1
|
Arnodo D, De Nardi F, Parisotto S, De Nardo E, Cananà S, Salvatico F, De Marchi E, Scarpi D, Blangetti M, Occhiato EG, Prandi C. Asymmetric Reduction of Cyclic Imines by Imine Reductase Enzymes in Non-Conventional Solvents. CHEMSUSCHEM 2024; 17:e202301243. [PMID: 37751248 DOI: 10.1002/cssc.202301243] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Revised: 09/22/2023] [Accepted: 09/26/2023] [Indexed: 09/27/2023]
Abstract
The first enantioselective reduction of 2-substituted cyclic imines to the corresponding amines (pyrrolidines, piperidines, and azepines) by imine reductases (IREDs) in non-conventional solvents is reported. The best results were obtained in a glycerol/phosphate buffer 1 : 1 mixture, in which heterocyclic amines were produced with full conversions (>99 %), moderate to good yields (22-84 %) and excellent S-enantioselectivities (up to >99 % ee). Remarkably, the process can be performed at a 100 mM substrate loading, which, for the model compound, means a concentration of 14.5 g L-1 . A fed-batch protocol was also developed for a convenient scale-up transformation, and one millimole of substrate 1 a was readily converted into 120 mg of enantiopure amine (S)-2 a with a remarkable 80 % overall yield. This aspect strongly contributes to making the process potentially attractive for large-scale applications in terms of economic and environmental sustainability for a good number of substrates used to produce enantiopure cyclic amines of high pharmaceutical interest.
Collapse
Affiliation(s)
- Davide Arnodo
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| | - Federica De Nardi
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| | - Stefano Parisotto
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| | - Eugenio De Nardo
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| | - Stefania Cananà
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
- Scuola Universitaria Superiore I.U.S.S. Pavia, Piazza Vittoria 15, 2700, Pavia, Italy
| | - Federica Salvatico
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| | - Elisa De Marchi
- Dipartimento di Chimica 'Ugo Schiff', Università degli Studi di Firenze, Via della Lastruccia 13, 50019, Sesto Fiorentino, Italy
| | - Dina Scarpi
- Dipartimento di Chimica 'Ugo Schiff', Università degli Studi di Firenze, Via della Lastruccia 13, 50019, Sesto Fiorentino, Italy
| | - Marco Blangetti
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| | - Ernesto G Occhiato
- Dipartimento di Chimica 'Ugo Schiff', Università degli Studi di Firenze, Via della Lastruccia 13, 50019, Sesto Fiorentino, Italy
| | - Cristina Prandi
- Dipartimento di Chimica, Università degli Studi di Torino, Via Pietro Giuria 7, 10125, Torino, Italy
| |
Collapse
|
2
|
Bucci R, Foschi F, Loro C, Erba E, Gelmi ML, Pellegrino S. Fishing in the Toolbox of Cyclic Turn Mimics: a Literature Overview of the Last Decade. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100244] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Raffaella Bucci
- Dipartimento di Scienze farmaceutiche,DISFARM Università degli Studi di Milano Via Venezian 21 Milano 20133 Italy
| | - Francesca Foschi
- Dipartimento di Scienze e Alta Tecnologie,DiSAT Università degli Studi dell'Insubria Via Valleggio 9 Como 20100 Italy
| | - Camilla Loro
- Dipartimento di Scienze e Alta Tecnologie,DiSAT Università degli Studi dell'Insubria Via Valleggio 9 Como 20100 Italy
| | - Emanuela Erba
- Dipartimento di Scienze farmaceutiche,DISFARM Università degli Studi di Milano Via Venezian 21 Milano 20133 Italy
| | - Maria Luisa Gelmi
- Dipartimento di Scienze farmaceutiche,DISFARM Università degli Studi di Milano Via Venezian 21 Milano 20133 Italy
| | - Sara Pellegrino
- Dipartimento di Scienze farmaceutiche,DISFARM Università degli Studi di Milano Via Venezian 21 Milano 20133 Italy
