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John EA, Riel AMS, Wieske LHE, Ray D, Decato DA, Boller M, Takacs Z, Erdélyi M, Bryantsev VS, Berryman OB. Taming Molecular Folding: Anion-Templated Foldamers with Tunable Quaternary Structures. J Am Chem Soc 2024. [PMID: 38842125 DOI: 10.1021/jacs.3c14820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2024]
Abstract
Higher-order foldamers represent a unique class of supramolecules at the forefront of molecular design. Herein we control quaternary folding using a novel approach that combines halogen bonding (XBing) and hydrogen bonding (HBing). We present the first anion-templated double helices induced by halogen bonds (XBs) and stabilized by "hydrogen bond enhanced halogen bonds" (HBeXBs). Our findings demonstrate that the number and orientation of hydrogen bond (HB) and XB donors significantly affect the quaternary structure and guest selectivity of two similar oligomers. This research offers new design elements to engineer foldamers and tailor their quaternary structure for specific guest binding.
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Affiliation(s)
- Eric A John
- Department of Chemistry and Biochemistry, University of Montana, Missoula, Montana 59812, United States
| | - Asia Marie S Riel
- Department of Chemistry and Biochemistry, University of Montana, Missoula, Montana 59812, United States
| | - Lianne H E Wieske
- Department of Chemistry─BMC, Organic Chemistry, Uppsala University, Husargatan 3, 752 37 Uppsala, Sweden
| | - Debmalya Ray
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States
| | - Daniel A Decato
- Department of Chemistry and Biochemistry, University of Montana, Missoula, Montana 59812, United States
| | - Madeleine Boller
- Department of Chemistry and Biochemistry, University of Montana, Missoula, Montana 59812, United States
| | - Zoltan Takacs
- Swedish NMR Center, University of Gothenburg, Gothenburg SE-405 30, Sweden
| | - Máté Erdélyi
- Department of Chemistry─BMC, Organic Chemistry, Uppsala University, Husargatan 3, 752 37 Uppsala, Sweden
| | - Vyacheslav S Bryantsev
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States
| | - Orion B Berryman
- Department of Chemistry and Biochemistry, University of Montana, Missoula, Montana 59812, United States
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2
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Fazal M, Ali I, Imran M, Ahmed F, Farghalya TA, Althagafi II, ShafiUllah, Ali M, Shah MR. A colorimetric probe sensor based on triazoles for detecting ammonium sulfate in laboratory tap water and blood plasma. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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3
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Foyle ÉM, White NG. Anion Templated Supramolecular Structures Assembled using 1,2,3-Triazole and Triazolium motifs. Chem Asian J 2021; 16:575-587. [PMID: 33576575 DOI: 10.1002/asia.202100040] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 02/03/2021] [Indexed: 12/12/2022]
Abstract
The use of 1,2,3-triazole and triazolium motifs to construct anion templated supramolecular structures has grown rapidly over the past decade and has enabled a range of complex structures to be synthesised. In this Minireview we highlight the significant advances that have been made in areas such as foldamers, polymers and interlocked systems.
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Affiliation(s)
- Émer M Foyle
- Research School of Chemistry, The Australian National University, Canberra, ACT, Australia
| | - Nicholas G White
- Research School of Chemistry, The Australian National University, Canberra, ACT, Australia
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4
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Abstract
Using anions to induce molecular structure is a rapidly growing area of dynamic and switchable supramolecular chemistry. The emphasis of this review is on helical anion foldamers in solution, and many of the beautiful complexes described herein are accentuated by their crystal structures. Anion foldamers are defined as single- or multistrand complexes-often helical-that incorporate one or more anions. The review begins by discussing foldamer structure and nomenclature and follows with discourse on the anions which are employed. Recent advances in functional foldamers that bind a single anion are examined, including: induced chirality, stimuli-responsive dynamics, fluorescence changes, organocatalysis, anion transport, and halogen bonding. The review then inspects multianion foldamers, and this section is organized by the number of strands within the foldamer-from single- to triple-strand foldamers. Finally, the review is punctuated by recent hydrogen- and halogen-bonding triple-strand anion foldamers.
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Affiliation(s)
- Eric A John
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive, Missoula, Montana 59812, United States
| | - Casey J Massena
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive, Missoula, Montana 59812, United States
| | - Orion B Berryman
- Department of Chemistry and Biochemistry, University of Montana, 32 Campus Drive, Missoula, Montana 59812, United States
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5
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Sengoku T, Ikeda I, Ai K, Takahashi M, Yoda H. Indium- and zinc-catalyzed enantioselective amide propargylation of aldehydes with stannylated allenyl amides. Org Biomol Chem 2019; 17:2614-2618. [PMID: 30762059 DOI: 10.1039/c9ob00040b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The catalytic enantioselective propargylation of aldehydes with newly prepared stannyl allenyl amides is described. The reaction has been accomplished by using catalytic amounts of indium chloride, zinc chloride, and a chiral BINOL derivative, affording amide-functionalized homopropargyl alcohols in excellent yields and enantioselectivities.
