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Burhop A, Bag S, Grigalunas M, Woitalla S, Bodenbinder P, Brieger L, Strohmann C, Pahl A, Sievers S, Waldmann H. Synthesis of Indofulvin Pseudo-Natural Products Yields a New Autophagy Inhibitor Chemotype. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2021; 8:e2102042. [PMID: 34346568 PMCID: PMC8498912 DOI: 10.1002/advs.202102042] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 07/14/2021] [Indexed: 06/01/2023]
Abstract
Chemical and biological limitations in bioactive compound design based on natural product (NP) structure can be overcome by the combination of NP-derived fragments in unprecedented arrangements to afford "pseudo-natural products" (pseudo-NPs). A new pseudo-NP design principle is described, i.e., the combination of NP-fragments by transformations that are not part of current biosynthesis pathways. A collection of indofulvin pseudo-NPs is obtained from 2-hydroxyethyl-indoles and ketones derived from the fragment-sized NP griseofulvin by means of an iso-oxa-Pictet-Spengler reaction. Cheminformatic analysis indicates that the indofulvins reside in an area of chemical space sparsely covered by NPs, drugs, and drug-like compounds and they may combine favorable properties of these compound classes. Biological evaluation of the compound collection in different cell-based assays and the unbiased high content cell painting assay reveal that the indofulvins define a new autophagy inhibitor chemotype that targets mitochondrial respiration.
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Affiliation(s)
- Annina Burhop
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
- Technical University DortmundFaculty of ChemistryChemical BiologyDortmund44227Germany
| | - Sukdev Bag
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
| | - Michael Grigalunas
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
| | - Sophie Woitalla
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
- Technical University DortmundFaculty of ChemistryChemical BiologyDortmund44227Germany
| | - Pia Bodenbinder
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
- Technical University DortmundFaculty of ChemistryChemical BiologyDortmund44227Germany
| | - Lukas Brieger
- Technical University DortmundFaculty of ChemistryInorganic ChemistryDortmund44227Germany
| | - Carsten Strohmann
- Technical University DortmundFaculty of ChemistryInorganic ChemistryDortmund44227Germany
| | - Axel Pahl
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
- Compound Management and Screening CenterDortmund44227Germany
| | - Sonja Sievers
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
- Compound Management and Screening CenterDortmund44227Germany
| | - Herbert Waldmann
- Max Planck Institute of Molecular PhysiologyDepartment of Chemical BiologyDortmund44227Germany
- Technical University DortmundFaculty of ChemistryChemical BiologyDortmund44227Germany
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Ourhzif EM, Pâris A, Abrunhosa-Thomas I, Ketatni EM, Chalard P, Khouili M, Daniellou R, Troin Y, Akssira M. Design, synthesis, and evaluation of cytotoxic activities of arylnaphthalene lignans and aza-analogs. Arch Pharm (Weinheim) 2021; 354:e2000479. [PMID: 33586249 DOI: 10.1002/ardp.202000479] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 01/11/2021] [Accepted: 01/15/2021] [Indexed: 11/10/2022]
Abstract
A concise and versatile synthetic strategy for the total synthesis of arylnaphthalene lignans and aza-analogs was developed. The main objective was to develop synthetic tactics for the creation of the lactone and lactam unit that would give access to an array of synthetic, natural, and/or bioactive compounds through rather simple chemical manipulation. The flexibility and potentiality of these new processes were further illustrated by the total synthesis of retrojusticidin B (13b), justicidin C (14b), and methoxy-vitedoamine A (22a). In this study, a series of novel aryl-naphthalene lignans and aza-analogs were synthesized, and the cytotoxic activities of all compounds on cancer cell growth were evaluated. The target compounds were structurally characterized by 1 H NMR (nuclear magnetic resonance), 13 C NMR, infrared, high-resolution mass spectrometry, and X-ray crystallography. The IC50 values of these compounds on five tumor cell lines (A549, HS683, MCF-7, SK-MEL-28, and B16-F1) were obtained by MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) colorimetric assay. Five of the compounds exhibited excellent activity compared to 5-fluorouracil and etoposide against the five cell lines tested, with IC50 values ranging from 1 to 10 μM.
