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Saber S, Al-Qawasmeh RA, Abu-Qatouseh L, Shtaiwi A, Khanfar MA, Al-Soud YA. Novel hybrid motifs of 4-nitroimidazole-piperazinyl tagged 1,2,3-triazoles: Synthesis, crystal structure, anticancer evaluations, and molecular docking study. Heliyon 2023; 9:e19327. [PMID: 37681149 PMCID: PMC10480608 DOI: 10.1016/j.heliyon.2023.e19327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 08/08/2023] [Accepted: 08/18/2023] [Indexed: 09/09/2023] Open
Abstract
4-((4-(1-benzyl-2-methyl-4-nitro-1H-imidazole-5-yl)piperazine-1-yl)methyl)-1-substituted-1H-1,2,3-triazole motifs are designed and synthesized via click chemistry. The reaction of 1-(N1-benzyl- 2-methyl-4-nitro-1H-imidazole- 5-yl)-4-(prop-2-yn-1-yl) piperazine 5 as new scaffold with diverse primary azides to selectively produce 1,4-disubstituted-1,2,3-triazoles 9a-k, 10a-c and 11a-q. Physicochemical methods: when 1H NMR, 13C NMR, and HRMS are utilized to fully characterize all synthesized compounds. X-ray structural determination and analysis for compound 9a is also performed. The newly designed chromophores are assessed for their anti-proliferative potency against three selected human cancer cell lines (MCF-7, HepG2, and PC3), and one normal cell line (Dermal/Fibroblast). Compounds 9g and 9k have shown potent activities against the MCF-7 cell line with IC50 values of (2.00 ± 0.03 μM) and (5.00 ± 0.01 μM) respectively. ADMET studies and Molecular docking investigations are performed on the most active hybrid nitroimidazole derivatives 9g and 9k with 4-hydroxytamoxifen (4-OHT) at the human estrogen receptor alpha (hER) during binding active sites to study the ligand-protein interactions and free binding energies at atomic levels. The triazole ring in the 9g derivative forms a hydrogen bond with Asp58 with distance 3.2 Å. And it is found that polar contact with His231 amino acid residue. In silico assessment of the compounds showed very good pharmacokinetic properties based on their physicochemical values, also the ADMET criteria of the most active hybrid systems are within the acceptable range.
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Affiliation(s)
- SadeekahO.W. Saber
- Department of chemistry, School of Science, The University of Jordan, 11942, Amman, Jordan
- Faculty of Pharmacy, Jerash University, Amman-Irbid international highway, Jerash, 26150, Jordan
| | - Raed A. Al-Qawasmeh
- Department of chemistry, School of Science, The University of Jordan, 11942, Amman, Jordan
- Pure and Applied Chemistry Group, Department of Chemistry, College of Sciences, University of Sharjah, Sharjah, 27272, United Arab Emirates
| | | | - Amneh Shtaiwi
- Faculty of Pharmacy, Middle East University, Queen Alia Airport Street, 11610, Amman, Jordan
| | - Monther A. Khanfar
- Department of chemistry, School of Science, The University of Jordan, 11942, Amman, Jordan
- Pure and Applied Chemistry Group, Department of Chemistry, College of Sciences, University of Sharjah, Sharjah, 27272, United Arab Emirates
| | - Yaseen A. Al-Soud
- Chemistry Department, Faculty of Science, University of Al al-Bayt, Al-Mafraq, Jordan
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Rocha DHA, Machado CM, Sousa V, Sousa CFV, Silva VLM, Silva AMS, Borges J, Mano JF. Customizable and Regioselective One‐Pot N−H Functionalization of DNA Nucleobases to Create a Library of Nucleobase Derivatives for Biomedical Applications. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100786] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Djenisa H. A. Rocha
- CICECO – Aveiro Institute of Materials Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - Carmen M. Machado
- CICECO – Aveiro Institute of Materials Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - Vera Sousa
- CICECO – Aveiro Institute of Materials Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - Cristiana F. V. Sousa
- CICECO – Aveiro Institute of Materials Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - Vera L. M. Silva
- LAQV-REQUIMTE Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - Artur M. S. Silva
- LAQV-REQUIMTE Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - João Borges
- CICECO – Aveiro Institute of Materials Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - João F. Mano
- CICECO – Aveiro Institute of Materials Department of Chemistry University of Aveiro Campus Universitário de Santiago 3810-193 Aveiro Portugal
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Soltani Rad MN, Soleimani F. One-pot protocol for N-alkylation of purine, pyrimidine and azole derivatives via alcohols using Ph 3 P/I 2 : simple route for carboacyclic nucleoside synthesis. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.06.069] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Highly efficient protocol for one-pot N-alkylation of nucleobases using alcohols in bmim[Br]: a rapid route to access acyclic nucleosides. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2015. [DOI: 10.1007/s13738-015-0633-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Soltani Rad MN, Behrouz S, Asrari Z, Khalafi-Nezhad A. A simple and regioselective one-pot procedure for the direct N-acylation of some purine and pyrimidine nucleobases via carboxylic acids using cyanuric chloride. MONATSHEFTE FUR CHEMIE 2014. [DOI: 10.1007/s00706-014-1270-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Khalafi-Nezhad A, Divar M, Panahi F. Synthesis of α-aminonitriles with benzimidazolic and theophyllinic backbones using the Strecker reaction. J Org Chem 2013; 78:10902-8. [PMID: 24090186 DOI: 10.1021/jo401890g] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
An example of the application of the Strecker reaction in the synthesis of a new class of α-aminonitriles with benzimidazole and theophylline backbones has been developed. For the synthesis of these compounds, first 4-hydroxybenzaldehyde was reacted with 1,3- and 1,5-dibromides/epibromohydrin to produce the corresponding bromo-substituted aldehydes. Then, benzimidazole/theophylline was reacted with the latter to generate the related benzimidazolic/theophyllinic aldehydes. Finally, the Strecker reactions of the synthetic benzimidazolic and theophyllinic aldehydes with different amines afforded the target products.
