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Kaluva S, Karri VL, Kharat B, Naganathappa M. Many-body analysis and spectroscopic characterization of diazene oligomers: A theoretical study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 287:121957. [PMID: 36371876 DOI: 10.1016/j.saa.2022.121957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Revised: 09/24/2022] [Accepted: 10/05/2022] [Indexed: 06/16/2023]
Abstract
The present study reports the many-body analysis and spectroscopic characterization of linear and cyclic diazene oligomers in gas and water solvent states. The oligomers of diazene from monomer to pentamer have been considered for the study. The spectroscopic studies such as geometrical parameters, infrared spectra, electronic absorption spectra, and natural transition orbitals (NTOs) were reported. Many-body analysis techniques have been implemented to study the interactions among the diazene oligomers. These calculations have been performed using exchange and correlation functional (B3LYP) and 6-311++G (d,p) basis set. The geometrical parameters and infrared modes of monomer diazene in the gas state are well-matched with the available experimental determinations at this level of theory. A significant change in vibrational modes of linear and cyclic diazene oligomers has been observed in the gas phase-to-water solvent state. The time-dependent density functional theory (TD-DFT) has been used to calculate the electronic absorption spectra of diazene oligomers. The Wavelength of electronic transitions, oscillator strength, and HOMO to LUMO gap has been reported. Many-body analysis shows that two-, three-, four-, and five-body energies have a remarkable contribution to the binding energy in addition to relaxation energies. All these calculations have been performed using Gaussian 16 program package.
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Affiliation(s)
- Sumalya Kaluva
- Department of Physics, School of Science, GITAM (Deemed to be University), Hyderabad 502329, TS, India
| | - Venkata Lakshmi Karri
- Department of Physics, School of Science, GITAM (Deemed to be University), Hyderabad 502329, TS, India
| | - Bhagwat Kharat
- Department of Physics, Swami Vivekanand Senior College, Mantha 431504, MH, India
| | - Mahadevappa Naganathappa
- Department of Physics, School of Science, GITAM (Deemed to be University), Hyderabad 502329, TS, India.
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Sindhu A, Pradhan R, Lourderaj U, Paranjothy M. Theoretical investigation of the isomerization pathways of diazenes: torsion vs. inversion. Phys Chem Chem Phys 2019; 21:15678-15685. [PMID: 31271157 DOI: 10.1039/c8cp05953e] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Diazenes are an important family of organic compounds used widely in synthetic and materials chemistry. These molecules have a planar geometry and exhibit cis-trans isomerization. The simplest of all these molecules - diazene (N2H2) - has been subjected to several experimental and theoretical studies. Two mechanisms have been proposed for the cis-trans isomerization of diazene, which are an in-plane inversion and an out-of-plane torsion. The activation energies for these pathways are similar and the competition between these two mechanisms has been discussed in the literature based on electronic structure theory calculations. Three decades ago, a classical dynamics investigation of diazene isomerization was carried out using a model Hamiltonian and it was indicated that the in-plane inversion is forbidden classically because of a centrifugal barrier and the out-of-plane torsion is the only isomerization pathway. In the present work, we investigated the cis-trans isomerization dynamics of diazene using ab initio classical trajectory simulations at the CASSCF(2,2)/aug-cc-pVDZ level of electronic structure theory. The simulation results confirmed the presence of the aforementioned centrifugal barrier for the inversion and torsion was the only observed pathway. The calculations were repeated for a similar system (difluorodiazene, N2F2) and again the centrifugal barrier prevented the inversion pathway.
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Affiliation(s)
- Aarti Sindhu
- Department of Chemistry, Indian Institute of Technology Jodhpur, Jodhpur, Rajasthan, India.
| | - Renuka Pradhan
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, P. O. Jatni, Khurda, India
| | - Upakarasamy Lourderaj
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, P. O. Jatni, Khurda, India
| | - Manikandan Paranjothy
- Department of Chemistry, Indian Institute of Technology Jodhpur, Jodhpur, Rajasthan, India.
