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Lee DG, Kim EJ, Kim YH, Cho WC, Cho Y, Han JY, Kim SJ, Park JH, Lee J, Kim E, Jung JY. Mutational analysis of 23 autosomal short tandem repeats based on trio paternity testing in the Korean population. Leg Med (Tokyo) 2024; 69:102447. [PMID: 38640874 DOI: 10.1016/j.legalmed.2024.102447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Revised: 03/11/2024] [Accepted: 04/15/2024] [Indexed: 04/21/2024]
Abstract
This study aimed to estimate A-STR mutation rates in 2,317 Korean parent-child trios by examining 20 Combined DNA Index System (CODIS) core loci (D3S1358, D5S818, D7S820, D8S1179, D13S317, D16S539, D18S51, D21S11, CSF1PO, FGA, TH01, TPOX, vWA, D1S1656, D2S441, D2S1338, D10S1248, D12S391, D19S433, and D22S1045) and three non-CODIS loci (Penta E, Penta D, and SE33). Locus-specific mutation rate estimates varied from 0.00 to 8.63 × 10-3 per generation, with an average mutation rate of 1.62 × 10-3 (95 % CI, 1.39-1.88 × 10-3). We also combined data from previous studies to obtain comprehensive genetic values for the Korean population, and the average mutation rate was 1.59 × 10-3 (95 % CI, 1.38-1.82 × 10-3). Single-step mutations (95.69 %) and double-step mutations (3.35 %) were observed in the mutation pattern analysis, and cases expected to have multi-step mutations (0.96 %) were also observed. Large-sized alleles exhibited more loss mutations than gain mutations, and paternal mutations (62.68 %) were more frequently observed than maternal mutations (19.62 %). The calculated values and features of the 23 A-STRs explored in this study are expected to play a crucial role in establishing criteria for forensic genetic interpretation.
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Affiliation(s)
- Dong Gyu Lee
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea; Department of Forensic Sciences, Sungkyunkwan University, 2066, Seobu-ro, Jangan-gu, Suwon-si, Gyeonggi-do 16419, Republic of Korea
| | - Eun Jin Kim
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea
| | - Yoo Hee Kim
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea
| | - Woo-Cheol Cho
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea
| | - Yoonjung Cho
- DNA Analysis Division, National Forensic Service Gwangju Institute, 60-15, Nanosandan 5-ro, Nam-myeon, Jangseong-gun, Gwangju 57248, Republic of Korea
| | - Ji Yeon Han
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea
| | - Su Jin Kim
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea
| | - Ji Hwan Park
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea
| | - Jinmyung Lee
- DNA Analysis Division, National Forensic Service Seoul Institute, 139, Jiyang-ro, Yangcheon-gu, Seoul 08036, Republic of Korea
| | - Eungsoo Kim
- Forensic DNA Division, National Forensic Service, 10, Ipchun-ro, Wonju-si, Gangwon-do 26460, Republic of Korea.
| | - Ju Yeon Jung
- Forensic DNA Section, National Forensic Service Jeju Branch, 221, Cheomdan-ro, Jeju-si, Jeju-do 63309, Republic of Korea; Department of Forensic Medicine, Seoul National University College of Medicine, 103, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea.
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2
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Huang Y, Liu C, Xiao C, Chen X, Han X, Yi S, Huang D. Mutation analysis of 28 autosomal short tandem repeats in the Chinese Han population. Mol Biol Rep 2021; 48:5363-5369. [PMID: 34213710 DOI: 10.1007/s11033-021-06522-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Accepted: 06/25/2021] [Indexed: 11/26/2022]
Abstract
Short tandem repeats (STRs) have been extensively used in forensic genetics. However, according to previous studies, the mutation rates of STRs are relatively high and are affected by many factors. Therefore, it is important to analyze STR mutations and determine the influence of underlying factors on STR mutation rates. Mutation rates of 28 autosomal STRs were determined from 8708 paternity testing cases in the Chinese Han population, and the relationships between STR mutation rates and population, sex, age, allele length and heterozygosity were investigated. A total of 279 mutations were observed at 27 loci in a total of 233,530 meiosis cases, including 273 (97.8%) one-step, 5 (1.8%) two-step and 1 (0.4%) three-step mutations. The overall average mutation rate was 1.19 × 10-3 (95% CI 1.06 × 10-3 - 1.34 × 10-3) ranging from 0 (TPOX) to 2.79 × 10-3 (D13S325). Mutation rate comparisons revealed statistically significant differences at several STRs among populations. Paternal mutations occurred more frequently than maternal mutations, at a ratio of 6.04:1, and the mutation rate tended to increase with paternal age. Moreover, our study revealed a bias towards contraction mutations for long alleles and expansion mutations for short alleles. No obvious bias was observed in the overall mutation direction. In addition, STR loci with higher expected heterozygosity (Hexp) tended to have higher mutation rates. This work revealed the relationships between STR mutation rates and several influencing factors, providing useful data and information for further research on STR mutations in forensic genetics.
