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Pintarič M, Štuhec A, Tratnik E, Langerholc T. Specific Fertilization Practices Reveal Important Insights into the Complex Interaction Between Microbes and Enzymes in Soils of Different Farming Systems. Life (Basel) 2024; 14:1562. [PMID: 39768270 PMCID: PMC11676776 DOI: 10.3390/life14121562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2024] [Revised: 11/25/2024] [Accepted: 11/25/2024] [Indexed: 01/11/2025] Open
Abstract
The interaction of microorganisms and their enzyme activity is one of the key indicators for a comprehensive measurement of soil health. The aim of this study was to determine significant correlations between different soil microorganisms and enzyme activities of β-glucosidase, N-acetyl-glucosaminidase, urease, arylamidase, phosphatase, acid phosphatase, alkaline phosphatase, and arylsulfatase after supplementation with standard fertilizer, spent mushroom substrate and composed fertilizer in soils from conventional-integrated, organic and biodynamic farming. Samples were grouped according to the farming system and fertilization for all seasons. The biodynamic farm was the least affected by the different fertilizations, except for standard fertilization. Standard fertilizer caused negative correlations between the actinomycetes and the arylsulfatase in organic and biodynamic farms. The same fertilization affected the actinomycetes/phosphatase relationship differently, regardless of the basic soil structure. Actinomycetes correlated positively with acid phosphatase and urease in conventional-integrated and biodynamic farms after spent mushroom substrate, respectively. Arylamidase activity in relation to total microorganisms responded to fertilization with standard fertilizer and spent mushroom substrate independently of the basic soil structure. Fertilization can influence the soil microbe/enzyme relationships in different soils. Regardless of the basic soil structure, some of these relationships could be important indicators for further studies.
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Affiliation(s)
- Maša Pintarič
- Department of Microbiology, Biochemistry, Molecular Biology and Biotechnology, Faculty of Agriculture and Life Sciences, University of Maribor, Pivola 10, 2311 Hoče, Slovenia; (A.Š.); (E.T.); (T.L.)
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Franco A, Vieira D, Clerbaux LA, Orgiazzi A, Labouyrie M, Köninger J, Silva V, van Dam R, Carnesecchi E, Dorne JLCM, Vuaille J, Lobo Vicente J, Jones A. Evaluation of the ecological risk of pesticide residues from the European LUCAS Soil monitoring 2018 survey. INTEGRATED ENVIRONMENTAL ASSESSMENT AND MANAGEMENT 2024; 20:1639-1653. [PMID: 38602265 DOI: 10.1002/ieam.4917] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 02/01/2024] [Accepted: 03/07/2024] [Indexed: 04/12/2024]
Abstract
The 2018 LUCAS (Land Use and Coverage Area frame Survey) Soil Pesticides survey provides a European Union (EU)-scale assessment of 118 pesticide residues in more than 3473 soil sites. This study responds to the policy need to develop risk-based indicators for pesticides in the environment. Two mixture risk indicators are presented for soil based, respectively, on the lowest and the median of available No Observed Effect Concentration (NOECsoil,min and NOECsoil,50) from publicly available toxicity datasets. Two further indicators were developed based on the corresponding equilibrium concentration in the aqueous phase and aquatic toxicity data, which are available as species sensitivity distributions. Pesticides were quantified in 74.5% of the sites. The mixture risk indicator based on the NOECsoil,min exceeds 1 in 14% of the sites and 0.1 in 23%. The insecticides imidacloprid and chlorpyrifos and the fungicide epoxiconazole are the largest contributors to the overall risk. At each site, one or a few substances drive mixture risk. Modes of actions most likely associated with mixture effects include modulation of acetylcholine metabolism (neonicotinoids and organophosphate substances) and sterol biosynthesis inhibition (triazole fungicides). Several pesticides driving the risk have been phased out since 2018. Following LUCAS surveys will determine the effectiveness of substance-specific risk management and the overall progress toward risk reduction targets established by EU and UN policies. Newly generated data and knowledge will stimulate needed future research on pesticides, soil health, and biodiversity protection. Integr Environ Assess Manag 2024;20:1639-1653. © 2024 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC).
