Increased precipitation promoted root biomass (RB) growth more than aboveground living biomass (ALB). R166 promoted the biomass of Agropyron mongolicum the most. In the fungi communities, temperature and precipitation interaction promoted α-diversity. In the fungi communities, the combination of increased temperature and natural precipitation (TCK) promoted β-diversity the most, whose distance was determined to be 25,124 according to PCA. In the bacteria communities, β-diversity in CK was significantly higher than in other treatments, and the distance was determined to be 3010 according to PCA. Soil bacteria and fungi α- and β-diversity, and ALB promoted plant diversity the most. The interactive effects of temperature and precipitation on C, N, and P contents of plants were larger than their independent effects.

Responses of Root Endophytes to Phosphorus Availability in Peach Rootstocks With Contrasting Phosphorus-Use Efficiencies

Phosphorus (P) is an important macronutrient for all lives, but it is also a finite resource. Therefore, it is important to understand how to increase the P availability and plant uptake. The endophytes can help host plants to improve P uptake and will be apparently affected by plant genotypes. To investigate the mechanism of root endophytes in promoting P uptake of peach rootstocks, we analyzed the variations of the root endophytic fungal and bacterial communities of peach rootstocks with different P efficiencies under high or low level of P addition. Results showed that Proteobacteria was the dominant bacterial phylum in the roots of all rootstocks under the two levels of P addition. At low P level, the abundance of Actinoplanes in phosphorus-inefficiency root system was apparently higher than that at high P level. Actinoplanes produced important secondary metabolites, improving the stress resistance of plants. Under high P condition, the abundance of Ferrovibrio was higher in Qing Zhou Mi Tao than in Du Shi. Fe oxides considerably reduced the availability of applied P, which partially explained why the P utilization in Qing Zhou Mi Tao is inefficient. Further, Ascomycota was the dominant fungal phylum in the roots of all rootstocks under different levels of P addition. The fungi community of roots varied in different rootstocks at each P level, but was similar for the same rootstock at different P levels, which indicated that genotype had a greater effect than P addition on the fungal community of peach rootstocks.