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Saura-Sanmartin A. Light-responsive rotaxane-based materials: inducing motion in the solid state. Beilstein J Org Chem 2023; 19:873-880. [PMID: 37346498 PMCID: PMC10280056 DOI: 10.3762/bjoc.19.64] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Accepted: 06/05/2023] [Indexed: 06/23/2023] Open
Abstract
Light-responsive rotaxane-based solid-state materials are ideal scaffolds in order to develop smart materials due to the properties provided by the mechanical bond, such as control over the dynamics of the components upon application of external stimuli. This perspective aims to highlight the relevance of these materials, by pointing out recent examples of photoresponsive materials prepared from a rotaxanated architecture in which motion of the counterparts and/or macroscopic motion of the interlocked materials are achieved. Although further development is needed, these materials are envisioned as privileged scaffolds which will be used for different advanced applications in the area of molecular machinery.
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Affiliation(s)
- Adrian Saura-Sanmartin
- Departamento de Química Orgánica, Facultad de Química, Universidad de Murcia, 30100 Murcia, Spain
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2
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Teixeira Campos P, Karkow Bones M, Siqueira da Silva RM. Energetic and Topological Supramolecular Study and Nucleation Mechanism Proposal of Halogenated Phenols. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Patrick Teixeira Campos
- Instituto Federal Sul-rio-grandense Engenharia Química Praça 20 de Setembro, 455 96015-360 Pelotas BRAZIL
| | - Mariana Karkow Bones
- Instituto Federal Sul-rio-grandense - Campus Pelotas: Instituto Federal de Educacao Ciencia e Tecnologia Sul-rio-grandense Engenharia Química Praça 20 de Setembro, 455 Pelotas BRAZIL
| | - Rubia Mara Siqueira da Silva
- Instituto Federal Sul-rio-grandense - Campus Pelotas: Instituto Federal de Educacao Ciencia e Tecnologia Sul-rio-grandense Química Praça 20 de Setembro, 455 Pelotas BRAZIL
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3
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Weimer GH, Copetti JPP, Orlando T, Zanatta N, Bonacorso HG, Salbego PRS, Martins MAP. The role of attractive and repulsive interactions in the stabilization of ammonium salts structures. CrystEngComm 2022. [DOI: 10.1039/d2ce00891b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of ammonium salts was used to propose a step-by-step approach to obtain the stabilization energy and contact area data of supramolecular clusters in charged molecules. A new parameter was presented to assess the cluster energy efficiency.
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Affiliation(s)
- Gustavo H. Weimer
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - João P. P. Copetti
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Tainára Orlando
- Department of Chemistry, Federal University of Maranhão (UFMA), São Luís, MA, Brazil
| | - Nilo Zanatta
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Helio G. Bonacorso
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Paulo R. S. Salbego
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Engineering and Environmental Technology (DETA), Federal University of Santa Maria (UFSM), Frederico Westphalen Campus, RS, Brazil
| | - Marcos A. P. Martins
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
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4
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Orlando T, Lopes LC, Neumann DAM, Andrade VP, Mittersteiner M, Rocha CQ, Zanatta N, Bonacorso HG, Martins MAP, Salbego PRS. Uncovering the origins of supramolecular similarity in a series of benzimidazole structures. CrystEngComm 2022. [DOI: 10.1039/d2ce00909a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Quantitative similarity indices (IX) were combined with crystallization mechanism proposals to shed more light on the origins of the supramolecular similarity between a series of benzimidazole derivative structures.
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Affiliation(s)
- Tainára Orlando
- Department of Chemistry, Federal University of Maranhão (UFMA), São Luís, MA, Brazil
| | - Leandro C. Lopes
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Darlon A. M. Neumann
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Valquiria P. Andrade
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Mateus Mittersteiner
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Cláudia Q. Rocha
- Department of Chemistry, Federal University of Maranhão (UFMA), São Luís, MA, Brazil
| | - Nilo Zanatta
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Helio G. Bonacorso
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Marcos A. P. Martins
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria, RS, Brazil
| | - Paulo R. S. Salbego
- Núcleo de Química de Heterociclos (NUQUIMHE), Department of Engineering and Environmental Technology (DETA), Federal University of Santa Maria (UFSM), Frederico Westphalen Campus, RS, Brazil
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Pagliari A, Meyer AR, Solner V, Rosa JML, Hoerner M, Gauze Bonacorso H, Zanatta N, Martins MAP. Effect of Hydrogen Bonds and π...π-interactions on the Crystallization of Phenyl-perfluorophenyl Amides: Understanding the Self-organization of a Cocrystal. CrystEngComm 2022. [DOI: 10.1039/d2ce00231k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of N-arylbenzamides containing amide group and phenyl−perfluorinated rings were used as the smallest molecules to investigate the direct influence of hydrogen bond and aromatic donor-acceptor complementarity in the...
