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Cador A, Kahlal S, Richards GJ, Halet JF, Hill JP. Protic Processes in an Extended Pyrazinacene: The Case of Dihydrotetradecaazaheptacene. Molecules 2024; 29:2407. [PMID: 38792268 PMCID: PMC11124472 DOI: 10.3390/molecules29102407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 05/14/2024] [Accepted: 05/16/2024] [Indexed: 05/26/2024] Open
Abstract
Pyrazinacenes are linearly fused heteroaromatic rings, with N atoms replacing all apical CH moieties. Component rings may exist in a reduced state, having NH groups instead of N, causing cross-conjugation. These compounds have interesting optical and electronic properties, including strong fluorescence in the near-infrared region and photocatalytic properties, leading to diverse possible applications in bio-imaging and organic synthesis, as well as obvious molecular electronic uses. In this study, we investigated the behavior of seven-ring pyrazinacene 2,3,11,12-tetraphenyl-7,16-dihydro-1,4,5,6,7,8,9,12,13,14,15,16,17,18-tetradecaazaheptacene (Ph4H2N14HEPT), with an emphasis on protic processes, including oxidation, tautomerism, deprotonation, and protonation, and the species resulting from those processes. We used computational methods to optimize the structures of the different species and generate/compare molecular orbital structures. The aromaticity of the species generated by the different processes was assessed using the nucleus-independent chemical shifts, and trends in the values were associated with the different transformations of the pyrazinacene core. The computational data were compared with experimental data obtained from synthetic samples of the molecule tBu8Ph4H2N14HEPT.
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Affiliation(s)
- Aël Cador
- French Alternative Energies and Atomic Energy Commission, CEA Saclay, DRF/IRAMIS/NIMBE/LSDRM, F-91191 Gif-sur-Yvette, France;
- Ecole Nationale Supérieure de Chimie de Rennes (ENSCR), CNRS, Institut des Sciences Chimiques de Rennes (ISCR), University of Rennes, UMR 6226, 11 Allée de Beaulieu, F-35708 Rennes, France;
| | - Samia Kahlal
- Ecole Nationale Supérieure de Chimie de Rennes (ENSCR), CNRS, Institut des Sciences Chimiques de Rennes (ISCR), University of Rennes, UMR 6226, 11 Allée de Beaulieu, F-35708 Rennes, France;
| | - Gary J. Richards
- Department of Applied Chemistry, Graduate School of Engineering and Science, Shibaura Institute of Technology, Fukasaku 307, Minuma-ku, Saitama-shi 337-8570, Saitama, Japan;
| | - Jean-François Halet
- Ecole Nationale Supérieure de Chimie de Rennes (ENSCR), CNRS, Institut des Sciences Chimiques de Rennes (ISCR), University of Rennes, UMR 6226, 11 Allée de Beaulieu, F-35708 Rennes, France;
- CNRS–Saint-Gobain–NIMS, IRL 3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba 305-0044, Ibaraki, Japan
| | - Jonathan P. Hill
- Research Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba 305-0044, Ibaraki, Japan
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Abstract
Pyrazinacenes are a class of nitrogen-containing heteroacene molecules composed of linearly fused pyrazine units, which might also include dihydropyrazine groups leading to different reduced states of the compounds. While they are structurally similar to hydrocarbon acenes (e.g., pentacene) the presence of increasing numbers of N-heteroatoms introduces several different additional features of the compounds so that they can be considered for investigations beyond those suggested for acenes (i.e., organic field-effect transistors, solar cell components). Pyrazinacenes are in several ways complementary to C-H-only acenes based on the increasing stability of reduced states of the compounds with increasing numbers of fused pyrazine rings, although an acene-like electronic structure persists in the compounds so far studied. However, the introduction of multiple N atoms leads to properties that depart from C-H-only acenes. In particular, the compounds exhibit a delocalization of NH protons in extended