| |
Collapse
|
3
|
Dordoni F, Scarpi D, Bianchini F, Contini A, Occhiato EG. Enantioselective Synthesis of cis
and trans
4-Aminopipecolic Acids as γ-Amino Acids for the Construction of Cyclic RGD-Containing Peptidomimetics Antagonists of α V
β 3
Integrin. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000634] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Francesca Dordoni
- Dipartimento di Chimica “U. Schiff”; Università degli Studi di Firenze; Via della Lastruccia 13 50019 Sesto Fiorentino Italy
| | - Dina Scarpi
- Dipartimento di Chimica “U. Schiff”; Università degli Studi di Firenze; Via della Lastruccia 13 50019 Sesto Fiorentino Italy
| | - Francesca Bianchini
- Dipartimento di Scienze Biomediche Sperimentali e Cliniche “Mario Serio”; Università degli Studi di Firenze; Viale Morgagni 50 50134 Firenze Italy
| | - Alessandro Contini
- Dipartimento di Scienze Farmaceutiche; Università degli Studi di Milano; Via Venezian 21 20133 Milano Italy
| | - Ernesto G. Occhiato
- Dipartimento di Chimica “U. Schiff”; Università degli Studi di Firenze; Via della Lastruccia 13 50019 Sesto Fiorentino Italy
| |
Collapse
|
4
|
Lombardi C, Artuso E, Grandi E, Lolli M, Spyrakis F, Priola E, Prandi C. Recent advances in the synthesis of analogues of phytohormones strigolactones with ring-closing metathesis as a key step. Org Biomol Chem 2018; 15:8218-8231. [PMID: 28880031 DOI: 10.1039/c7ob01917c] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
In this paper, we synthesized and evaluated the biological activity of structural analogues of natural strigolactones in which the butenolide D-ring has been replaced with a γ-lactam. The key step to obtain the α,β-unsaturated-γ-lactam was an RCM on suitably substituted amides. Strigolactones (SLs) are plant hormones with various developmental functions. As soil signaling chemicals, they are required for establishing beneficial mycorrhizal plant/fungus symbiosis. Beside these auxinic roles, recently SLs have been successfully investigated as antitumoral agents. Peculiar to the SL perception system is the enzymatic activity of the hormone receptor. SARs data have shown that the presence of the butenolide D-ring is crucial to retain the biological activity. The substitution of the butenolide with a lactam might shed light on the mechanism of perception. In the following, a dedicated in silico study suggested the binding modes of the synthesized compounds to the receptor of SLs in plants.
Collapse
Affiliation(s)
- Chiara Lombardi
- Department of Chemistry, University of Turin, via P. Giuria 7 10125, Turin, Italy.
| | | | | | | | | | | | | |
Collapse
|
5
|
Sernissi L, Ricci L, Scarpi D, Bianchini F, Arosio D, Contini A, Occhiato EG. Stereodivergent synthesis of 5-aminopipecolic acids and application in the preparation of a cyclic RGD peptidomimetic as a nanomolar αVβ3 integrin ligand. Org Biomol Chem 2018; 16:3402-3414. [DOI: 10.1039/c8ob00534f] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
A stereodivergent preparation of trans and cis-5-aminopipecolic acids (5-APAs) was developed to obtain constrained amino acids useful for peptidomimetics.
Collapse
Affiliation(s)
- Lorenzo Sernissi
- Dipartimento di Chimica “U. Schiff”
- Università degli Studi di Firenze
- I-50019 Sesto Fiorentino
- Italy
| | - Luciano Ricci
- Dipartimento di Chimica “U. Schiff”
- Università degli Studi di Firenze
- I-50019 Sesto Fiorentino
- Italy
| | - Dina Scarpi
- Dipartimento di Chimica “U. Schiff”
- Università degli Studi di Firenze
- I-50019 Sesto Fiorentino
- Italy
| | - Francesca Bianchini
- Department of Biomedical
- Experimental and Clinical Sciences “Mario Serio”
- University of Florence
- Florence
- Italy
| | - Daniela Arosio
- Istituto di Scienze e Tecnologie Molecolari (I.S.T.M.)
- Consiglio Nazionale delle Ricerche (C.N.R.)
