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Gao ZX, Wang H, Su AH, Li QY, Liang Z, Zhang YQ, Liu XY, Zhu MZ, Zhang HX, Hou YT, Li X, Sun LR, Li J, Xu ZJ, Lou HX. Asymmetric Synthesis and Biological Evaluation of Platensilin, Platensimycin, Platencin, and Their Analogs via a Bioinspired Skeletal Reconstruction Approach. J Am Chem Soc 2024; 146:18967-18978. [PMID: 38973592 DOI: 10.1021/jacs.4c02256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/09/2024]
Abstract
Platensilin, platensimycin, and platencin are potent inhibitors of β-ketoacyl-acyl carrier protein synthase (FabF) in the bacterial and mammalian fatty acid synthesis system, presenting promising drug leads for both antibacterial and antidiabetic therapies. Herein, a bioinspired skeleton reconstruction approach is reported, which enables the unified synthesis of these three natural FabF inhibitors and their skeletally diverse analogs, all stemming from a common ent-pimarane core. The synthesis features a diastereoselective biocatalytic reduction and an intermolecular Diels-Alder reaction to prepare the common ent-pimarane core. From this intermediate, stereoselective Mn-catalyzed hydrogen atom-transfer hydrogenation and subsequent Cu-catalyzed carbenoid C-H insertion afford platensilin. Furthermore, the intramolecular Diels-Alder reaction succeeded by regioselective ring opening of the newly formed cyclopropane enables the construction of the bicyclo[3.2.1]-octane and bicyclo[2.2.2]-octane ring systems of platensimycin and platencin, respectively. This skeletal reconstruction approach of the ent-pimarane core facilitates the preparation of analogs bearing different polycyclic scaffolds. Among these analogs, the previously unexplored cyclopropyl analog 47 exhibits improved antibacterial activity (MIC80 = 0.0625 μg/mL) against S. aureus compared to platensimycin.
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Affiliation(s)
- Zong-Xu Gao
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Hongliang Wang
- School of Pharmaceutical Sciences & Institute of Materia Medica, State Key Laboratory of Advanced Drug Delivery System, Shandong First Medical University & Shandong Academy of Medical Sciences, No. 6699, Qingdao Rd, Jinan 250117, P. R. China
| | - Ai-Hong Su
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Qian-Ying Li
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Zhen Liang
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Yue-Qing Zhang
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Xu-Yuan Liu
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Ming-Zhu Zhu
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Hai-Xia Zhang
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Yue-Tong Hou
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Xin Li
- School of Pharmaceutical Sciences & Institute of Materia Medica, State Key Laboratory of Advanced Drug Delivery System, Shandong First Medical University & Shandong Academy of Medical Sciences, No. 6699, Qingdao Rd, Jinan 250117, P. R. China
| | - Long-Ru Sun
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Jian Li
- Frontiers Science Center for Transformative Molecules, School of Chemistry and Chemical Engineering, Zhangjiang Institute for Advanced Study, Shanghai Jiao Tong University, No. 429, Zhangheng Rd, Shanghai 200213, P. R. China
| | - Ze-Jun Xu
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
| | - Hong-Xiang Lou
- Department of Natural Products Chemistry, Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, No. 44, Wenhuaxi Rd, Jinan 250012, P. R. China
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Hong YJ, Tantillo DJ. A Maze of Dyotropic Rearrangements and Triple Shifts: Carbocation Rearrangements Connecting Stemarene, Stemodene, Betaerdene, Aphidicolene, and Scopadulanol. J Org Chem 2018; 83:3780-3793. [PMID: 29494166 DOI: 10.1021/acs.joc.8b00138] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Results of quantum chemical investigations shed new light on the mechanisms of formation of the stemarene, stemodene, betaerdene, aphidicolene, and scopadulanol diterpenes from syn-copalyl diphosphate ( syn-CPP). These terpenes are shown to be connected by a complex network of reaction pathways involving concerted but asynchronous dyotropic rearrangements and triple shift rearrangements. The interconnection of these pathways leads to multiple routes for formation of each diterpene, which could lead to different origins for some carbon atoms in a given diterpenes under different conditions.
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Affiliation(s)
- Young J Hong
- Department of Chemistry , University of California-Davis , Davis , California 95616 , United States
| | - Dean J Tantillo
- Department of Chemistry , University of California-Davis , Davis , California 95616 , United States
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3
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Weber M, Owens K, Sarpong R. Atropurpuran - Missing Biosynthetic Link Leading to the Hetidine and Arcutine C 20-Diterpenoid Alkaloids or an Oxidative Degradation Product? Tetrahedron Lett 2015; 56:3600-3603. [PMID: 26028789 DOI: 10.1016/j.tetlet.2015.01.111] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A possible biosynthetic link between atropurpuran, the hetidine diterpenoid alkaloids and the alkaloid arcutine and congeners is proposed. The feasibility of aspects of this biosynthesis, especially key 1,2-rearrangements, have been examined computationally.
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Affiliation(s)
- Manuel Weber
- Latimer Hall, Department of Chemistry, University of California, Berkeley, CA 94720, Tel: 510-643-6312
| | - Kyle Owens
- Latimer Hall, Department of Chemistry, University of California, Berkeley, CA 94720, Tel: 510-643-6312
| | - Richmond Sarpong
- Latimer Hall, Department of Chemistry, University of California, Berkeley, CA 94720, Tel: 510-643-6312
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4
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Abstract
This review covers the isolation and chemistry of diterpenoids from terrestrial as opposed to marine sources and includes, labdanes, clerodanes, pimaranes, abietanes, kauranes, gibberellins, cembranes and their cyclization products. The literature from January to December, 2014 is reviewed.
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5
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Zi J, Matsuba Y, Hong YJ, Jackson AJ, Tantillo DJ, Pichersky E, Peters RJ. Biosynthesis of lycosantalonol, a cis-prenyl derived diterpenoid. J Am Chem Soc 2014; 136:16951-3. [PMID: 25406026 PMCID: PMC4277783 DOI: 10.1021/ja508477e] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
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Terpenoid
natural products are generally derived from isoprenyl
diphosphate precursors with trans double-bond configuration, and no
diterpenoid derived from the cisoid precursor (Z,Z,Z)-nerylneryl diphosphate (1) has yet been identified. Here further investigation of a terpenoid
biosynthetic gene cluster from tomato is reported, which resulted
in identification of a biosynthetic pathway from 1, in
a pathway featuring a number of interesting transformations. Compound 1 is first cyclized to a tricyclene core ring structure analogous
to that found in α-santalene, with the resulting diterpene termed
here lycosantalene (2). Quantum chemical calculations
indicate a role for the diphosphate anion coproduct in this cyclization
reaction. Subsequently, the internal cis double bond of the neryl
side chain in 2 is then further transformed to an α-hydroxy
ketone moiety via an epoxide intermediate (3). Oxygen
labeling studies indicate 3 undergoes oxidative conversion
to lycosantalonol (4). Thus, in addition to elucidating
the cisoid origins of 4, this work has further provided
mechanistic insight into the interesting transformations required
for its production.
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Affiliation(s)
- Jiachen Zi
- Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University , Ames, Iowa 50011, United States
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