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Xue L, Cai JH, Zhan M, Li XP, Wu L, Chen YP. Molecular and morphological evidence for a new species of Stachys (Lamiaceae) from Hunan, China. PHYTOKEYS 2023; 236:121-134. [PMID: 38312773 PMCID: PMC10838187 DOI: 10.3897/phytokeys.236.112741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2023] [Accepted: 11/26/2023] [Indexed: 02/06/2024]
Abstract
Stachysyingzuijieensis, a new species from western Hunan, China, is described and illustrated. Molecular phylogenetic analyses based on three nuclear ribosomal DNA loci (ETS, ITS and 5S-NTS) recovered S.yingzuijieensis within the Stachys clade and as a sister group of S.arrecta. The two species can be easily distinguished by the morphology of lamina, corolla and nutlet. A key to all species of Stachydeae from China is also provided.
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Affiliation(s)
- Ling Xue
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China Central South University of Forestry and Technology Changsha China
| | - Jia-Hua Cai
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China Central South University of Forestry and Technology Changsha China
| | - Min Zhan
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China Central South University of Forestry and Technology Changsha China
| | - Xiao-Ping Li
- Yingzuijie National Nature Reserve of Hunan Province, Huaihua 563517, China Yingzuijie National Nature Reserve of Hunan Province Huaihua China
| | - Lei Wu
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China Central South University of Forestry and Technology Changsha China
| | - Ya-Ping Chen
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China Kunming Institute of Botany, Chinese Academy of Sciences Kunming China
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Jabeen S, Zafar M, Ahmad M, Althobaiti AT, Ozdemir FA, Kutlu MA, Makhkamov TK, Sultana S, Ameen M, Majeed S. Ultra-sculpturing of seed morphotypes in selected species of genus Salvia L. and their taxonomic significance. PLANT BIOLOGY (STUTTGART, GERMANY) 2023; 25:96-106. [PMID: 36181702 DOI: 10.1111/plb.13473] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 08/15/2022] [Indexed: 06/16/2023]
Abstract
The taxonomic importance of macromorphological and micromorphological seed characteristics was investigated using SEM of ten species of the Salvia genus from Pakistan. The aim was to identify diagnostic seed ultrastructural features that could aid in species delimitation, correct identification and phylogenetic position. The ultrastructure of Salvia varies greatly, and a wide range of unique micromorphological features have been observed. Seed micromorphological features were explored by SEM, including seed shape, colour, texture, cell outline, surface sculpturing, epidermal cell arrangement, anticlinal, and periclinal wall pattern. Seed shapes were categorized as obovate, spherical, spheroid, broadly elliptic, elliptic and oblong, mostly with a terminal hilum. Seed colours were black, light brown, dark brown, brown and yellow. Exo-morphological characters, i.e. epidermal cell arrangements, included irregular, wavy pentagonal-hexagonal, regular pentagonal-hexagonal. Cluster analysis was used to assess similar and distinct species within Salvia with a feasible explanation. Taxonomic keys were made based on micromorphological qualitative features that help to delimit species and identify them quickly within the Salvia genus. Seed morphology of ten Salvia species was described and investigated, and the diagnostic significance of features evaluated using SEM. This study analysed seed features, especially at the species level, which might provide much new taxonomic information. The results revealed that, in seed morphology, using SEM can help with taxon identification, especially at the genus and species levels.