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Barquera-Lozada JE, Cuevas G. Are boat transition states likely to occur in Cope rearrangements? A DFT study of the biogenesis of germacranes. Beilstein J Org Chem 2017; 13:1969-1976. [PMID: 29062416 PMCID: PMC5629395 DOI: 10.3762/bjoc.13.192] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2017] [Accepted: 08/24/2017] [Indexed: 01/18/2023] Open
Abstract
It has been proposed that elemanes are biogenetically formed from germacranes by Cope sigmatropic rearrangements. Normally, this reaction proceeds through a transition state with a chair conformation. However, the transformation of schkuhriolide (germacrane) into elemanschkuhriolide (elemane) may occur through a boat transition state due to the final configuration of the elemanschkuhriolide, but this transition state is questionable due to its high energy. The possible mechanisms of this transformation were studied in the density functional theory frame. The mechanistic differences between the transformation of (Z,E)-germacranes and (E,E)-germacranes were also studied. We found that (Z,E)-germacranolides are significantly more stable than (E,E)-germacranolides and elemanolides. In the specific case of schkuhriolide, even when the boat transition state is not energetically favored, a previous hemiacetalization lowers enough the energetic barrier to allow the formation of a very stable elemanolide that is even more stable than its (Z,E)-germacrane.
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Affiliation(s)
- José Enrique Barquera-Lozada
- Instituto de Química, Universidad Nacional Autónoma de México, Apdo. Postal 70213, 04510, Coyoacán, Circuito Exterior, Ciudad de México, Mexico
| | - Gabriel Cuevas
- Instituto de Química, Universidad Nacional Autónoma de México, Apdo. Postal 70213, 04510, Coyoacán, Circuito Exterior, Ciudad de México, Mexico
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San-Fabián E, Moscardó F. Cyclobutadiene automerization and rotation of ethylene: energetics of the barriers by using spin-polarized wave functions. J Comput Chem 2014; 35:1356-63. [PMID: 24817406 DOI: 10.1002/jcc.23630] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2014] [Revised: 04/10/2014] [Accepted: 04/14/2014] [Indexed: 11/08/2022]
Abstract
Spin-projected spin polarized Møller-Plesset and spin polarized coupled clusters calculations have been made to estimate the cyclobutadiene automerization, the ethylene torsion barriers in their ground state, and the gap between the singlet and triplet states of ethylene. The results have been obtained optimizing the geometries at MP4 and/or CCSD levels, by an extensive Gaussian basis set. A comparative analysis with more complex calculations, up to MP5 and CCSDTQP, together with others from the literature, have also been made, showing the efficacy of using spin-polarized wave functions as a reference wave function for Møller-Plesset and coupled clusters calculations, in such problems.
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Affiliation(s)
- Emilio San-Fabián
- Departamento de Química Física, Unidad Asociada del CSIC e Instituto Universitario de Materiales, Universidad de Alicante, San Vicente del Raspeig, 03690, Alicante, Spain
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Zen A, Coccia E, Luo Y, Sorella S, Guidoni L. Static and Dynamical Correlation in Diradical Molecules by Quantum Monte Carlo Using the Jastrow Antisymmetrized Geminal Power Ansatz. J Chem Theory Comput 2014; 10:1048-61. [DOI: 10.1021/ct401008s] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Andrea Zen
- Dipartimento
di Fisica, Sapienza-Università di Roma, Piazzale Aldo Moro
5, 00185 Rome, Italy
| | - Emanuele Coccia
- Dipartimento
di Scienze Fisiche e Chimiche, Università degli Studi dell’Aquila, Via Vetoio 2, 67010 L’Aquila, Italy
| | - Ye Luo
- Scuola
Internazionale Superiore di Studi Avanzati (SISSA) and Democritos
National Simulation Center, Istituto Officina dei Materiali del CNR, via Bonomea 265, 34136 Trieste, Italy
| | - Sandro Sorella
- Scuola
Internazionale Superiore di Studi Avanzati (SISSA) and Democritos
National Simulation Center, Istituto Officina dei Materiali del CNR, via Bonomea 265, 34136 Trieste, Italy
| | - Leonardo Guidoni
- Dipartimento