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Affiliation(s)
- Ali Khalafi-Nezhad
- Department of Chemistry, College of Sciences, Shiraz University , Shiraz 71454, Iran
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Khalafi-Nezhad A, Panahi F, Golesorkhi B. One-Pot Synthesis of 5,7,8,9,9a,10-Hexahydro-8-thioxotetrahydropyrido[2,3-d : 6,5-d′]dipyrimidine-2,4,6(1H,3H,5aH)-trionesviaa Four-Component Coupling Reaction of Aldehydes, Amines, Barbituric Acids, and Thiouracil. Helv Chim Acta 2013. [DOI: 10.1002/hlca.201200350] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Khalafi-Nezhad A, Divar M, Panahi F. Nucleosides as reagents in multicomponent reactions: one-pot synthesis of heterocyclic nucleoside analogues incorporating pyrimidine-fused rings. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2012.11.003] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Zhang Q, Cheng G, Huang YZ, Qu GR, Niu HY, Guo HM. Regioselective N9 alkylation of purine rings assisted by β-cyclodextrin. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.07.025] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Rad MNS, Khalafi-Nezhad A, Divar M, Behrouz S. Silica Sulfuric Acid (SSA) as a Highly Efficient Heterogeneous Catalyst for Persilylation of Purine and Pyrimidine Nucleobases and Other N-Heterocycles Using Hmds. PHOSPHORUS SULFUR 2010. [DOI: 10.1080/10426500903383952] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
| | - Ali Khalafi-Nezhad
- b Department of Chemistry , College of Sciences, Shiraz University , Shiraz, Iran
| | - Masoumeh Divar
- b Department of Chemistry , College of Sciences, Shiraz University , Shiraz, Iran
| | - Somayeh Behrouz
- b Department of Chemistry , College of Sciences, Shiraz University , Shiraz, Iran
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Soltani Rad MN, Khalafi-Nezhad A, Behrouz S. Synthesis of some novel hydrazono acyclic nucleoside analogues. Beilstein J Org Chem 2010; 6:49. [PMID: 20563270 PMCID: PMC2887276 DOI: 10.3762/bjoc.6.49] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2010] [Accepted: 04/23/2010] [Indexed: 11/25/2022] Open
Abstract
The syntheses of novel hydrazono acyclic nucleosides similar to miconazole scaffolds are described. In this series of acyclic nucleosides, pyrimidine as well as purine and other azole derivatives replaced the imidazole function in miconazole and the ether group was replaced with a hydrazone moiety using phenylhydrazine. To interpret the dominant formation of (E)-hydrazone derivatives rather than (Z)-isomers, PM3 semiempirical quantum mechanic calculations were carried out which indicated that the (E)-isomers had the lower heats of formation.
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Affiliation(s)
- Mohammad N Soltani Rad
- Department of Chemistry, Faculty of Basic Sciences, Shiraz University of Technology, Shiraz 71555-313, Iran.
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Soltani Rad M, Khalafi-Nezhad A, Behrouz S. Design and Synthesis of Some Novel Oxiconazole-Like Carboacyclic Nucleoside Analogues, as Potential Chemotherapeutic Agents. Helv Chim Acta 2009. [DOI: 10.1002/hlca.200900051] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Soltani Rad MN, Khalafi-Nezhad A, Behrouz S, Faghihi M, Zare A, Parhami A. One-pot synthesis of N-alkyl purine and pyrimidine derivatives from alcohols using TsIm: a rapid entry into carboacyclic nucleoside synthesis. Tetrahedron 2008. [DOI: 10.1016/j.tet.2007.11.101] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Boncel S, Osyda D, Walczak KZ. N-1 regioselective Michael-type addition of 5-substituted uracils to (2-hydroxyethyl) acrylate. Beilstein J Org Chem 2007; 3:40. [PMID: 17996035 PMCID: PMC2151075 DOI: 10.1186/1860-5397-3-40] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2007] [Accepted: 11/08/2007] [Indexed: 11/30/2022] Open
Abstract
N-1 regioselective Michael-type addition of 5-substituted uracils to (2-hydroxyethyl) acrylate is presented. The reactions were performed in polar aprotic solvents and with avoidance of polymerization of acrylic substrate. The obtained adducts may serve as versatile substrates for further functionalization, e.g. into (3-uracil-1-yl)propanoic acids or transformations, with participation of hydroxyl group, into ester-conjugated acyclic nucleosides.
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Affiliation(s)
- Sławomir Boncel
- Department of Organic Chemistry, Biochemistry and Biotechnology Silesian University of Technology, Krzywoustego 4, PL-44100 Gliwice, Poland.
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