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Affiliation(s)
- Yujie Huang
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Cong Liu
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Chao Xiao
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Xiaoying Chen
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Xueli Han
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Shaohua Yi
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Daixin Huang
- Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
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3
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Xu W, Wang Y, Zhang D, Wang D, Zhou L, Ye X, Zhu C, Shi Y. Mutation analysis of 21 autosomal short tandem repeats in Han population from Hunan, China. Ann Hum Biol 2020; 46:254-260. [PMID: 31264462 DOI: 10.1080/03014460.2019.1638966] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
Background: Short tandem repeats (STRs) are powerful genetic markers widely used in human genetics. Population data and locus-specific mutation rates of STRs are crucial for the evaluation and interpretation of genetic evidence in forensic and population genetics.Aim: To investigate the mutation rates of 21 autosomal STRs in a population from central south China.Subjects and methods: This study analysed 3420 paternity cases with a Combined Paternity Index >10,000 from Han population in Hunan. A total of 68,743 meiotic transfers were analysed and 62 mutations were identified.Results: The overall mutation rate of STR loci was 0.9 × 10-3 (95% CI, 0.0007-0.0011) and the locus-specific mutation rates were estimated ranging from 0.0000-0.0023. Locus D1S1656 exhibited the highest mutation rate of 2.3 × 10-3 (95% CI, 0.0005-0.0006), followed by D12S391 with a mutation rate of 2.0 × 10-3 (95% CI, 0.0007-0.0044). No mutation was observed at TPOX, D2S1338 or Penta D. One-step mutation cases accounted for 96.77% of total mutations and the ratio of paternal vs maternal mutations was ∼4.85:1. Inter-population comparisons of locus-specific mutation rates of several STRs revealed significant differences between Han in Hunan and Han in other regions of China. Conclusion: The data justified the use of geographical data in further genetic applications.
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Affiliation(s)
- Wei Xu
- Institute of Translational Medicine, Hunan Provincial People's Hospital, the First Affiliated Hospital of Hunan Normal University, Changsha, PR China
| | - Yuequn Wang
- Institute of Life Science, Hunan Normal University, Changsha, PR China
| | - Dandan Zhang
- School of Public Health, University of South China, Hengyang, PR China
| | - Daixin Wang
- Center of Forensic Science, Hunan Provincial People's Hospital, the First Affiliated Hospital of Hunan School of Physical Sciences, Changsha, PR China
| | - Liang Zhou
- School of Public Health, Changsha Normal University, Changsha, PR China
| | - Xiangli Ye
- School of Medicine, Hunan Normal University, Changsha, PR China
| | - Chaogeng Zhu
- Translational Medicine Laboratory of Pancreatic Diseases, Hunan Provincial People's Hospital, the First Affiliated Hospital of Hunan Normal University, Changsha, PR China
| | - Yongzhong Shi
- Institute of Translational Medicine, Hunan Provincial People's Hospital, the First Affiliated Hospital of Hunan Normal University, Changsha, PR China
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4
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Estimates of mutation rates from incompatibilities are misleading - guidelines for publication and retrieval of mutation data urgently needed. FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES 2019. [DOI: 10.1016/j.fsigss.2019.10.110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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5
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Hamester FIR, da Silva DS, Leboute APM, Motta CHA, Alho CS. Slippage mutation rates in 15 autosomal short tandem repeat loci for forensic purposes in a Southeastern Brazilian population. Electrophoresis 2019; 40:2873-2876. [PMID: 31442316 DOI: 10.1002/elps.201800491] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2018] [Revised: 07/24/2019] [Accepted: 08/13/2019] [Indexed: 11/06/2022]
Abstract
Well-defined estimates of mutation rates in highly polymorphic tetranucleotide STR loci are a prerequisite for human identification in genetics laboratory routines useful for civil and criminal investigations. Studying 15 autosomal STR loci of forensic interest (CSF1PO, D2S1338, D3S1358, D5S818, D7S820, D8S1179, D13S317, D16S539, D18S51, D19S433, D21S11, FGA, TH01, TPOX, and vWA), we detected 193 slippage mutations (189 one-step and four two-step mutations) in 148 875 parent-child allelic transfers from 5171 paternity cases with true biological relationship (15 096 individuals; 4754 trios and 417 duos; 9925 meiosis) from the state of São Paulo, a very representative population of Brazil. The overall mutation rate was 1.3 × 10-3 and the highest rates were observed at loci vWA (2.8 × 10-3 ), FGA and D18S51 (2.7 × 10-3 for both), while loci TH01 and TPOX did not present any mutations. The mean slippage mutation rate of paternal origin (1.8 × 10-3 ) was six times higher than that observed for maternal origin (0.3 × 10-3 ).