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Affiliation(s)
- El-Mahdi Ourhzif
- SIGMA Clermont, ICCF, Université Clermont Auvergne, CNRS, Clermont-Ferrand, France.,Laboratoire de Chimie Physique et Chimie Bioorganique, FST, Université Hassan II Casablanca, Mohammedia, Morocco
| | - Arnaud Pâris
- Institut de Chimie Organique et Analytique (ICOA), Université d'Orléans/CNRS, UMR 7311, Orléans, France
| | | | - El Mostafa Ketatni
- Laboratoire de Chimie Organique et Analytique, FST, Université Sultan Moulay Slimane, Beni-Mellal, Morocco
| | - Pierre Chalard
- SIGMA Clermont, ICCF, Université Clermont Auvergne, CNRS, Clermont-Ferrand, France
| | - Mostafa Khouili
- Laboratoire de Chimie Organique et Analytique, FST, Université Sultan Moulay Slimane, Beni-Mellal, Morocco
| | - Richard Daniellou
- Institut de Chimie Organique et Analytique (ICOA), Université d'Orléans/CNRS, UMR 7311, Orléans, France
| | - Yves Troin
- SIGMA Clermont, ICCF, Université Clermont Auvergne, CNRS, Clermont-Ferrand, France
| | - Mohamed Akssira
- Laboratoire de Chimie Physique et Chimie Bioorganique, FST, Université Hassan II Casablanca, Mohammedia, Morocco
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Kopp J, Brückner R. Stereoselective Total Synthesis of the Dimeric Naphthoquinonopyrano-γ-lactone (-)-Crisamicin A: Introducing the Dimerization Site by a Late-Stage Hartwig Borylation. Org Lett 2020; 22:3607-3612. [PMID: 32298125 DOI: 10.1021/acs.orglett.0c01078] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The first stereoselective total synthesis of the dimeric naphthoquinonopyrano-γ-lactone (-)-crisamicin A was realized (13 steps, 5% overall yield). 1,4,5-Trimethoxynaphthalene, reached in five known steps, was brominated at C-3 to install a but-3-enoic ester by an ensuing Heck coupling. An asymmetric Sharpless dihydroxylation followed and gave a β-hydroxy-γ-lactone with >99.9% ee. Its OH substituent and acetaldehyde established the dihydropyran ring in a completely diastereoselective oxa-Pictet-Spengler cyclization. The 2,3-fused anisole moiety allowed the C5-H bond under Hartwig's conditions to be borylated. This set the stage for engaging the resulting C5-B bond in an oxidative dimerization, which led to a binaphthohydroquinon-5-yl. The latter was advanced to synthetic crisamicin A by a double CAN oxidation (→ a binaphthoquinon-5-yl) and a double demethylation.
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Affiliation(s)
- Julia Kopp
- Institut für Organische Chemie, Albert-Ludwigs-Universität, Albertstr. 21, D-79104 Freiburg, Germany
| | - Reinhard Brückner
- Institut für Organische Chemie, Albert-Ludwigs-Universität, Albertstr. 21, D-79104 Freiburg, Germany
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Yang Y, Lu Z, Xu X. Phenacyl Xanthates: A Photoremovable Protecting Group for Alcohols under Visible Light. ASIAN J ORG CHEM 2019. [DOI: 10.1002/ajoc.201900576] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Yong‐Qing Yang
- School of PharmacyJiangsu University No. 301 Xuefu Road Zhenjiang, Jiangsu Province 212013 China
| | - Zheng Lu
- School of PharmacyJiangsu University No. 301 Xuefu Road Zhenjiang, Jiangsu Province 212013 China
| | - Ximing Xu
- School of PharmacyJiangsu University No. 301 Xuefu Road Zhenjiang, Jiangsu Province 212013 China
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Ninomiya M, Ando Y, Kudo F, Ohmori K, Suzuki K. Total Synthesis of Actinorhodin. Angew Chem Int Ed Engl 2019; 58:4264-4270. [DOI: 10.1002/anie.201814172] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Indexed: 12/18/2022]
Affiliation(s)
- Mamiko Ninomiya
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Yoshio Ando
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Fumitaka Kudo
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Ken Ohmori
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Keisuke Suzuki
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
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Ninomiya M, Ando Y, Kudo F, Ohmori K, Suzuki K. Total Synthesis of Actinorhodin. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201814172] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Mamiko Ninomiya
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Yoshio Ando
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Fumitaka Kudo
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Ken Ohmori
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
| | - Keisuke Suzuki
- Department of ChemistryTokyo Institute of Technology 2-12-1 O-okayama, Meguro-ku Tokyo 152-8551 Japan
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Takikawa H, Nishii A, Sakai T, Suzuki K. Aryne-based strategy in the total synthesis of naturally occurring polycyclic compounds. Chem Soc Rev 2018; 47:8030-8056. [DOI: 10.1039/c8cs00350e] [Citation(s) in RCA: 164] [Impact Index Per Article: 27.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
This review has outlined the strategies and tactics of using arynes in the total syntheses of polycyclic natural products.
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Affiliation(s)
- Hiroshi Takikawa
- Graduate School of Pharmaceutical Sciences
- Kyoto University
- Kyoto 606-8501
- Japan
| | - Arata Nishii
- Department of Chemistry
- Tokyo Institute of Technology
- Tokyo 152-8551
- Japan
| | - Takahiro Sakai
- Department of Chemistry
- Tokyo Institute of Technology
- Tokyo 152-8551
- Japan
| | - Keisuke Suzuki
- Department of Chemistry
- Tokyo Institute of Technology
- Tokyo 152-8551
- Japan
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Neumeyer M, Kopp J, Brückner R. Controlling the Substitution Pattern of Hexasubstituted Naphthalenes by Aryne/Siloxyfuran Diels-Alder Additions: Regio- and Stereocontrolled Synthesis of Arizonin C1 Analogs. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700195] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Markus Neumeyer
- Institut für Organische Chemie; Albert-Ludwigs-Universität; Albertstraße 21 79104 Freiburg Germany
| | - Julia Kopp
- Institut für Organische Chemie; Albert-Ludwigs-Universität; Albertstraße 21 79104 Freiburg Germany
| | - Reinhard Brückner
- Institut für Organische Chemie; Albert-Ludwigs-Universität; Albertstraße 21 79104 Freiburg Germany
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