di Scienze Fisiche e Chimiche, Università degli Studi dell’Aquila, Via Vetoio 2, 67010 L’Aquila, Italy
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Melnichuk A, Bartlett RJ. Relaxed active space: Fixing tailored-CC with high order coupled cluster. II. J Chem Phys 2014; 140:064113. [DOI: 10.1063/1.4862676] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Sancho-García JC, Adamo C. Double-hybrid density functionals: merging wavefunction and density approaches to get the best of both worlds. Phys Chem Chem Phys 2013; 15:14581-94. [DOI: 10.1039/c3cp50907a] [Citation(s) in RCA: 85] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Lei Y, Wang Y, Han H, Song Q, Suo B, Wen Z. New implementation of the configuration-based multi-reference second order perturbation theory. J Chem Phys 2012; 137:144102. [DOI: 10.1063/1.4757264] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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State specific multireference Møller–Plesset perturbation theory: A few applications to ground, excited and ionized states. Chem Phys 2012. [DOI: 10.1016/j.chemphys.2011.04.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Mahapatra US, Chattopadhyay S. Diagnosis of the performance of the state-specific multireference coupled-cluster method with different truncation schemes. J Comput Chem 2012; 33:1285-303. [PMID: 22419455 DOI: 10.1002/jcc.22960] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2011] [Revised: 02/06/2012] [Accepted: 02/07/2012] [Indexed: 11/06/2022]
Abstract
We have tested the linked version of a iterative (partial) triples correction for the Jeziorski-Monkhorst ansatz based state-specific multireference coupled cluster (SS-MRCC) approach with singles and doubles (SD) excitations [abbreviated as SS-MRCCSDT-1a and SS-MRCCSDT-1a+d]. The assessments of SS-MRCCSDT-1a and SS-MRCCSDT-1a+d schemes have been performed on the ground potential energy surface (PES) of P4, Li(2),Be(2) systems which demand the MR description, and on study of the excitation energy between the ground and first excited state for P4 system. Illustrations in the isomerization of cyclobutadiene also show the power of the schemes. One of the designed features of the SS-MRCCSDT-n methods introduced here is that they do not require storage of the triples amplitudes. In the entire range of geometries, we found a definite improvement provided by SS-MRCC with SDT-1a and SDT-1a+d schemes over the standard SD one. In the nondegenerate regions of PES, the closeness of the performance of the single-reference CC to the SS-MRCC methods increases after inclusion of even partial triple excitations. Generally, the performance of the SS-MRCCSDT-1a+d approach is closer to the corresponding full configuration interaction (FCI) one than to the SS-MRCCSDT-1a specially in the degenerate geometries (as is evident from nonparallelism error). The deviation from FCI for the first excited state of the P4 model using various SS-MRCC theories with different truncation schemes obtained by converging on the second root of the effective Hamiltonian has also been reported. We also compare our results with the current generation state-of-the-art single and multireference CC calculations to envisage the usefulness of the present approach. Initial implementation indicates that the SS-MRCCSDT-n formalism can provide not only reliable excitation energies and barrier height even when used in a relatively small model space, but also offers a considerable promise in generating the entire energy surface with low nonparallelity error.
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Affiliation(s)
- Uttam Sinha Mahapatra
- Department of Physics, Maulana Azad College, 8 Rafi Ahmed KidwaiRoad, Kolkata 700013, India.
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Mao S, Cheng L, Liu W, Mukherjee D. A spin-adapted size-extensive state-specific multi-reference perturbation theory. I. Formal developments. J Chem Phys 2012; 136:024105. [DOI: 10.1063/1.3672083] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Sancho-García JC. Further evidences of the quality of double-hybrid energy functionals for π-conjugated systems. J Chem Phys 2011; 134:234102. [DOI: 10.1063/1.3598482] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
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