reduced compounds and oxidation state switchability in solution and at interfaces. The presence of NH groups also allows an easy introduction of solubilizing groups at the pyrazinacene chromophore. In this Account, we will describe the preparation of extended pyrazinacenes from dipyrazino[2,3-b:2',3'-e]pyrazine (1,4,5,8,9,10-hexaazaanthracene; N6) derivatives up to 1,4,5,6,7,8,9,12,13,14,15,16,17,18-tetradecaazaheptacene (N14) and also assess structures of the relevant compounds based on X-ray crystallographic studies. Emergent properties of the molecules include highly unusual linear tautomeric processes based on a delocalization of protons (and the corresponding formation of orbitals based on multiple adjacent N lone electron pair interactions), which suggest special transport properties based on molecular protonics. Molecules such as decazapentacene (N10) exhibit multistability of oxidation state, and this is predicted to promote the redox catalytic properties of the compounds. The oxidation-state switching of on-surface processes is also described and has been investigated using scanning tunneling microscopy. The longest known pyrazinacene chromophore (N14) exhibits amphiprotism with its state of protonation being strongly coupled to its fluorescence emission properties in the near-infrared region indicating possible uses in pH-coupled bioimaging applications. The synthesis of the pyrazinacenes is flexible and allows the preparation of symmetrically or unsymmetrically substituted derivatives for the development of more complex molecules and for control of the electronic structure of the acene unit. Overall, the pyrazinacenes represent an emerging class of highly nitrogenous heteroacenes with unique properties and excellent potential for development in different applications based on their special supramolecular properties including guest binding or interactions in biological systems.
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Affiliation(s)
- Gary J. Richards
- Department of Applied Chemistry, Graduate School of Engineering and Science, Shibaura Institute of Technology, Fukasaku 307, Minuma-ku, Saitama-shi, Saitama 337-8570, Japan
| | - Jonathan P. Hill
- Functional Chromophores Group, International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
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Miklík D, Fatemeh Mousavi S, Burešová Z, Middleton A, Matsushita Y, Labuta J, Ahsan A, Buimaga-Iarinca L, Karr PA, Bureš F, Richards GJ, Švec P, Mori T, Ariga K, Wakayama Y, Morari C, D’Souza F, Jung TA, Hill JP. Pyrazinacenes exhibit on-surface oxidation-state-dependent conformational and self-assembly behaviours. Commun Chem 2021; 4:29. [PMID: 36697553 PMCID: PMC9814942 DOI: 10.1038/s42004-021-00470-w] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Accepted: 02/09/2021] [Indexed: 01/31/2023] Open
Abstract
Acenes and azaacenes lie at the core of molecular materials' applications due to their important optical and electronic features. A critical aspect is provided by their heteroatom multiplicity, which can strongly affect their properties. Here we report pyrazinacenes containing the dihydro-decaazapentacene and dihydro-octaazatetracene chromophores and compare their properties/functions as a model case at an oxidizing metal substrate. We find a distinguished, oxidation-state-dependent conformational adaptation and self-assembly behaviour and discuss the analogies and differences of planar benzo-substituted decaazapentacene and octaazatetracene forms. Our broad experimental and theoretical study reveals that decaazapentacene is stable against oxidation but unstable against reduction, which is in contrast to pentacene, its C-H only analogue. Decaazapentacenes studied here combine a planar molecular backbone with conformationally flexible substituents. They provide a rich model case to understand the properties of a redox-switchable π-electronic system in solution and at interfaces. Pyrazinacenes represent an unusual class of redox-active chromophores.
