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Guarracino DA, Riordan JA, Barreto GM, Oldfield AL, Kouba CM, Agrinsoni D. Macrocyclic Control in Helix Mimetics. Chem Rev 2019; 119:9915-9949. [DOI: 10.1021/acs.chemrev.8b00623] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Danielle A. Guarracino
- Department of Chemistry, The College of New Jersey, Ewing, New Jersey 08628, United States
| | - Jacob A. Riordan
- Department of Chemistry, The College of New Jersey, Ewing, New Jersey 08628, United States
| | - Gianna M. Barreto
- Department of Chemistry, The College of New Jersey, Ewing, New Jersey 08628, United States
| | - Alexis L. Oldfield
- Department of Chemistry, The College of New Jersey, Ewing, New Jersey 08628, United States
| | - Christopher M. Kouba
- Department of Chemistry, The College of New Jersey, Ewing, New Jersey 08628, United States
| | - Desiree Agrinsoni
- Department of Chemistry, The College of New Jersey, Ewing, New Jersey 08628, United States
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Abe H, Sato C, Ohishi Y, Inouye M. Metathesis‐Based Stapling of a Pyridine–Acetylene–Phenol Oligomer Having Alkenyl Side Chains after Intermolecular Templation by Native Saccharides. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800531] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Hajime Abe
- Graduate School of Pharmaceutical Sciences University of Toyama Sugitani 2630 930‐0194 Toyama Japan
- Faculty of Pharmaceutical Sciences Himeji Dokkyo University Kami‐ono 7‐2‐1 670‐8524 Himeji Hyogo Japan
| | - Chihiro Sato
- Graduate School of Pharmaceutical Sciences University of Toyama Sugitani 2630 930‐0194 Toyama Japan
| | - Yuki Ohishi
- Graduate School of Pharmaceutical Sciences University of Toyama Sugitani 2630 930‐0194 Toyama Japan
| | - Masahiko Inouye
- Graduate School of Pharmaceutical Sciences University of Toyama Sugitani 2630 930‐0194 Toyama Japan
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Abe H, Kayamori F, Inouye M. Glycosyl-Templated Chiral Helix Stapling of Ethynylpyridine Oligomers by Alkene Metathesis between Inter-Pitch Side Chains. Chemistry 2015; 21:9405-13. [DOI: 10.1002/chem.201501102] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2015] [Indexed: 11/10/2022]
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Frączak O, Lasota A, Kosson P, Leśniak A, Muchowska A, Lipkowski AW, Olma A. Biphalin analogs containing β(3)-homo-amino acids at the 4,4' positions: Synthesis and opioid activity profiles. Peptides 2015; 66:13-8. [PMID: 25708417 DOI: 10.1016/j.peptides.2015.02.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/27/2014] [Revised: 02/11/2015] [Accepted: 02/11/2015] [Indexed: 10/24/2022]
Abstract
Biphalin, a synthetic opioid octapeptide with a palindromic sequence has high analgesic activity. Biphalin displays a strong affinity for μ and δ-opioid receptors, and a significant to κ-receptor. The paper reports the synthesis of novel analogs of biphalin containing β(3)-homo-amino acid residues at the 4,4' positions and a hydrazine or 1,2-phenylenediamine linker. The potency and selectivity of the peptides were evaluated by a competitive receptor-binding assay in rat brain homogenate using [(3)H]DAMGO (a μ ligand) and [(3)H]DELT (a δ ligand). Analogs with β(3)-h-p-NO2Phe in positions 4 and 4' are the most active compounds. Selectivity depends on the degree of freedom between the two pharmacophore moieties. Analogs with a hydrazine linker show noticeable binding selectivity to μ receptors (IC50(μ)=0.72nM; IC50(δ)=4.66nM), while the peptides with a 1,2-phenylenediamine linker show slight δ selectivity (IC50(μ)=10.97nM; IC50(δ)=1.99nM). Tyr-d-Ala-Gly-β(3)-h-p-NO2PheNHNH-β(3)-h-p-NO2Phe (1) and (Tyr-d-Ala-Gly-β(3)-h-p-NO2PheNH)2 (2) produced greater antinociceptive effect compared to morphine after i.t. administration.
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Affiliation(s)
- Oliwia Frączak
- Institute of Organic Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Lodz, Poland
| | - Anika Lasota
- Institute of Organic Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Lodz, Poland
| | - Piotr Kosson
- Mossakowski Medical Research Centre, Polish Academy of Sciences, Pawińskiego 5, 01-793 Warsaw, Poland
| | - Anna Leśniak
- Mossakowski Medical Research Centre, Polish Academy of Sciences, Pawińskiego 5, 01-793 Warsaw, Poland
| | - Adriana Muchowska
- Mossakowski Medical Research Centre, Polish Academy of Sciences, Pawińskiego 5, 01-793 Warsaw, Poland
| | - Andrzej W Lipkowski
- Mossakowski Medical Research Centre, Polish Academy of Sciences, Pawińskiego 5, 01-793 Warsaw, Poland
| | - Aleksandra Olma
- Institute of Organic Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Lodz, Poland.