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Affiliation(s)
- S Jabeen
- Department of Plant Systematics and Biodiversity Lab Quaid-i-Azam University, Islamabad, Pakistan
| | - M Zafar
- Department of Plant Systematics and Biodiversity Lab Quaid-i-Azam University, Islamabad, Pakistan
| | - M Ahmad
- Department of Plant Systematics and Biodiversity Lab Quaid-i-Azam University, Islamabad, Pakistan
- Pakistan Academy of Sciences, Islamabad, Pakistan
| | - A T Althobaiti
- Department of Biology, College of Science, Taif University, Taif, Saudi Arabia
| | - F A Ozdemir
- Bingöl University Faculty of Science and Literature - Department of Molecular Biology and Genetics, Bingol, Turkey
| | - M A Kutlu
- Beekeeping Research Development Applications Centre Offices, Bingol University, Bingol, Turkey
| | - T K Makhkamov
- Department of forestry and landscape design, Tashkent State Agrarian University, Tashkent Region, Uzbekistan
| | - S Sultana
- Department of Plant Systematics and Biodiversity Lab Quaid-i-Azam University, Islamabad, Pakistan
| | - M Ameen
- Department of Plant Systematics and Biodiversity Lab Quaid-i-Azam University, Islamabad, Pakistan
| | - S Majeed
- Department of Plant Systematics and Biodiversity Lab Quaid-i-Azam University, Islamabad, Pakistan
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Zhao F, Wu YW, Drew BT, Yao G, Chen YP, Cai J, Liu ED, Li B, Xiang CL. Systematic Placement of the Enigmatic Southeast Asian Genus Paralamium and an Updated Phylogeny of Tribe Pogostemoneae (Lamiaceae Subfamily Lamioideae). FRONTIERS IN PLANT SCIENCE 2021; 12:646133. [PMID: 33936133 PMCID: PMC8085563 DOI: 10.3389/fpls.2021.646133] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/25/2020] [Accepted: 03/22/2021] [Indexed: 06/12/2023]
Abstract
Paralamium (Lamiaceae) is a monotypic genus within the subfamily Lamioideae and has a sporadic distribution in subtropical mountains of southeast Asia. Although recent studies have greatly improved our understanding of generic relationships within Lamioideae, the second most species-rich subfamily of Lamiaceae, the systematic position of Paralamium within the subfamily remains unclear. In this study, we investigate the phylogenetic placement of the genus using three datasets: (1) a 69,276 bp plastome alignment of Lamiaceae; (2) a five chloroplast DNA region dataset of tribe Pogostemoneae, and (3) a nuclear ribosomal internal transcribed spacer region dataset of Pogostemoneae. These analyses demonstrate that Paralamium is a member of Pogostemoneae and sister to the monotypic genus Craniotome. In addition, generic-level phylogenetic relationships within Pogostemoneae are also discussed, and a dichotomous key for genera within Pogostemoneae is provided.
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Affiliation(s)
- Fei Zhao
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Yi-Wen Wu
- College of Life Sciences, Shaanxi Normal University, Xi’an, China
| | - Bryan T. Drew
- Department of Biology, University of Nebraska at Kearney, Kearney, NE, United States
| | - Gang Yao
- South China Limestone Plants Center, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou, China
| | - Ya-Ping Chen
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Jie Cai
- Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - En-De Liu
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Bo Li
- Research Centre of Ecological Sciences, College of Agronomy, Jiangxi Agricultural University, Nanchang, China
| | - Chun-Lei Xiang
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
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Zhao F, Chen YP, Salmaki Y, Drew BT, Wilson TC, Scheen AC, Celep F, Bräuchler C, Bendiksby M, Wang Q, Min DZ, Peng H, Olmstead RG, Li B, Xiang CL. An updated tribal classification of Lamiaceae based on plastome phylogenomics. BMC Biol 2021; 19:2. [PMID: 33419433 PMCID: PMC7796571 DOI: 10.1186/s12915-020-00931-z] [Citation(s) in RCA: 88] [Impact Index Per Article: 29.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Accepted: 11/19/2020] [Indexed: 11/17/2022] Open
Abstract
BACKGROUND A robust molecular phylogeny is fundamental for developing a stable classification and providing a solid framework to understand patterns of diversification, historical biogeography, and character evolution. As the sixth largest angiosperm family, Lamiaceae, or the mint family, consitutes a major source of aromatic oil, wood, ornamentals, and culinary and medicinal herbs, making it an exceptionally important group ecologically, ethnobotanically, and floristically. The lack of a reliable phylogenetic framework for this family has thus far hindered broad-scale biogeographic studies and our comprehension of diversification. Although significant progress has been made towards clarifying Lamiaceae relationships during the past three decades, the resolution of a phylogenetic backbone at the tribal level has remained one of the greatest challenges due to limited availability of genetic data. RESULTS We performed phylogenetic analyses of Lamiaceae to infer relationships at the tribal level using 79 protein-coding plastid genes from 175 accessions representing 170 taxa, 79 genera, and all 12 subfamilies. Both maximum likelihood and Bayesian analyses yielded a more robust phylogenetic hypothesis relative to previous studies and supported the monophyly of all 12 subfamilies, and a classification for 22 tribes, three of which are newly recognized in this study. As a consequence, we propose an updated phylogenetically informed tribal classification for Lamiaceae that is supplemented with a detailed summary of taxonomic history, generic and species diversity, morphology, synapomorphies, and distribution for each subfamily and tribe. CONCLUSIONS Increased taxon sampling conjoined with phylogenetic analyses based on plastome sequences has provided robust support at both deep and shallow nodes and offers new insights into the phylogenetic relationships among tribes and subfamilies of Lamiaceae. This robust phylogenetic backbone of Lamiaceae will serve as a framework for future studies on mint classification, biogeography, character evolution, and diversification.
