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Lam NYS, Stockdale TP, Anketell MJ, Paterson I. Conquering peaks and illuminating depths: developing stereocontrolled organic reactions to unlock nature's macrolide treasure trove. Chem Commun (Camb) 2021; 57:3171-3189. [PMID: 33666631 DOI: 10.1039/d1cc00442e] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The structural complexity and biological importance of macrolide natural products has inspired the development of innovative strategies for their chemical synthesis. With their dense stereochemical content, high level of oxygenation and macrocyclic cores, we viewed the efficient total synthesis of these valuable compounds as an aspirational driver towards developing robust methods and strategies for their construction. Starting out from the initial development of our versatile asymmetric aldol methodology, this personal perspective reflects on an adventurous journey, with all its trials, tribulations and serendipitous discoveries, across the total synthesis, in our group, of a representative selection of six macrolide natural products of marine and terrestrial origin - swinholide A, spongistatin 1, spirastrellolide A, leiodermatolide, chivosazole F and actinoallolide A.
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Affiliation(s)
- Nelson Y S Lam
- Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
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2
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Anketell MJ, Sharrock TM, Paterson I. Total synthesis of the actinoallolides and a designed photoaffinity probe for target identification. Org Biomol Chem 2020; 18:8109-8118. [PMID: 33015697 DOI: 10.1039/d0ob01831g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The actinoallolides are a family of polyketide natural products isolated from the bacterium Actinoallomurus fulvus. They show potent biological activity against trypanosomes, the causative agents of the neglected tropical diseases human African trypanosomiasis (sleeping sickness) and Chagas disease, while exhibiting no cytotoxicity against human cell lines. Herein, we give a full account of our strategy evolution towards the synthesis of this structurally unique class of 12-membered macrolides, which culminated in the first total synthesis of (+)-actinoallolide A in 20 steps and 8% overall yield. Subsequent late-stage diversification then provided ready access to the congeneric (+)-actinoallolides B-E. Enabled by this flexible and efficient endgame sequence, we also describe the design and synthesis of a photoaffinity probe based on actinoallolide A to investigate its biological mode of action. This will allow ongoing labelling studies to identify their protein binding target(s).
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Affiliation(s)
- Matthew J Anketell
- University Chemical Laboratory, University of Cambridge, Lensfield Road, CB2 1EW, UK
| | - Theodore M Sharrock
- University Chemical Laboratory, University of Cambridge, Lensfield Road, CB2 1EW, UK
| | - Ian Paterson
- University Chemical Laboratory, University of Cambridge, Lensfield Road, CB2 1EW, UK
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Deraet X, Voets L, Van Lommel R, Verniest G, De Proft F, De Borggraeve W, Alonso M. Stereoselective Reductions of 3-Substituted Cyclobutanones: A Comparison between Experiment and Theory. J Org Chem 2020; 85:7803-7816. [PMID: 32441520 DOI: 10.1021/acs.joc.0c00464] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The stereoselective reduction of carbonyls is of key importance in the total synthesis of natural products and in medicinal chemistry. Nevertheless, models for rationalizing the stereoselectivity of the hydride reductions of cyclobutanones toward cyclobutanols are largely lacking, unlike cyclohexanone reductions. In order to elucidate the factors that control the stereoselectivity of these reductions, we have investigated the effect of the reaction temperature, solvent, substituent, and type of reducing agent using a synergistic experimental-computational approach. On the experimental side, the hydride reduction of 3-substituted cyclobutanones was proven to be highly selective for the formation of cis alcohol (>90%), irrespective of the size of the hydride reagent. The pronounced selectivity can be further enhanced by lowering the reaction temperature or decreasing the solvent polarity. On the computational side, density functional theory and noncovalent interaction analysis reveal that torsional strain plays a major role in the preference for the antifacial hydride approach, consistent with the Felkin-Anh model. In the presence of the benzyloxy substituent, the high selectivity for the cis isomer is also driven by repulsive electrostatic interactions in the case of a syn-facial hydride attack. The computed cis/trans ratios are in good agreement with the experimental ones and thus show the potential of computational chemistry for predicting and rationalizing the stereoselectivity of hydride reductions of cyclobutanones.