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Podwysocka D, Kosson P, Lipkowski AW, Olma A. TAPP analogs containing β3-homo-amino acids: synthesis and receptor binding. J Pept Sci 2012; 18:556-9. [DOI: 10.1002/psc.2433] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2012] [Revised: 06/12/2012] [Accepted: 06/19/2012] [Indexed: 01/15/2023]
Affiliation(s)
- D. Podwysocka
- Institute of Organic Chemistry; Lodz University of Technology; Lodz; Poland
| | - P. Kosson
- Mossakowski Medical Research Centre; Polish Academy of Science; Warsaw; Poland
| | - A. W. Lipkowski
- Mossakowski Medical Research Centre; Polish Academy of Science; Warsaw; Poland
| | - A. Olma
- Institute of Organic Chemistry; Lodz University of Technology; Lodz; Poland
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Peddie V, Butcher RJ, Robinson WT, Wilce MCJ, Traore DAK, Abell AD. Synthesis and Conformation of Fluorinated β-Peptidic Compounds. Chemistry 2012; 18:6655-62. [DOI: 10.1002/chem.201200313] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2012] [Indexed: 11/08/2022]
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7
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Vaz E, Dames SA, Geyer M, Brunsveld L. Positional screening and NMR structure determination of side-chain-to-side-chain cyclized β3-peptides. Org Biomol Chem 2012; 10:1365-73. [DOI: 10.1039/c1ob06422c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Gopalan RD, Del Borgo MP, Bergman YE, Unabia S, Mulder RJ, Wilce MCJ, Wilce JA, Aguilar MI, Perlmutter P. Conformational stability studies of a stapled hexa-β3-peptide library. Org Biomol Chem 2012; 10:1802-6. [DOI: 10.1039/c2ob06617c] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Niggli DA, Ebert MO, Lin Z, Seebach D, van Gunsteren WF. Helical Content of a β3-Octapeptide in Methanol: Molecular Dynamics Simulations Explain a Seeming Discrepancy between Conclusions Derived from CD and NMR Data. Chemistry 2011; 18:586-93. [DOI: 10.1002/chem.201102667] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2011] [Indexed: 11/08/2022]
Affiliation(s)
- Damaris A Niggli
- Laboratory of Physical Chemistry, Swiss Federal Institute of Technology, ETH, 8093 Zürich, Switzerland
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Jacobsen Ø, Maekawa H, Ge NH, Görbitz CH, Rongved P, Ottersen OP, Amiry-Moghaddam M, Klaveness J. Stapling of a 310-Helix with Click Chemistry. J Org Chem 2011; 76:1228-38. [DOI: 10.1021/jo101670a] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Øyvind Jacobsen
- School of Pharmacy, University of Oslo, P.O. Box 1068 Blindern, 0316 Oslo, Norway
| | - Hiroaki Maekawa
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, United States
| | - Nien-Hui Ge
- Department of Chemistry, University of California at Irvine, Irvine, California 92697-2025, United States
| | - Carl Henrik Görbitz
- Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, 0315 Oslo, Norway
| | - Pål Rongved
- School of Pharmacy, University of Oslo, P.O. Box 1068 Blindern, 0316 Oslo, Norway
| | - Ole Petter Ottersen
- Centre for Molecular Biology and Neuroscience, University of Oslo, P.O. Box 1105 Blindern, 0317 Oslo, Norway
| | - Mahmood Amiry-Moghaddam
- Centre for Molecular Biology and Neuroscience, University of Oslo, P.O. Box 1105 Blindern, 0317 Oslo, Norway
| | - Jo Klaveness
- School of Pharmacy, University of Oslo, P.O. Box 1068 Blindern, 0316 Oslo, Norway
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Herndon JW. The chemistry of the carbon–transition metal double and triple bond: Annual survey covering the year 2009. Coord Chem Rev 2011. [DOI: 10.1016/j.ccr.2010.07.003] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Jacobsen Ø, Klaveness J, Rongved P. Structural and pharmacological effects of ring-closing metathesis in peptides. Molecules 2010; 15:6638-77. [PMID: 20877250 PMCID: PMC6257744 DOI: 10.3390/molecules15096638] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2010] [Revised: 09/13/2010] [Accepted: 09/15/2010] [Indexed: 11/16/2022] Open
Abstract
Applications of ring-closing alkene metathesis (RCM) in acyclic α- and β-peptides and closely related systems are reviewed, with a special emphasis on the structural and pharmacological effects of cyclization by RCM.
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Bautista AD, Appelbaum JS, Craig CJ, Michel J, Schepartz A. Bridged beta(3)-peptide inhibitors of p53-hDM2 complexation: correlation between affinity and cell permeability. J Am Chem Soc 2010; 132:2904-6. [PMID: 20158215 DOI: 10.1021/ja910715u] [Citation(s) in RCA: 108] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Beta-peptides possess several features that are desirable in peptidomimetics; they are easily synthesized, fold into stable secondary structures in physiologic buffers, and resist proteolysis. They can also bind to a diverse array of proteins to inhibit their interactions with alpha-helical ligands. beta-peptides are usually not cell-permeable, however, and this feature limits their utility as research tools and potential therapeutics. Appending an Arg(8) sequence to a beta-peptide improves uptake but adds considerable mass. We previously reported that embedding a small cationic patch within a PPII, alpha-, or beta-peptide helix improves uptake without the addition of significant mass. In another mass-neutral strategy, Verdine, Walensky, and others have reported that insertion of a hydrocarbon bridge between the i and i + 4 positions of an alpha-helix also increases cell uptake. Here we describe a series of beta-peptides containing diether and hydrocarbon bridges and compare them on the basis of cell uptake and localization, affinities for hDM2, and 14-helix structure. Our results highlight the relative merits of the cationic-patch and hydrophobic-bridge strategies for improving beta-peptide uptake and identify a surprising correlation between uptake efficiency and hDM2 affinity.
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Affiliation(s)
- Arjel D Bautista
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, USA
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