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Chan SM, Tang FK, Lam CY, Kwan CS, Hau SCK, Leung KCF. π-Stacking Stopper-Macrocycle Stabilized Dynamically Interlocked [2]Rotaxanes. Molecules 2021; 26:4704. [PMID: 34361858 PMCID: PMC8347712 DOI: 10.3390/molecules26154704] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 07/30/2021] [Accepted: 08/01/2021] [Indexed: 11/16/2022] Open
Abstract
The synthesis of mechanically interlocked molecules is valuable due to their unique topologies. With π-stacking intercomponent interaction, e.g., phenanthroline and anthracene, novel [2]rotaxanes have been synthesized by dynamic imine clipping reaction. Their X-ray crystal structures indicate the π-stackings between the anthracene moiety (stopper) on the thread and the (hetero)aromatic rings at the macrocycle of the rotaxanes. Moreover, the length of glycol chains affects the extra π-stacking intercomponent interactions between the phenyl groups and the dimethoxy phenyl groups on the thread. Dynamic combinatorial library has shown at best 84% distribution of anthracene-threaded phenanthroline-based rotaxane, coinciding with the crystallography in that the additional π-stacking intercomponent interactions could increase the thermodynamic stability and selectivity of the rotaxanes.
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Affiliation(s)
- Sing-Ming Chan
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (S.-M.C.); (F.-K.T.); (C.-Y.L.); (C.-S.K.)
| | - Fung-Kit Tang
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (S.-M.C.); (F.-K.T.); (C.-Y.L.); (C.-S.K.)
| | - Ching-Yau Lam
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (S.-M.C.); (F.-K.T.); (C.-Y.L.); (C.-S.K.)
| | - Chak-Shing Kwan
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (S.-M.C.); (F.-K.T.); (C.-Y.L.); (C.-S.K.)
| | - Sam C. K. Hau
- Department of Chemistry, The Chinese University of Hong Kong, Shatin, NT, Hong Kong, China
| | - Ken Cham-Fai Leung
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (S.-M.C.); (F.-K.T.); (C.-Y.L.); (C.-S.K.)
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Salbego PR, Weimer GH, Meyer AR, Soek RN, Garbelini ER, Nunes FS, Zanatta N, Bonacorso HG, Hörner M, Martins MA. Formation of a penta- or hexacoordinated Cu−(II) semicarbazone complex: Revisiting semicarbazone metal complexes. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.129942] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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P. Copetti JP, Salbego PRS, Orlando T, Rosa JML, Fiss GF, G. de Oliveira JP, A. Vasconcellos MLA, Zanatta N, G. Bonacorso H, Martins MAP. Substituent effects on the crystallization mechanisms of 7-chloro-4-substituted-quinolines. CrystEngComm 2020. [DOI: 10.1039/d0ce00214c] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The crystallization mechanisms of a series of fourteen 7-chloro-4-substituted-quinolines were proposed based on a retrocrystallization approach using the supramolecular cluster as demarcation.
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Affiliation(s)
- João P. P. Copetti
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
| | - Paulo R. S. Salbego
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
| | - Tainára Orlando
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
| | - Jéssica M. L. Rosa
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
| | - Gabriela F. Fiss
- Department of Chemistry
- Federal University of Paraíba (UFPB)
- João Pessoa
- Brazil
| | | | | | - Nilo Zanatta
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
| | - Helio G. Bonacorso
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
| | - Marcos A. P. Martins
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Department of Chemistry
- Federal University of Santa Maria (UFSM)
- Santa Maria
- Brazil
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9
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Salbego PRS, Bender CR, Orlando T, Moraes GA, Copetti JPP, Weimer GH, Bonacorso HG, Zanatta N, Hoerner M, Martins MAP. Supramolecular Similarity in Polymorphs: Use of Similarity Indices (I X). ACS OMEGA 2019; 4:9697-9709. [PMID: 31460060 PMCID: PMC6648757 DOI: 10.1021/acsomega.8b03660] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2018] [Accepted: 05/08/2019] [Indexed: 05/11/2023]
Abstract
A systematic investigation to assess the degree of similarity between polymorphs was carried out. A similarity indices (IX) approach was applied in ten series of polymorphs with different characteristics and number of molecules in the asymmetric unit. Geometric (ID), contact area (IC), and stabilization energy (IG) parameters were used. It was possible to situate each comparison in different regions of similarity within the polymorphism phenomenon and determine the boundaries between quasi-isostructural polymorphs and polymorphs of low similarity. The multiparameter IDCG index was used as a robust tool to determine the total similarity within the polymorphism phenomenon. The highest contribution of the stabilization energy parameter (45%) toward the final value of similarity (IDCG) was observed, followed by the contact area index (32%). The geometric index contributed approximately 23% to the final value of IDCG. This information reinforces the importance of the contact area and stabilization energy in assessing the degree of similarity between crystalline structures. A new descriptor (IQ) based on the comparison of the energetic contribution of intermolecular interaction types present in each crystal structure is presented. IQ can be a versatile tool and applicable even for systems that do not share any similarity.
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Affiliation(s)
- Paulo R. S. Salbego
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
- E-mail: (P.R.S.S.)
| | - Caroline R. Bender
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Tainára Orlando
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Guilherme A. Moraes
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - João P. P. Copetti
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Gustavo H. Weimer
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Helio G. Bonacorso
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Nilo Zanatta
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Manfredo Hoerner
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
| | - Marcos A. P. Martins
- Núcleo de Química
de Heterociclos (NUQUIMHE) and Núcleo
de Investigação de Triazenos e Complexos (NITRICO),
Department of Chemistry, Federal University
of Santa Maria (UFSM), 97105-900 Santa Maria, RS, Brazil
- E-mail: (M.A.P.M)
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