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Affiliation(s)
- Antonio Franco
- European Commission, Joint Research Centre (JRC), Ispra, Italy
| | - Diana Vieira
- European Commission, Joint Research Centre (JRC), Ispra, Italy
| | - Laure-Alix Clerbaux
- European Commission, Joint Research Centre (JRC), Ispra, Italy
- Institute of Experimental and Clinical Research, University of Louvain, Louvain, Belgium
| | - Alberto Orgiazzi
- European Commission, Joint Research Centre (JRC), Ispra, Italy
- European Dynamics, Brussels, Belgium
| | - Maeva Labouyrie
- Plant-Soil-Interactions, Research Division Agroecology and Environment, Agroscope, Zürich, Switzerland
- Department of Plant and Microbial Biology, University of Zurich, Zürich, Switzerland
| | - Julia Köninger
- Departamento de Ecología y Biología Animal, Universidade de Vigo, Vigo, Spain
| | - Vera Silva
- Soil Physics and Land Management Group, Wageningen University & Research, Wageningen, The Netherlands
| | - Ruud van Dam
- Wageningen Food Safety Research (WFSR), Wageningen University & Research, Wageningen, The Netherlands
| | | | | | | | | | - Arwyn Jones
- European Commission, Joint Research Centre (JRC), Ispra, Italy
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Kotschik P, Princz J, Silva CDLE, Renaud M, Marti-Roura M, Brooks B, Pieper S, Rijk I, Simini M, Andres S, Scholz-Starke B, Grenni P. The upcoming European Soil Monitoring Law: An effective instrument for the protection of terrestrial ecosystems? INTEGRATED ENVIRONMENTAL ASSESSMENT AND MANAGEMENT 2024; 20:316-321. [PMID: 37610145 DOI: 10.1002/ieam.4834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Revised: 08/04/2023] [Accepted: 08/14/2023] [Indexed: 08/24/2023]
Abstract
Soils are a precious resource consistently placed under several threats and urgently in need of protection within a regulatory framework at the European level. Soils are central to the provision of environmental services as well as human existence on earth. The need to protect soil has been identified by several recent European strategies and fortunately, a specific European regulation for soil protection is on the way-the European Soil Monitoring Law (formerly: Soil Health Law). However, efforts need to ensure that the upcoming Soil Monitoring Law closes gaps between existing regulations for chemicals and acknowledges current European strategies for environmental protection and sustainability. This brief communication started from a fruitful discussion among SETAC Global Soils Interest Group members on a recent public consultation on the newly proposed Soil Monitoring Law of the European Commission and highlights critical points focusing on the chemical pollution of soils. We emphasize urgent needs such as the essential definition of a "healthy state" of soils; the implementation of a suitable set of indicators and quality standards for the description of physical, chemical, and biological states of soils; the enforcement of the "polluter-pays" principle; and the establishment of a Europe-wide monitoring program. Results from monitoring need to be fed back into regulatory frameworks, including the regulation of chemicals. Guidance documents for the risk assessment of chemicals are outdated and need to be updated. Finally, actions need to be taken to foster healthy soils, stop biodiversity decline, and ensure the functioning of ecosystem services for future generations. Integr Environ Assess Manag 2024;20:316-321. © 2023 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC).