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Affiliation(s)
- Tetsuya Sengoku
- Department of Applied Chemistry, Faculty of Engineering, Shizuoka University, 3-5-1 Johoku, Naka-ku, Hamamatsu 432-8561, Japan.
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6
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Parks FC, Liu Y, Debnath S, Stutsman SR, Raghavachari K, Flood AH. Allosteric Control of Photofoldamers for Selecting between Anion Regulation and Double-to-Single Helix Switching. J Am Chem Soc 2018; 140:17711-17723. [DOI: 10.1021/jacs.8b10538] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Fred C. Parks
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Yun Liu
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Sibali Debnath
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Sydney R. Stutsman
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Krishnan Raghavachari
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Amar H. Flood
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
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7
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Jakubkiene V, Vaiciunaite E, Kriukaite K, Didzgalvis J, Tumkevicius S. Efficient synthesis of novel 6-substituted 2-(4-aryl-1,2,3-triazol-1-yl)pyrimidines and 7-deazapurines. SYNTHETIC COMMUN 2018. [DOI: 10.1080/00397911.2018.1474229] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- V. Jakubkiene
- Department of Organic Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Vilnius, Lithuania
| | - E. Vaiciunaite
- Department of Organic Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Vilnius, Lithuania
| | - K. Kriukaite
- Department of Organic Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Vilnius, Lithuania
| | - J. Didzgalvis
- Department of Organic Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Vilnius, Lithuania
| | - S. Tumkevicius
- Department of Organic Chemistry, Faculty of Chemistry and Geosciences, Vilnius University, Vilnius, Lithuania
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Kwiatkowski A, Jędrzejewska B, Józefowicz M, Grela I, Ośmiałowski B. The trans/cis photoisomerization in hydrogen bonded complexes with stability controlled by substituent effects: 3-(6-aminopyridin-3-yl)acrylate case study. RSC Adv 2018; 8:23698-23710. [PMID: 35540258 PMCID: PMC9081750 DOI: 10.1039/c8ra03042a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Accepted: 06/19/2018] [Indexed: 01/29/2023] Open
Abstract
The association of aminopyridine-based acrylic acid and its salt was studied by NMR titration experiments. The AA (acceptor, acceptor) hydrogen-bonding pattern present in the salt forms a complex readily with a DD (donor, donor) hydrogen-bonding pattern of the substituted ureas even in polar and competitive environment. The double carbon–carbon bond in the acrylic acid derivative is subjected to photoisomerization. This is dependent on the association with substituted urea derivatives. The substituent in ureas influences the trans/cis isomerization kinetics and position of the photostationary state. Two mechanisms that influence the photoisomerization were proposed. To the best of our knowledge, the trans/cis photoisomerization influenced by the substituent in such a hydrogen-bonding pattern has not observed previously. It was shown that interaction with urea derivatives causes lowering of the trans-to-cis photoreaction rates. The association of aminopyridine-based acrylic acid and its salt was studied by NMR titration experiments.![]()
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Affiliation(s)
- Adam Kwiatkowski
- Faculty of Chemical Technology and Engineering
- UTP University of Science and Technology
- PL-85326 Bydgoszcz
- Poland
| | - Beata Jędrzejewska
- Faculty of Chemical Technology and Engineering
- UTP University of Science and Technology
- PL-85326 Bydgoszcz
- Poland
| | - Marek Józefowicz
- Faculty of Mathematics
- Physics and Informatics
- University of Gdańsk
- 80-308 Gdańsk
- Poland
| | - Izabela Grela
- Faculty of Chemical Technology and Engineering
- UTP University of Science and Technology
- PL-85326 Bydgoszcz
- Poland
| | - Borys Ośmiałowski
- Faculty of Chemistry
- Nicolaus Copernicus University in Toruń
- 87-100 Torun
- Poland
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9
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Mungalpara D, Kelm H, Valkonen A, Rissanen K, Keller S, Kubik S. Oxoanion binding to a cyclic pseudopeptide containing 1,4-disubstituted 1,2,3-triazole moieties. Org Biomol Chem 2017; 15:102-113. [DOI: 10.1039/c6ob02172g] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The converging arrangement of hydrogen bond donors from amide NH and 1,2,3-triazole CH groups enables the described cyclic pseudopeptide to interact with oxoanions in water/DMSO mixtures.
