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Matsushima Y, Ogawa Y, Nishi K, Nakata K. Concise synthesis of amino acid component of amicoumacins via dihydrooxazine formation through intramolecular conjugate addition. Biosci Biotechnol Biochem 2023; 87:131-137. [PMID: 36416802 DOI: 10.1093/bbb/zbac182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Accepted: 11/02/2022] [Indexed: 11/24/2022]
Abstract
Amicoumacins are a family of antibiotics with a variety of important bioactivities. A concise and efficient method was developed for synthesizing the amino acid component of amicoumacins via the corresponding dihydrooxazine intermediate. The dihydrooxazine ring was formed with complete stereoselectivity through an intramolecular conjugate addition of a δ-trichloroacetimidoyloxy-α,β-unsaturated ester, which was obtained from a known 4,6-O-p-methoxybenzylidene-protected d-glucose. The synthesis developed in this study can be used to synthesize the building blocks of amicoumacins and can likely be adapted for the synthesis of other types of molecules possessing dihydrooxazine rings or amino alcohol moieties.
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Affiliation(s)
- Yoshitaka Matsushima
- Department of Agricultural Chemistry, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo, Japan
| | - Yukako Ogawa
- Department of Agricultural Chemistry, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo, Japan
| | - Katsuya Nishi
- Department of Agricultural Chemistry, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo, Japan
| | - Kyosuke Nakata
- Department of Agricultural Chemistry, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo, Japan
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Shablykina OV, Shilin SV, Moskvina VS, Ishchenko VV, Khilya VP. Progress in the Chemistry of Amino-Acid Derivatives of Isocoumarins and 3,4-Dihydroisocoumarins. Chem Nat Compd 2021. [DOI: 10.1007/s10600-021-03323-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Wu G, Wang T, Jiang Z, Liu S, Sun C. Asymmetric Total Synthesis of Hetiamacins A-F. ACS OMEGA 2021; 6:8239-8245. [PMID: 33817482 PMCID: PMC8015134 DOI: 10.1021/acsomega.0c06267] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Accepted: 03/08/2021] [Indexed: 06/12/2023]
Abstract
Herein, we report a concise and stereoselective approach for the asymmetric total synthesis of hetiamacins A-F on the basis of the total synthesis of amicoumacin C, which could be synthesized from a known l-aspartic acid derivative. The synthesis of hetiamacin A was accomplished by an 11-step sequence that featured 1,3-oxazinane ring formation of amicoumacin B followed by amidation in one pot. Hetiamacins B-F were synthesized from amicoumacin A in only one step.
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Tsukaguchi S, Enomoto M, Towada R, Ogura Y, Kuwahara S. Unified Total Synthesis of Hetiamacins A-D. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901114] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Shogo Tsukaguchi
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba Aoba-ku, Sendai 980-0845 Japan
| | - Masaru Enomoto
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba Aoba-ku, Sendai 980-0845 Japan
| | - Ryo Towada
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba Aoba-ku, Sendai 980-0845 Japan
| | - Yusuke Ogura
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba Aoba-ku, Sendai 980-0845 Japan
| | - Shigefumi Kuwahara
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba Aoba-ku, Sendai 980-0845 Japan
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Kaspar F, Neubauer P, Gimpel M. Bioactive Secondary Metabolites from Bacillus subtilis: A Comprehensive Review. JOURNAL OF NATURAL PRODUCTS 2019; 82:2038-2053. [PMID: 31287310 DOI: 10.1021/acs.jnatprod.9b00110] [Citation(s) in RCA: 116] [Impact Index Per Article: 23.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Bacillus subtilis is widely underappreciated for its inherent biosynthetic potential. This report comprehensively summarizes the known bioactive secondary metabolites from B. subtilis and highlights potential applications as plant pathogen control agents, drugs, and biosurfactants. B. subtilis is well known for the production of cyclic lipopeptides exhibiting strong surfactant and antimicrobial activities, such as surfactins, iturins, and fengycins. Several polyketide-derived macrolides as well as nonribosomal peptides, dihydroisocoumarins, and linear lipopeptides with antimicrobial properties have been reported, demonstrating the biosynthetic arsenal of this bacterium. Promising efforts toward the application of B. subtilis strains and their natural products in areas of agriculture and medicine are underway. However, industrial-scale availability of these compounds is currently limited by low fermentation yields and challenging accessibility via synthesis, necessitating the development of genetically engineered strains and optimized cultivation processes. We hope that this review will attract renewed interest in this often-overlooked bacterium and its impressive biosynthetic skill set.