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Affiliation(s)
- Fernanda Irma Remus Hamester
- Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Laboratório de Genética Humana e Molecular - Genética Forense, Porto Alegre, RS, Brazil.,Instituto-Geral de Perícias do Estado do Rio Grande do Sul (IGP-RS), Divisão de Genética Forense, Porto Alegre, RS, Brazil
| | - Débora Santos da Silva
- Instituto de Medicina Social e Criminologia (IMESC), Núcleo de Perícias Laboratoriais, São Paulo, SP, Brazil
| | - Ana Paula Magalhães Leboute
- Instituto-Geral de Perícias do Estado do Rio Grande do Sul (IGP-RS), Divisão de Genética Forense, Porto Alegre, RS, Brazil
| | - Carlos Henrique Ares Motta
- Instituto de Medicina Social e Criminologia (IMESC), Núcleo de Perícias Laboratoriais, São Paulo, SP, Brazil
| | - Clarice Sampaio Alho
- Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Laboratório de Genética Humana e Molecular - Genética Forense, Porto Alegre, RS, Brazil
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6
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Zhang B, Li Z, Li K, Chen P, Chen F. Forensic parameters and mutation analysis of 23 short tandem repeat (PowerPlex® Fusion System) loci in Fujian Han Chinese population. Leg Med (Tokyo) 2019; 37:33-36. [PMID: 30612022 DOI: 10.1016/j.legalmed.2019.01.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 11/30/2018] [Accepted: 01/01/2019] [Indexed: 01/10/2023]
Abstract
Kinship testing based on genetic markers has valuable practical applications. Short tandem repeat polymorphisms (STRPs) can have large number of alleles, and become the dominant marker for kinship identification. However, the high mutation rates affect the identification accuracy. Thus, accurate investigation of the mutation rate of STR loci in different populations is crucial for the reliability of phylogenetic relationships. In present study, forensic parameters and mutation rates (include 95% CI) of 23 short tandem repeats (STR) loci (D3S1358, D1S1656, D2S441, D10S1248, D13S317, D16S539, D18S51, D2S1338, CSF1PO, TH01, vWA, D21S11, D7S820, D5S818, TPOX, D8S1179, D12S391, D19S433, FGA, D22S1045, PentaE, PentaD and DYS391) were investigated through PowerPlex® Fusion System in Fujian Han population. The high level of CDP (0.999999999999999999999999992) and CPE (0.999999993) indicated the panel was high efficiency in forensic DNA identification and paternity testing. In mutation analysis, 43 mutation cases were found through 54,124 parent-child meiotic transfers. The observed mutation rates ranged from 0 (D3S1358, D1S1656, D13S317, TH01, D19S433 and D22S1045) to 0.0025 (PentaE and FGA). The overall mutation rate across all loci was 0.0008 and the average mutation rate for the 23 loci was estimated to be 0.00078 per meiosis. The vast majority of mutations were single-step (88.4%) mutation and also include double-step (9.3%) and triple-step (2.3%) mutations. Paternal mutation rate was more common than maternal mutation rate with a ratio of 7.2:1. In addition, mutation rates indicated positive correlation (r = 0.633, p = 0.009) with the expected heterozygosity (He).