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Affiliation(s)
- Disha Mungalpara
- Technische Universität Kaiserslautern
- Fachbereich Chemie – Organische Chemie
- 67663 Kaiserslautern
- Germany
| | - Harald Kelm
- Technische Universität Kaiserslautern
- Fachbereich Chemie – Anorganische Chemie
- 67663 Kaiserslautern
- Germany
| | - Arto Valkonen
- University of Jyvaskyla
- Department of Chemistry
- Nanoscience Center
- Jyvaskyla FI-40014
- Finland
| | - Kari Rissanen
- University of Jyvaskyla
- Department of Chemistry
- Nanoscience Center
- Jyvaskyla FI-40014
- Finland
| | - Sandro Keller
- University of Kaiserslautern
- Molecular Biophysics
- 67663 Kaiserslautern
- Germany
| | - Stefan Kubik
- Technische Universität Kaiserslautern
- Fachbereich Chemie – Organische Chemie
- 67663 Kaiserslautern
- Germany
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10
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Memon S, Bhatti AA, Bhatti AA, Ocak Ü, Ocak M. Calix[4]arene Based Dual Fluorescent Sensor for Al3+ and S2O7 2−. J Fluoresc 2016; 26:1591-9. [DOI: 10.1007/s10895-016-1843-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2015] [Accepted: 05/30/2016] [Indexed: 01/12/2023]
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11
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Wang Y, Zhao W, Bie F, Wu L, Li X, Jiang H. Ruthenium(II) Complexes of Aryl Triazole Foldamers as Receptors for Anions. Chemistry 2016; 22:5233-42. [PMID: 26918407 DOI: 10.1002/chem.201504910] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2015] [Indexed: 12/15/2022]
Abstract
Ruthenium(II) complexes of oligo(bipyridine-phenyl triazole)s were synthesized as receptors for anions. The receptors, which are partially preorganized through metal-ligand interactions, can fold into a helical conformation to bind chloride, bromide, iodide, or nitrate anions in their inner cavities in acetone or competitive H-bonding media such as 5% water in acetone and DMSO. The short oligomer 1 can sandwich the studied anions with high affinity in acetone. Addition of 5% water to acetone results in overall decreases in the binding strength due to the binding competition from water, but does not change the basic binding mode. The highly competitive H-bonding solvent DMSO causes the receptor-anion interactions to become even weaker. However, in DMSO, the short receptor 1 is still able to bind the halide anions with moderate affinities in a 1:1 stoichiometry, whereas the longer oligomer 2 forms double-strand helices with an anion wrapped inside for all anions investigated so far.
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Affiliation(s)
- Ying Wang
- Key Laboratory of Theoretical and Computational Photochemistry and Key Laboratory of Radiopharmaceuticals of Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, P.R. China.
| | - Wei Zhao
- Key Laboratory of Theoretical and Computational Photochemistry and Key Laboratory of Radiopharmaceuticals of Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, P.R. China.,Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P.R. China.,University of Chinese Academy of Sciences, Beijing, 100049, P.R. China
| | - Fusheng Bie
- Key Laboratory of Theoretical and Computational Photochemistry and Key Laboratory of Radiopharmaceuticals of Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, P.R. China.,Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P.R. China
| | - Le Wu
- Key Laboratory of Theoretical and Computational Photochemistry and Key Laboratory of Radiopharmaceuticals of Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, P.R. China
| | - Xichen Li
- Key Laboratory of Theoretical and Computational Photochemistry and Key Laboratory of Radiopharmaceuticals of Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, P.R. China
| | - Hua Jiang
- Key Laboratory of Theoretical and Computational Photochemistry and Key Laboratory of Radiopharmaceuticals of Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, P.R. China. .,Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P.R. China.
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12
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Bucevicius J, Skardziute L, Dodonova J, Kazlauskas K, Bagdziunas G, Jursenas S, Tumkevicius S. 2,4-Bis(4-aryl-1,2,3-triazol-1-yl)pyrrolo[2,3-d]pyrimidines: synthesis and tuning of optical properties by polar substituents. RSC Adv 2015. [DOI: 10.1039/c5ra05482f] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
Novel D–π–A–π–D type chromophores – 2,4-bis(4-aryl-1,2,3-triazol-1-yl)pyrrolo[2,3-d]pyrimidines were prepared and their photophysical, electrochemical properties in conjunction with quantum chemical calculations were investigated.