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Affiliation(s)
- Felix Kaspar
- Institute of Biotechnology , Technical University of Berlin , Ackerstraße 76 , 13355 Berlin , Germany
| | - Peter Neubauer
- Institute of Biotechnology , Technical University of Berlin , Ackerstraße 76 , 13355 Berlin , Germany
| | - Matthias Gimpel
- Institute of Biotechnology , Technical University of Berlin , Ackerstraße 76 , 13355 Berlin , Germany
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Suzuki T, Nagasawa T, Enomoto M, Kuwahara S. Stereoselective total synthesis of amicoumacin C. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.02.014] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Walther A, Josien-Lefebvre D, Le Drian C. New very mild conditions for the opening of an epoxide assisted by a neighboring carbonyl group. Tetrahedron Lett 2011. [DOI: 10.1016/j.tetlet.2011.03.024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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9
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Enomoto M, Kuwahara S. Synthetic Studies on Bacilosarcins A and B, and Related Natural Products. J SYN ORG CHEM JPN 2010. [DOI: 10.5059/yukigoseikyokaishi.68.387] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Martel F, Estrine B, Plantier-Royon R, Hoffmann N, Portella C. Development of Agriculture Left-Overs: Fine Organic Chemicals from Wheat Hemicellulose-Derived Pentoses. Top Curr Chem (Cham) 2010; 294:79-115. [DOI: 10.1007/128_2010_54] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Affiliation(s)
- Masaru Enomoto
- Laboratory of Applied Bioorganic Chemistry, Graduate School of Agricultural Science, Tohoku University, Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai 981-8555, Japan
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Affiliation(s)
- Fabienne Emery
- a Section de chimie de l'Université de Lausanne , 2, rue de la Barre, CH 1005, Lausanne, Switzerland
| | - Pierre Vogel
- a Section de chimie de l'Université de Lausanne , 2, rue de la Barre, CH 1005, Lausanne, Switzerland
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Kotsuki H, Araki T, Miyazaki A, Iwasaki M, Datta PK. A New Enantioselective Total Synthesis of AI-77-B. Org Lett 1999. [DOI: 10.1021/ol990102y] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hiyoshizo Kotsuki
- Department of Material Science, Faculty of Science, Kochi University, Akebono-cho, Kochi 780-8520, Japan
| | - Tomohiro Araki
- Department of Material Science, Faculty of Science, Kochi University, Akebono-cho, Kochi 780-8520, Japan
| | - Aya Miyazaki
- Department of Material Science, Faculty of Science, Kochi University, Akebono-cho, Kochi 780-8520, Japan
| | - Mitsuhiro Iwasaki
- Department of Material Science, Faculty of Science, Kochi University, Akebono-cho, Kochi 780-8520, Japan
| | - Probal K. Datta
- Department of Material Science, Faculty of Science, Kochi University, Akebono-cho, Kochi 780-8520, Japan
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Ghosh AK, Cappiello J. Stereoselective Synthesis of Dihydroisocoumarin Moiety of Microbial Agent AI-77-B: a Diels-Alder Based Strategy. Tetrahedron Lett 1998; 39:8803-8806. [PMID: 30422131 DOI: 10.1016/s0040-4039(98)01977-7] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The dihydroisocoumarin fragment of the gastroprotective natural product AI-77-B has been synthesized in optically active form by using a regiospecific Diels-Alder reaction of 1-methoxy-1,3-cyclohexadiene and an acetylenic ester derivative, prepared stereoselectively from leucinal.
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Affiliation(s)
- Arun K Ghosh
- Department of Chemistry, University of Illinois at Chicago, 845 West Taylor Street, Chicago, Illinois 60607
| | - John Cappiello
- Department of Chemistry, University of Illinois at Chicago, 845 West Taylor Street, Chicago, Illinois 60607
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A. Ward R, Procter G. A Total Synthesis of the Natural Enantiomer of the Gastroprotective Natural Products AI-77-B and Amicoumacin C Hydrochloride. Tetrahedron 1995. [DOI: 10.1016/0040-4020(95)00776-5] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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18
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Bialecki M, Vogel P. Stereoselective Synthesis of 2,4,6-Trimethylcyclohex-4-ene-1,3-diol Derivatives and of polypropionate fragments with four contiguous stereogenic centers. Helv Chim Acta 1995. [DOI: 10.1002/hlca.19950780206] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Meerpoel L, Vrahami MM, Deguin B, Vogel P. Face selectivity of theDiels-Alder additions and cheletropic additions of sulfur dioxide to 2- vinyl-7-oxabicyclo[2.2.1]hept-2-ene derivatives. Helv Chim Acta 1994. [DOI: 10.1002/hlca.19940770326] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Hünenberger P, Allemann S, Vogel P. Total asymmetric synthesis of 3-amino-3-deoxy-l-talose and derivatives. Carbohydr Res 1994. [DOI: 10.1016/0008-6215(94)80034-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Allemann S, Vogel P. Enantioselective synthesis of (?)-conduramine C1 and aminobromocyclitol derivatives. Helv Chim Acta 1994. [DOI: 10.1002/hlca.19940770103] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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22
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Allemann S, Vogel P. Unexpected selectivity between pinacolic rearrangement and intramolecular displacement in the acid-promoted epoxide ring opening of 6-exo-cyano-3,8-dioxabicyclo[3.2.1.02,4]oct-6-endo-yl esters. Tetrahedron 1994. [DOI: 10.1016/s0040-4020(01)86963-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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