- I-20133 Milano
- Italy
| | - Alessandro Contini
- Dipartimento di Scienze Farmaceutiche
- Università degli Studi di Milano
- I-20133 Milan
- Italy
| | - Ernesto G. Occhiato
- Dipartimento di Chimica “U. Schiff”
- Università degli Studi di Firenze
- I-50019 Sesto Fiorentino
- Italy
| |
Collapse
|
6
|
Ricci L, Sernissi L, Scarpi D, Bianchini F, Contini A, Occhiato EG. Synthesis and conformational analysis of peptides embodying 2,3-methanopipecolic acids. Org Biomol Chem 2017; 15:6826-6836. [DOI: 10.1039/c7ob01617d] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
When 2,3-methanopipecolic acids replace a proline in peptides, a marked preference (42–92%) for thecisgeometry around the pipecolic amide bond is observed in both water and organic solvents.
Collapse
Affiliation(s)
- Luciano Ricci
- Department of Chemistry “U. Schiff”
- University of Florence
- Sesto Fiorentino
- Italy
| | - Lorenzo Sernissi
- Department of Chemistry “U. Schiff”
- University of Florence
- Sesto Fiorentino
- Italy
| | - Dina Scarpi
- Department of Chemistry “U. Schiff”
- University of Florence
- Sesto Fiorentino
- Italy
| | - Francesca Bianchini
- Department of Biomedical
- Experimental and Clinical Sciences “Mario Serio”
- University of Florence
- Florence
- Italy
| | - Alessandro Contini
- Department of Pharmaceutical Sciences
- University of Milan
- I-20133 Milan
- Italy
| | - Ernesto G. Occhiato
- Department of Chemistry “U. Schiff”
- University of Florence
- Sesto Fiorentino
- Italy
| |
Collapse
|
7
|
Cyclic RGD peptidomimetics containing 4- and 5-amino-cyclopropane pipecolic acid (CPA) templates as dual αVβ3 and α5β1 integrin ligands. Bioorg Med Chem 2016; 24:703-11. [DOI: 10.1016/j.bmc.2015.12.039] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2015] [Revised: 12/15/2015] [Accepted: 12/23/2015] [Indexed: 11/16/2022]
|
8
|
Scarpi D, Begliomini S, Prandi C, Oppedisano A, Deagostino A, Gómez-Bengoa E, Fiser B, Occhiato EG. Gold-Catalysed Synthesis of Exocyclic Vinylogous Amides and β-Amino Ketones: A Detailed Study on the 5-exo/6-endo-digSelectivity, Methodology and Scope. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500205] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
|
9
|
Matsuya Y, Yin S, Taneda H, Li B, Zhou D, Minato D, Sugimoto K. Preparation of (2R,4S)/(2S,4S)-4-Hydroxypipecolinic Acid Derivatives from L-(–)-Malic Acid. HETEROCYCLES 2015. [DOI: 10.3987/com-14-s(k)52] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|
10
|
Sernissi L, Petrović M, Scarpi D, Guarna A, Trabocchi A, Bianchini F, Occhiato EG. Cyclopropane Pipecolic Acids as Templates for Linear and Cyclic Peptidomimetics: Application in the Synthesis of an Arg-Gly-Asp (RGD)-Containing Peptide as an αvβ3Integrin Ligand. Chemistry 2014; 20:11187-203. [DOI: 10.1002/chem.201403077] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2014] [Indexed: 12/26/2022]
|
11
|
Wasilewska A, Woźniak BA, Doridot G, Piotrowska K, Witkowska N, Retailleau P, Six Y. Synthesis of Polycyclic Aminocyclobutane Systems by the Rearrangement ofN-(ortho-Vinylphenyl) 2-Azabicyclo[3.1.0]hexane Derivatives. Chemistry 2013; 19:11759-67. [DOI: 10.1002/chem.201300871] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2013] [Indexed: 11/12/2022]
|
12
|
Scarpi D, Bartali L, Casini A, Occhiato EG. Complementary and Stereodivergent Approaches to the Synthesis of 5-Hydroxy- and 4,5-Dihydroxypipecolic Acids from Enantiopure Hydroxylated Lactams. European J Org Chem 2013. [DOI: 10.1002/ejoc.201201429] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
13
|
Scarpi D, Bartali L, Casini A, Occhiato EG. Expeditious Racemic and Enantiodivergent Synthesis of 1-Deoxymannojirimycin and 1,4-Dideoxymannojirimycin. European J Org Chem 2012. [DOI: 10.1002/ejoc.201200022] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
|