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Affiliation(s)
- Fei Zhao
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Ya-Ping Chen
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Yasaman Salmaki
- Center of Excellence in Phylogeny of Living Organisms, Department of Plant Science, College of Science, University of Tehran, P.O. Box 14155-6455, Tehran, Iran
| | - Bryan T Drew
- Department of Biology, University of Nebraska at Kearney, Kearney, NE, 68849, USA
| | - Trevor C Wilson
- National Herbarium of New South Wales, Australian Institute of Botanical Science, Royal Botanic Gardens & Domain Trust, Sydney, Australia
| | | | - Ferhat Celep
- Department of Biology, Faculty of Arts and Sciences, Kırıkkale University, Kırıkkale, Turkey
- Department of Botany, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Christian Bräuchler
- Department of Botany, Natural History Museum Vienna, Burgring 7, 1010, Wien, Austria
| | - Mika Bendiksby
- NTNU University Museum, Norwegian University of Science and Technology, 7491, Trondheim, Norway
- Natural History Museum, University of Oslo, Oslo, Norway
| | - Qiang Wang
- State Key Laboratory of Systematic & Evolutionary Botany, Institute of Botany, Chinense Academy of Sciences, Xiangshan, Beijing, 100093, China
| | - Dao-Zhang Min
- Research Centre of Ecological Sciences, College of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Hua Peng
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | | | - Bo Li
- Research Centre of Ecological Sciences, College of Agronomy, Jiangxi Agricultural University, Nanchang, 330045, China.
| | - Chun-Lei Xiang
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.
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Cucho H, López Y, Caldeira C, Valverde A, Ordóñez C, Soler C. Comparison of three different staining methods for the morphometric characterization of Alpaca (Vicugna pacos) sperm, using ISAS® CASA-Morph system. NOVA BIOLOGICA REPERTA 2019. [DOI: 10.29252/nbr.6.3.284] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Kharazian N, Rahimi S, Shiran B. Genetic diversity and morphological variability of fifteen Stachys (Lamiaceae) species from Iran using morphological and ISSR molecular markers. Biologia (Bratisl) 2015. [DOI: 10.1515/biolog-2015-0051] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Salmaki Y, Zarre S, Ryding O, Lindqvist C, Bräuchler C, Heubl G, Barber J, Bendiksby M. Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae). Mol Phylogenet Evol 2013; 69:535-51. [PMID: 23916621 DOI: 10.1016/j.ympev.2013.07.024] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2013] [Revised: 07/20/2013] [Accepted: 07/23/2013] [Indexed: 11/26/2022]
Abstract
Although tribe Stachydeae (Lamiaceae) is considered monophyletic, relationships within the tribe are still poorly understood. The complexity of Stachydeae includes paraphyletic genera, considerable morphological plasticity, a range of ploidy levels, and presumably frequent natural hybridization. We performed parsimony and Bayesian phylogenetic analyses of nuclear (ribosomal ITS) and plastid (trnL intron, trnL-trnF spacer, rps16 intron) DNA sequence data from a taxonomically and geographically broad sampling of the tribe to identify major evolutionary lineages and to test taxonomic hypotheses within this largest of all lamioid tribes. We included 143 accessions corresponding to 121 species, representing both Old and New World species, and all 12 recognized genera of tribe Stachydeae. Both nuclear and plastid data corroborate monophyly of the tribe, with Melittis as sister to all remaining Stachydeae. For the latter well-supported clade, we suggest the phylogenetic name Eurystachys. Within Eurystachys, although monophyly is supported by both nuclear and plastid data for several named and unnamed groups, the majority of recognized taxa appear to be para- or polyphyletic. The taxon compositions of most subclades are congruent between the plastid and nuclear tree topologies, whereas their relative phylogenetic placements are often not. This level of plastid-nuclear incongruence suggests considerable impact of hybridization in the evolution of Stachydeae.
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Affiliation(s)
- Yasaman Salmaki
- Center of Excellence in Phylogeny of Living Organisms, Department of Plant Science, College of Science, University of Tehran, PO Box 14155-6455, Tehran, Iran; Biodiversity Research - Systematic Botany, Department of Biology I, Ludwig-Maximilians Universität München, Menzinger Str. 67, D-80638 München, Germany.
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Circumscription of taxa in the chasmophilous Iranian Stachys species (Lamiaceae: sect. Fragilicaulis, subsect. Fragiles) inferred from isoenzyme variation patterns. BIOCHEM SYST ECOL 2008. [DOI: 10.1016/j.bse.2008.11.012] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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