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Affiliation(s)
- Xavier Deraet
- Department of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, Elsene, Brussels 1050, Belgium
| | - Lauren Voets
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F Leuven Chem&Tech, Box 2404, Leuven 3001, Belgium
| | - Ruben Van Lommel
- Department of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, Elsene, Brussels 1050, Belgium.,Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F Leuven Chem&Tech, Box 2404, Leuven 3001, Belgium
| | - Guido Verniest
- Research Group of Organic Chemistry (ORGC), Departments of Bio-engineering Sciences and Chemistry, Vrije Universiteit Brussel (VUB), Pleinlaan 2, Elsene, Brussels 1050, Belgium
| | - Frank De Proft
- Department of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, Elsene, Brussels 1050, Belgium
| | - Wim De Borggraeve
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F Leuven Chem&Tech, Box 2404, Leuven 3001, Belgium
| | - Mercedes Alonso
- Department of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, Elsene, Brussels 1050, Belgium
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Anketell MJ, Sharrock TM, Paterson I. A Unified Total Synthesis of the Actinoallolides, a Family of Potent Anti‐Trypanosomal Macrolides. Angew Chem Int Ed Engl 2019; 59:1572-1576. [DOI: 10.1002/anie.201914042] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2019] [Indexed: 12/21/2022]
Affiliation(s)
- Matthew J. Anketell
- University Chemical Laboratory University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Theodore M. Sharrock
- University Chemical Laboratory University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Ian Paterson
- University Chemical Laboratory University of Cambridge Lensfield Road Cambridge CB2 1EW UK
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5
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Anketell MJ, Sharrock TM, Paterson I. A Unified Total Synthesis of the Actinoallolides, a Family of Potent Anti‐Trypanosomal Macrolides. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201914042] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Matthew J. Anketell
- University Chemical Laboratory University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Theodore M. Sharrock
- University Chemical Laboratory University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Ian Paterson
- University Chemical Laboratory University of Cambridge Lensfield Road Cambridge CB2 1EW UK
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Gómez-Palomino A, Pellicena M, Krämer K, Romea P, Urpí F, Aullón G, Padrón JM. Total synthesis of (+)-herboxidiene/GEX 1A. Org Biomol Chem 2017; 15:1842-1862. [DOI: 10.1039/c7ob00072c] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An efficient synthesis of herboxidiene is granted from highly stereoselective aldol reactions from two lactate-derived ketones and an oxa-Michael cyclization.
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Affiliation(s)
- Alejandro Gómez-Palomino
- Departament de Química Inorgànica i Orgànica
- Secció de Química Orgànica
- and Institut de Biomedicina (IBUB)
- Universitat de Barcelona
- 08028 Barcelona
| | - Miquel Pellicena
- Departament de Química Inorgànica i Orgànica
- Secció de Química Orgànica
- and Institut de Biomedicina (IBUB)
- Universitat de Barcelona
- 08028 Barcelona
| | - Katrina Krämer
- Departament de Química Inorgànica i Orgànica
- Secció de Química Orgànica
- and Institut de Biomedicina (IBUB)
- Universitat de Barcelona
- 08028 Barcelona
| | - Pedro Romea
- Departament de Química Inorgànica i Orgànica
- Secció de Química Orgànica
- and Institut de Biomedicina (IBUB)
- Universitat de Barcelona
- 08028 Barcelona
| | - Fèlix Urpí
- Departament de Química Inorgànica i Orgànica
- Secció de Química Orgànica
- and Institut de Biomedicina (IBUB)
- Universitat de Barcelona
- 08028 Barcelona
| | - Gabriel Aullón
- Departament de Química Inorgànica i Orgànica
- Secció de Química Inorgànica
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - José M. Padrón
- BioLab
- Instituto Universitario de Bio-Orgánica “Antonio González” (IUBO-AG)
- Centro de Investigaciones Biomédicas de Canarias (CIBICAN)
- Universidad de La Laguna
- Spain
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Kim D, Lee JS, Lozano L, Kong SB, Han H. Enantioenriched Bifunctional Crotylsilanes for the Asymmetric Synthesis of Orthogonally Protected 2-Methyl-1,3-diols. Org Lett 2013; 15:5142-5. [DOI: 10.1021/ol4026167] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Dongeun Kim
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Jae Seung Lee
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Lucia Lozano
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Suk Bin Kong
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Hyunsoo Han
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
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Pellicena M, Krämer K, Romea P, Urpí F. Total synthesis of (+)-herboxidiene from two chiral lactate-derived ketones. Org Lett 2011; 13:5350-3. [PMID: 21913648 DOI: 10.1021/ol202210k] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A substrate-controlled synthesis of (+)-herboxidiene from two lactate-derived chiral ketones is described. Remarkably, most of the carbon backbone was constructed through highly stereoselective titanium-mediated aldol reactions and an Ireland-Claisen rearrangement. Furthermore, an oxa-Michael cyclization and a high-yield Suzuki coupling were used to assemble the pyran ring and the diene moiety respectively.
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Affiliation(s)
- Miquel Pellicena
- Departament de Química Orgànica, Universitat de Barcelona, Carrer Martí i Franqués 1-11, 08028 Barcelona, Catalonia, Spain
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Esteve J, Jiménez C, Nebot J, Velasco J, Romea P, Urpí F. Highly stereoselective titanium-mediated aldol reactions from chiral α-silyloxy ketones. A reliable tool for the synthesis of natural products. Tetrahedron 2011. [DOI: 10.1016/j.tet.2011.06.019] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Shen H, Yang KF, Shi ZH, Jiang JX, Lai GQ, Xu LW. Recyclable Tertiary Amine Modified Diarylprolinol Ether as Aminocatalyst for the Sequential Asymmetric Synthesis of Functionalized Cyclohexanes and Chromenes. European J Org Chem 2011. [DOI: 10.1002/ejoc.201100613] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Esteve J, Lorente A, Romea P, Urpí F, Ríos-Luci C, Padrón JM. Synthesis and Biological Evaluation of 1-Deoxy-5-hydroxysphingosine Derivatives. European J Org Chem 2010. [DOI: 10.1002/ejoc.201001268] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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