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Affiliation(s)
- Beilei Zhang
- Fujian Zhengtai Judicial Expertise Center, Xiamen, Fujian 361000, PR China
| | - Zheng Li
- Department of Forensic Medicine, Nanjing Medical University, Nanjing, Jiangsu 211166, PR China
| | - Kai Li
- Department of Forensic Medicine, Nanjing Medical University, Nanjing, Jiangsu 211166, PR China
| | - Peng Chen
- Department of Forensic Medicine, Nanjing Medical University, Nanjing, Jiangsu 211166, PR China.
| | - Feng Chen
- Department of Forensic Medicine, Nanjing Medical University, Nanjing, Jiangsu 211166, PR China; Key Laboratory of Targeted Intervention of Cardiovascular Disease, Collaborative Innovation Center for Cardiovascular Disease Translational Medicine, Nanjing Medical University, Nanjing, Jiangsu 211166, PR China.
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7
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Qu N, Zhang X, Liang H, Ou X. Analysis of genetic polymorphisms and mutations at 23 autosomal STR loci in Guangdong Han population. Forensic Sci Int Genet 2019; 38:e16-e17. [DOI: 10.1016/j.fsigen.2018.11.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2018] [Revised: 11/01/2018] [Accepted: 11/02/2018] [Indexed: 10/27/2022]
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8
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Mutability analysis towards 21 STR loci included in the AGCU 21 + 1 kit in Chinese Han population. Int J Legal Med 2018; 132:1287-1291. [DOI: 10.1007/s00414-018-1873-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Accepted: 05/28/2018] [Indexed: 01/12/2023]
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9
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Mutation analysis of 19 commonly used short tandem repeat loci in a Guangdong Han population. Leg Med (Tokyo) 2018; 32:92-97. [DOI: 10.1016/j.legalmed.2018.03.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Revised: 02/08/2018] [Accepted: 03/22/2018] [Indexed: 11/23/2022]
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10
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Droździok K, Kabiesz J, Tomsia M, Skowronek R, Rębała K. Mutation analysis of short tandem repeats in a population sample from Upper Silesia (southern Poland). Leg Med (Tokyo) 2018; 33:1-4. [PMID: 29677481 DOI: 10.1016/j.legalmed.2018.03.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2017] [Revised: 12/03/2017] [Accepted: 03/31/2018] [Indexed: 10/17/2022]
Abstract
In paternity testing, DNA polymorphism analysis not only settles explicitly disputed paternity issue but also provides information on mutation frequencies in STR loci. In this study, insertion or deletion of one repetitive unit was observed in 38 of 32,391 meiotic transfers analysed in 953 paternity testing cases. Parentage samples from Upper Silesia (southern Poland) were examined in 2008-2014 with the use of three commercially available amplification kits: AmpFlSTR Identifiler (Applied Biosystems), PowerPlex 16 HS (Promega) and PowerPlex ESX 17 (Promega). The rate of paternal mutations was 4.6 times higher than that of maternal ones. The highest mutation rate was noted at VWA locus. Interpopulation comparisons showed statistically significant differences in mutation rates of several STRs between Upper Silesia and populations from Brazil and China. There were no differences in occurrence of mutations between a population from Upper Silesia and another southern Polish population from a region of Lesser Poland. Our results suggest that knowledge of STR mutation rates in different populations may be important for calculations of probability of relationship in disputed paternity testing and that such calculations should be based on population-specific mutation rates, at least for some STR markers used commonly in forensic genetics.
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Affiliation(s)
- Kornelia Droździok
- Department of Forensic Medicine and Forensic Toxicology, School of Medicine in Katowice, Medical University of Silesia in Katowice, Katowice, Poland.