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Affiliation(s)
- David Miklík
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan ,grid.11028.3a000000009050662XInstitute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Pardubice, Czech Republic
| | - S. Fatemeh Mousavi
- grid.6612.30000 0004 1937 0642Department of Physics, University of Basel, Basel, Switzerland
| | - Zuzana Burešová
- grid.11028.3a000000009050662XInstitute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Pardubice, Czech Republic
| | - Anna Middleton
- grid.266869.50000 0001 1008 957XDepartment of Chemistry, University of North Texas, Denton, TX USA
| | - Yoshitaka Matsushita
- grid.21941.3f0000 0001 0789 6880Research Network and Facility Services Division, National Institute for Materials Science, Tsukuba, Ibaraki Japan
| | - Jan Labuta
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan
| | - Aisha Ahsan
- grid.6612.30000 0004 1937 0642Department of Physics, University of Basel, Basel, Switzerland
| | - Luiza Buimaga-Iarinca
- grid.435410.70000 0004 0634 1551National Institute for Research and Development of Isotopic and Molecular Technologies (NIRDIMT), Cluj-Napoca, Romania
| | - Paul A. Karr
- grid.439142.90000 0001 0357 7380Department of Physical Sciences and Mathematics, Wayne State College, Wayne, NE USA
| | - Filip Bureš
- grid.11028.3a000000009050662XInstitute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Pardubice, Czech Republic
| | - Gary J. Richards
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan ,grid.419152.a0000 0001 0166 4675Department of Applied Chemistry, Graduate School of Engineering and Science, Shibaura Institute of Technology, Saitama-shi, Saitama Japan
| | - Pavel Švec
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan
| | - Toshiyuki Mori
- grid.21941.3f0000 0001 0789 6880Center for Green Research on Energy and Environmental Materials, National Institute for Materials Science, Tsukuba, Ibaraki Japan
| | - Katsuhiko Ariga
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan ,grid.26999.3d0000 0001 2151 536XGraduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan
| | - Yutaka Wakayama
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan
| | - Cristian Morari
- grid.435410.70000 0004 0634 1551National Institute for Research and Development of Isotopic and Molecular Technologies (NIRDIMT), Cluj-Napoca, Romania
| | - Francis D’Souza
- grid.266869.50000 0001 1008 957XDepartment of Chemistry, University of North Texas, Denton, TX USA
| | - Thomas A. Jung
- grid.5991.40000 0001 1090 7501Laboratory for Micro- and Nanotechnology, Paul Scherrer Institute, Villigen, Switzerland
| | - Jonathan P. Hill
- grid.21941.3f0000 0001 0789 6880International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Tsukuba, Ibaraki Japan
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Richards GJ, Cador A, Yamada S, Middleton A, Webre WA, Labuta J, Karr PA, Ariga K, D’Souza F, Kahlal S, Halet JF, Hill JP. Amphiprotism-Coupled Near-Infrared Emission in Extended Pyrazinacenes Containing Seven Linearly Fused Pyrazine Units. J Am Chem Soc 2019; 141:19570-19574. [DOI: 10.1021/jacs.9b10952] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Gary J. Richards
- Department of Chemistry, Ochanomizu University, Otsuka 2-1-1, Bunkyo-ku, Tokyo 112-8610, Japan
- International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - Aël Cador
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, UMR 6226, 35000 Rennes, France
| | - Shinji Yamada
- Department of Chemistry, Ochanomizu University, Otsuka 2-1-1, Bunkyo-ku, Tokyo 112-8610, Japan
| | - Anna Middleton
- Department of Chemistry, University of North Texas, 1155 Union Circle, 305070, Denton, Texas 76203, United States
| | - Whitney A. Webre
- Department of Chemistry, University of North Texas, 1155 Union Circle, 305070, Denton, Texas 76203, United States
| | - Jan Labuta
- International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - Paul A. Karr
- Department of Physical Sciences and Mathematics, Wayne State College, 111 Main Street, Wayne, Nebraska 68787, United States
| | - Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa 277-0827, Japan
| | - Francis D’Souza
- Department of Chemistry, University of North Texas, 1155 Union Circle, 305070, Denton, Texas 76203, United States
| | - Samia Kahlal
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, UMR 6226, 35000 Rennes, France
| | - Jean-François Halet
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, UMR 6226, 35000 Rennes, France
| | - Jonathan P. Hill
- International Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
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