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Affiliation(s)
- Jonas Bucevicius
- Vilnius University
- Department of Organic Chemistry
- LT-03225 Vilnius
- Lithuania
| | - Lina Skardziute
- Institute of Applied Research
- Vilnius University
- LT-10222 Vilnius
- Lithuania
| | - Jelena Dodonova
- Vilnius University
- Department of Organic Chemistry
- LT-03225 Vilnius
- Lithuania
| | - Karolis Kazlauskas
- Institute of Applied Research
- Vilnius University
- LT-10222 Vilnius
- Lithuania
| | - Gintautas Bagdziunas
- Kaunas University of Technology
- Department of Polymer Chemistry and Technology
- LT-50254 Kaunas
- Lithuania
| | - Saulius Jursenas
- Institute of Applied Research
- Vilnius University
- LT-10222 Vilnius
- Lithuania
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13
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Lee S, Hua Y, Flood AH. β-Sheet-like Hydrogen Bonds Interlock the Helical Turns of a Photoswitchable Foldamer To Enhance the Binding and Release of Chloride. J Org Chem 2014; 79:8383-96. [DOI: 10.1021/jo501595k] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Semin Lee
- Chemistry Department, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Yuran Hua
- Chemistry Department, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Amar H. Flood
- Chemistry Department, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
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14
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Wang CY, Zou JF, Zheng ZJ, Huang WS, Li L, Xu LW. BINOL-linked 1,2,3-triazoles: an unexpected fluorescent sensor with anion–π interaction for iodide ions. RSC Adv 2014. [DOI: 10.1039/c4ra09589h] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
BINOL-derived triazoles could be used in organocatalytic silylation and unexpectedly as fluorescent sensors for the recognition of I−.
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Affiliation(s)
- Cai-Yun Wang
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education
- College of Material, Chemistry and Chemical Engineering
- Hangzhou Normal University
- Hangzhou 310012, P. R. China
| | - Jin-Feng Zou
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education
- College of Material, Chemistry and Chemical Engineering
- Hangzhou Normal University
- Hangzhou 310012, P. R. China
| | - Zhan-Jiang Zheng
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education
- College of Material, Chemistry and Chemical Engineering
- Hangzhou Normal University
- Hangzhou 310012, P. R. China
| | - Wei-Sheng Huang
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education
- College of Material, Chemistry and Chemical Engineering
- Hangzhou Normal University
- Hangzhou 310012, P. R. China
| | - Li Li
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education
- College of Material, Chemistry and Chemical Engineering
- Hangzhou Normal University
- Hangzhou 310012, P. R. China
| | - Li-Wen Xu
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education
- College of Material, Chemistry and Chemical Engineering
- Hangzhou Normal University
- Hangzhou 310012, P. R. China
- State Key Laboratory for Oxo Synthesis and Selective Oxidation
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15
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Gavette JV, Evoniuk CJ, Zakharov LN, Carnes ME, Haley MM, Johnson DW. Exploring Anion-Induced Conformational Flexibility and Molecular Switching in a Series of Heteroaryl-Urea Receptors. Chem Sci 2014; 5:2899-2905. [PMID: 24976946 PMCID: PMC4068745 DOI: 10.1039/c4sc00950a] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Anion binding studies of 1,10-phenanthroline- and 2-pyridyl-substituted urea-based receptors reveal that guest-dependent conformations exist in structural variants related to a previously investigated bipyridyl-based receptor. Dynamic conformational switching persists in a monofunctional pyridyl-urea receptor, and the preorganization provided by a phenanthroline-based analogue promotes convergence of anion coordinating groups to a single guest. Despite this predisposition for anion coordination, the conformational flexibility of the bipyridyl-based receptor provides the most selective motif for H2PO4- coordination. Furthermore, the two new phenanthrolyl- and pyridyl-receptors serve as models of the bipyridyl-based receptor, elucidating accurate stepwise association constants for 1:2 host/guest binding by this receptor, and suggest that oxoanions prefer the embrace of a "U" conformation in 1:1 complexes.
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Affiliation(s)
- Jesse V Gavette
- Department of Chemistry & Biochemistry and Materials Science Institute, University of Oregon, Eugene, OR, 97403-1253, USA
| | - Christopher J Evoniuk
- Department of Chemistry & Biochemistry and Materials Science Institute, University of Oregon, Eugene, OR, 97403-1253, USA
| | - Lev N Zakharov
- CAMCOR-Center for Advanced Materials Characterization in Oregon, University of Oregon, Eugene, OR, 97403, USA
| | - Matthew E Carnes
- Department of Chemistry & Biochemistry and Materials Science Institute, University of Oregon, Eugene, OR, 97403-1253, USA
| | - Michael M Haley
- Department of Chemistry & Biochemistry and Materials Science Institute, University of Oregon, Eugene, OR, 97403-1253, USA
| | - Darren W Johnson
- Department of Chemistry & Biochemistry and Materials Science Institute, University of Oregon, Eugene, OR, 97403-1253, USA
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