| | - Jadwiga Kabiesz
- Department of Forensic Medicine and Forensic Toxicology, School of Medicine in Katowice, Medical University of Silesia in Katowice, Katowice, Poland
| | - Marcin Tomsia
- Department of Forensic Medicine and Forensic Toxicology, School of Medicine in Katowice, Medical University of Silesia in Katowice, Katowice, Poland
| | - Rafał Skowronek
- Department of Forensic Medicine and Forensic Toxicology, School of Medicine in Katowice, Medical University of Silesia in Katowice, Katowice, Poland
| | - Krzysztof Rębała
- Department of Forensic Medicine, Medical University of Gdansk, Gdansk, Poland
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11
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The genetic diversity and applicability assessment of autosomal STRs among Chinese populations by a novel Fixation Index and Nei’s index. Leg Med (Tokyo) 2018; 31:49-58. [DOI: 10.1016/j.legalmed.2017.12.012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Revised: 12/04/2017] [Accepted: 12/27/2017] [Indexed: 11/18/2022]
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12
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Li H, Zhao X, Ma K, Cao Y, Zhou H, Ping Y, Shao C, Xie J, Liu W. Applying massively parallel sequencing to paternity testing on the Ion Torrent Personal Genome Machine. Forensic Sci Int Genet 2017; 31:155-159. [PMID: 28946114 DOI: 10.1016/j.fsigen.2017.09.007] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Revised: 09/06/2017] [Accepted: 09/11/2017] [Indexed: 11/30/2022]
Abstract
Massively parallel sequencing (MPS) is a promising supplementary method for forensic genetics and has gradually been applied to forensic casework. In this study, we applied MPS to forensic casework on an Ion Torrent Personal Genome Machine to evaluate its performance in paternity testing with mismatched STR loci. A total of 15 samples from seven cases containing one mismatched locus by capillary electrophoresis typing were analyzed. Combined paternity index (CPI) and relative chance of paternity were calculated according to the International Society for Forensic Genetics guidelines and the Chinese national standards recommended for paternity testing. With simultaneous analysis of enough STR loci, the results support the certainty of paternity, and the mismatched alleles were considered to be mutations (CPI>10,000). With the detection of allele sequence structures, the origins of the mutations were inferred in some cases. Meanwhile, nine STRs (CSF1PO, D1S1656, D2S441, D2S1338, D3S1358, D8S1179, D12S391, D21S11 and D4S2408) were found in an increased number of unique alleles and three new alleles in three STRs (D2S441, D21S11, and FGA) that have not been reported before were detected. Therefore, MPS can provide valuable information for forensic genetics research and play a promising role in paternity testing.
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Affiliation(s)
- Hui Li
- Shanghai Key Laboratory of Crime Scene Evidence, Shanghai Research Institute of Criminal Science and Technology, Shanghai 200083, China.
| | - Xueying Zhao
- Shanghai Key Laboratory of Crime Scene Evidence, Shanghai Research Institute of Criminal Science and Technology, Shanghai 200083, China
| | - Ke Ma
- Shanghai Key Laboratory of Crime Scene Evidence, Shanghai Research Institute of Criminal Science and Technology, Shanghai 200083, China
| | - Yu Cao
- Key Laboratory of Forensic Evidence and Science Technology, Ministry of Public Security, Institute of Forensic Science, Shanghai Public Security Bureau, Shanghai 200083, China
| | - Huaigu Zhou
- Key Laboratory of Forensic Evidence and Science Technology, Ministry of Public Security, Institute of Forensic Science, Shanghai Public Security Bureau, Shanghai 200083, China
| | - Yuan Ping
- Key Laboratory of Forensic Evidence and Science Technology, Ministry of Public Security, Institute of Forensic Science, Shanghai Public Security Bureau, Shanghai 200083, China
| | - Chengchen Shao
- Department of Forensic Medicine, Shanghai Medical College of Fudan University, Shanghai 200032, China
| | - Jianhui Xie
- Department of Forensic Medicine, Shanghai Medical College of Fudan University, Shanghai 200032, China
| | - Wenbin Liu
- Shanghai Key Laboratory of Crime Scene Evidence, Shanghai Research Institute of Criminal Science and Technology, Shanghai 200083, China.