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Affiliation(s)
| | | | | | - Mathieu Renaud
- Swiss Centre for Applied Ecotoxicology, Lausanne, Switzerland
| | | | - Bonnie Brooks
- Washington Department of Ecology, Lacey, Washington, USA
| | | | | | | | | | | | - Paola Grenni
- Water Research Institute, National Research Council, Rome, Italy
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Marín-Guirao JI, García-García MDC, Martín-Expósito E, de Cara-García M. Continued Organic Fertigation after Basal Manure Application Does Not Impact Soil Fungal Communities, Tomato Yield or Soil Fertility. Microorganisms 2023; 11:1715. [PMID: 37512888 PMCID: PMC10386759 DOI: 10.3390/microorganisms11071715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 06/21/2023] [Accepted: 06/26/2023] [Indexed: 07/30/2023] Open
Abstract
There is currently a limited understanding of the complex response of fungal microbiota diversity to organic fertigation. In this work, a 2-year field trial with organic tomato crops in a soil previously amended with fresh sheep manure was conducted. Two hypotheses were compared: (i) fertigation with organic liquid fertilizers versus (ii) irrigation with water. At the end of both years, soils were analyzed for physical-chemical parameters and mycobiome variables. Plate culture and DNA metabarcoding methods were performed in order to obtain a detailed understanding of soil fungal communities. Fertigation did not increase any of the physical-chemical parameters. Concerning soil fungal communities, differences were only found regarding the identification of biomarkers. The class Leotiomycetes and the family Myxotrichaceae were identified as biomarkers in the soil fungal community analyzed by means of DNA metabarcoding of the "fertigation" treatment at the end of Year 1. The Mortierella genus was detected as a biomarker in the "water" treatment, and Mucor was identified in the "fertigation" treatment in the cultivable soil fungi at the end of Year 2. In both years, tomato yield and fruit quality did not consistently differ between treatments, despite the high cost of the fertilizers added through fertigation.
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Affiliation(s)
- Jose Ignacio Marín-Guirao
- Andalusian Institute of Agricultural and Fisheries Research Training (IFAPA) La Mojonera, Camino San Nicolás, 1, 04745 Almería, Spain
| | - María Del Carmen García-García
- Andalusian Institute of Agricultural and Fisheries Research Training (IFAPA) La Mojonera, Camino San Nicolás, 1, 04745 Almería, Spain
| | - Emilio Martín-Expósito
- Andalusian Institute of Agricultural and Fisheries Research Training (IFAPA) La Mojonera, Camino San Nicolás, 1, 04745 Almería, Spain
| | - Miguel de Cara-García
- Andalusian Institute of Agricultural and Fisheries Research Training (IFAPA) La Mojonera, Camino San Nicolás, 1, 04745 Almería, Spain
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Höss S, Reiff N, Asekunowo J, Helder J. Nematode Community of a Natural Grassland Responds Sensitively to the Broad-Spectrum Fungicide Mancozeb in Soil Microcosms. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2022; 41:2420-2430. [PMID: 35815477 DOI: 10.1002/etc.5427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 06/28/2022] [Accepted: 07/03/2022] [Indexed: 06/15/2023]
Abstract
Fungicides make up the largest part of total pesticide use, with the dithiocarbamate mancozeb being widely applied as a nonsystemic contact pesticide to protect a wide range of field crops against fungal diseases. Although nematodes are key drivers of soil functioning, data on effects of fungicides, and especially mancozeb, on these nontarget organisms are scarce. Therefore, the effects of mancozeb on a soil nematode community from a natural grassland were assessed in small-scale soil microcosms. Nematodes were exposed to mancozeb-spiked soil in six nominal concentrations (7-133 mg/kg dry soil) and analyzed after 14, 56, and 84 days in terms of densities, genus composition, and functional traits. Because this fungicide is known to quickly degrade in soils (50% degradation time <1 day), mancozeb concentrations were analyzed for all sampling occasions. Chemical analysis revealed considerably lower measured concentrations compared with the aimed nominal soil concentrations at the beginning of the exposure (1-18 mg/kg dry soil), suggesting fast degradation during the spiking process. Nevertheless, the native nematode community responded sensitively to the fungicide mancozeb, revealing lower no-observed-effect concentration and 10% effect concentration (EC10) values than reported for other soil invertebrates such as springtails and earthworms. Using the EC10 for the most sensitive nematode community endpoint (percentage of predators and omnivores: 1.2 mg/kg dry soil), the risk assessment exhibited a toxicity exposure ratio of 0.66 and, thus, a high risk of mancozeb for soil nematodes. Keeping in mind their abundance and their central roles in soil food-web functioning, the demonstrated sensitivity to a widely applied fungicide underscores the relevance of the inclusion of nematodes into routine risk-assessment programs for pesticides. Environ Toxicol Chem 2022;41:2420-2430. © 2022 SETAC.
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Affiliation(s)
| | | | | | - Johannes Helder
- Laboratory of Nematology, Wageningen University, Wageningen, The Netherlands
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