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13
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Vieira TC, Duarte Gigonzac MA, Goulart Rodovalho R, Morais Cavalcanti L, Bernardes Minasi L, Melo Rodrigues F, da Cruz AD. Mutation rates in 21 autosomal short tandem repeat loci in a population from Goiás, Brazil. Electrophoresis 2017; 38:2791-2794. [DOI: 10.1002/elps.201700192] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2017] [Revised: 06/20/2017] [Accepted: 07/29/2017] [Indexed: 11/07/2022]
Affiliation(s)
- Thaís Cidália Vieira
- LaGene-Laboratory of Human Cytogenetics and Molecular Genetics; Secretary of State for Health of Goiás (LACEN/SESGO); Goiânia GO Brazil
- State University of Goiás (UEG); Goiânia GO Brazil
- Postgraduate Program in Genetics (MGene)/Replicon Research Center; Pontifical Catholic University of Goiás (PUC-GO); Goiânia GO Brazil
| | - Marc Alexandre Duarte Gigonzac
- LaGene-Laboratory of Human Cytogenetics and Molecular Genetics; Secretary of State for Health of Goiás (LACEN/SESGO); Goiânia GO Brazil
- State University of Goiás (UEG); Goiânia GO Brazil
- Postgraduate Program in Genetics (MGene)/Replicon Research Center; Pontifical Catholic University of Goiás (PUC-GO); Goiânia GO Brazil
| | | | | | - Lysa Bernardes Minasi
- Postgraduate Program in Genetics (MGene)/Replicon Research Center; Pontifical Catholic University of Goiás (PUC-GO); Goiânia GO Brazil
| | - Flávia Melo Rodrigues
- State University of Goiás (UEG); Goiânia GO Brazil
- Postgraduate Program in Genetics (MGene)/Replicon Research Center; Pontifical Catholic University of Goiás (PUC-GO); Goiânia GO Brazil
| | - Aparecido Divino da Cruz
- LaGene-Laboratory of Human Cytogenetics and Molecular Genetics; Secretary of State for Health of Goiás (LACEN/SESGO); Goiânia GO Brazil
- Postgraduate Program in Genetics (MGene)/Replicon Research Center; Pontifical Catholic University of Goiás (PUC-GO); Goiânia GO Brazil
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14
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Sun L, Shi K, Tan L, Zhang Q, Fu L, Zhang X, Fu G, Li S, Cong B. Analysis of genetic polymorphisms and mutations at 19 STR loci in Hebei Han population. Forensic Sci Int Genet 2017; 31:e50-e51. [PMID: 28818430 DOI: 10.1016/j.fsigen.2017.07.016] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Revised: 07/22/2017] [Accepted: 07/31/2017] [Indexed: 01/06/2023]
Affiliation(s)
- Lijuan Sun
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Ke Shi
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Lu Tan
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Qian Zhang
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Lihong Fu
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Xiaojing Zhang
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Guangping Fu
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China
| | - Shujin Li
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China.
| | - Bin Cong
- Department of Forensic Medicine, Hebei Medical University, Hebei Key Laboratory of Forensic Medicine, No.361 Zhongshan East Road, Shijiazhuang, Hebei 050017, PR China.
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15
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Su Q, Jin B, Luo H, Li Y, Wu J, Yan J, Hou Y, Liang W, Zhang L. Population study and mutation analysis for 28 short tandem repeat loci in southwest Chinese Han population. J Forensic Leg Med 2016; 44:10-13. [DOI: 10.1016/j.jflm.2016.08.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2015] [Revised: 08/08/2016] [Accepted: 08/23/2016] [Indexed: 11/30/2022]
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16
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Shao C, Lin M, Zhou Z, Zhou Y, Shen Y, Xue A, Zhou H, Tang Q, Xie J. Mutation analysis of 19 autosomal short tandem repeats in Chinese Han population from Shanghai. Int J Legal Med 2016; 130:1439-1444. [DOI: 10.1007/s00414-016-1427-z] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Accepted: 07/19/2016] [Indexed: 10/21/2022]
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17
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Jin B, Su Q, Luo H, Li Y, Wu J, Yan J, Hou Y, Liang W, Zhang L. Mutational analysis of 33 autosomal short tandem repeat (STR) loci in southwest Chinese Han population based on trio parentage testing. Forensic Sci Int Genet 2016; 23:86-90. [DOI: 10.1016/j.fsigen.2016.03.009] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2016] [Revised: 02/17/2016] [Accepted: 03/28/2016] [Indexed: 11/27/2022]
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18
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Evaluation of the genetic parameters and mutation analysis of 22 STR loci in the central Chinese Han population. Int J Legal Med 2016; 131:103-105. [PMID: 27225389 DOI: 10.1007/s00414-016-1389-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Accepted: 05/13/2016] [Indexed: 01/10/2023]
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19
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Mutation Study of 28 Autosomal STR Loci in Southwest Chinese Han Population. FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES 2015. [DOI: 10.1016/j.fsigss.2015.09.118] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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