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Alshahrani S, Al-Majid AM, Alamary AS, Ali M, Altowyan MS, Ríos-Gutiérrez M, Yousuf S, Barakat A. Synthesis and Characterization of New Spirooxindoles Including Triazole and Benzimidazole Pharmacophores via [3+2] Cycloaddition Reaction: An MEDT Study of the Mechanism and Selectivity. Molecules 2023; 28:6976. [PMID: 37836817 PMCID: PMC10574610 DOI: 10.3390/molecules28196976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 10/01/2023] [Accepted: 10/04/2023] [Indexed: 10/15/2023] Open
Abstract
A new series of spirooxindoles based on benzimidazole, triazole, and isatin moieties were synthesized via a [3+2] cycloaddition reaction protocol in one step. The single X-ray crystal structure of the intermediate triazole-benzimidazole 4 was solved. The new chemical structures of these spirooxindole molecules have been achieved for the first time. The final synthesized chemical architecture has differently characterized electronic effects. An MEDT study of the key 32CA reaction between in situ generated azomethine ylide (AY) and chalcones explained the low reaction rates and the total selectivities observed. The supernucleophilic character of AY and the strong electrophilicity of chalcones favor these reactions through a highly polar two-stage one-step mechanism in which bond formation at the β-conjugated carbon of the chalcones is more advanced. The present combined experimental and theoretical study reports the synthesis of new spirooxindoles with potential biological activities and fully characterizes the molecular mechanisms for their formation through the key 32CA reaction step.
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Affiliation(s)
- Saeed Alshahrani
- Department of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia; (S.A.); (A.M.A.-M.); (A.S.A.); (M.A.)
| | - Abdullah Mohammed Al-Majid
- Department of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia; (S.A.); (A.M.A.-M.); (A.S.A.); (M.A.)
| | - Abdullah Saleh Alamary
- Department of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia; (S.A.); (A.M.A.-M.); (A.S.A.); (M.A.)
| | - Mohamed Ali
- Department of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia; (S.A.); (A.M.A.-M.); (A.S.A.); (M.A.)
| | - Mezna Saleh Altowyan
- Department of Chemistry, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia;
| | - Mar Ríos-Gutiérrez
- Department of Organic Chemistry, University of Valencia, Dr. Moliner 50, 46100 Burjassot, Valencia, Spain;
| | - Sammer Yousuf
- H.E.J. Research Institute of Chemistry, International Centre for Chemical and Biological Sciences, University of Karachi, Karachi 75270, Pakistan;
| | - Assem Barakat
- Department of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia; (S.A.); (A.M.A.-M.); (A.S.A.); (M.A.)
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Hussein HA, Fadhil GF. Theoretical Investigation of para Amino-Dichloro Chalcone Isomers. Part II: A DFT Structure-Stability Study of the FMO and NLO Properties. ACS OMEGA 2023; 8:4937-4953. [PMID: 36777615 PMCID: PMC9909800 DOI: 10.1021/acsomega.2c07148] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2022] [Accepted: 01/13/2023] [Indexed: 05/25/2023]
Abstract
The density functional theory (DFT) method using the functional hybrid (B3LYP) and 6-311G(d,p) basis set was utilized for the geometry optimization with dispersion correction, procedure (GO + DC), for the E and Z chalcone isomers -1-(4-aminophenyl)- 3-(i,j-dichlorophenyl)prop-2-en-1-one, where (i) and (j) represent the positions of the two chlorine atoms [(2,3), (2,4),(2,5),(2,6),(3,4), and (3,5)] abbreviated (i,j)-chalcone, and 4-(x,y-dichloro-8aH-chromen-2-yl)aniline, where (x = 5,6 and y = 6,7,8,8a) abbreviated (x,y)-chromen isomers. The calculations revealed that E chalcones are the most stable and the 4-(x,y-dichloro-8aH-chromen-2-yl) aniline isomers are the least stable. The (3,5) chalcones were the most stable in both E and Z chalcone series. However, the 4-(5,8a-dichloro-8aH-chromen-2-yl) aniline is the most stable in the series. The isomer stability order is the same as in Part 1, in which the geometry optimization calculation was followed by the dispersion correction single point energy calculation (GO/SPDC) procedure. The procedures (GO + DC) and (GO/SPDC) were used to calculate energies of the highest occupied molecular orbital (HOMO) and lowest-unoccupied molecular orbital (LUMO) and related properties. The order of the HOMO-LUMO energy gap (ΔE gap) was chromens
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Affiliation(s)
- Haval A. Hussein
- Department of Chemistry,
College of Science, University of Duhok, Zakho Street 38, 1006AJDuhok, Kurdistan Region, Iraq
| | - Ghazwan F. Fadhil
- Department of Chemistry,
College of Science, University of Duhok, Zakho Street 38, 1006AJDuhok, Kurdistan Region, Iraq
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Murugavel S, Vasudevan P, Chandrasekaran R, Archana V, Ponnuswany A. Synthesis, crystal structure elucidation, DFT analysis, drug-likeness and ADMET evaluation and molecular docking studies of triazole derivatives: Binary inhibition of spike protein and ACE2 receptor protein of COVID-19. J CHIN CHEM SOC-TAIP 2022; 69:884-900. [PMID: 35941959 PMCID: PMC9347919 DOI: 10.1002/jccs.202200140] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 04/13/2022] [Accepted: 05/01/2022] [Indexed: 12/13/2022]
Abstract
The recent incidence of terrible acute respiratory syndrome coronavirus 2 (SARS CoV-2) has presently experienced some noteworthy mutations since its discovery in 2019 in Wuhan, China. The present research work focuses on the synthesis of three triazole derivatives (BMTPP, BMTTP, and BMTIP) and their inhibition activities against SARS-Cov-2 spike and ACE2 receptor proteins. The crystal structure for BMTTP was determined by the SCXRD method and optimized geometrical parameters for the three triazole derivatives were obtained by DFT calculations. HOMO-LUMO, Global reactive descriptors [GRD], and Molecular electrostatic potential (MEP) investigations exposed that all three compounds have biological properties. The drug-likeness ability of the synthesized compounds was examined using Molinspiration and a pre-ADMET online Server. Further, to explore the binding nature of three synthesized compounds with SARS-Cov-2 spike proteins/ACE2 receptor molecular docking studies were executed. The outcomes we obtained from molecular docking simulation studies suggest that the synthesized triazole derivatives may be well utilized as curing medicines against COVID-19. Ultimately, animal tests and precise clinical tests are required to prove the potent nature of these compounds against COVID-19. Finally, the present outcomes must be proved to utilize in-vitro and in-vivo antiviral methods.
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Affiliation(s)
- Saminathan Murugavel
- Department of PhysicsThanthai Periyar Government Institute of TechnologyVelloreTamil NaduIndia
| | - Perumal Vasudevan
- Department of PhysicsThanthai Periyar Government Institute of TechnologyVelloreTamil NaduIndia
| | | | - Vellingiri Archana
- Department of ChemistrySchool of Physical Sciences and Computational Sciences, Avinashilingam Institute for Home Science and Higher Education for WomenCoimbatoreTamil NaduIndia
| | - Alagusundaram Ponnuswany
- Department of Organic chemistrySchool of chemistry, Madurai Kamaraj UniversityMaduraiTamil NaduIndia
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Boudriga S, Haddad S, Murugaiyah V, Askri M, Knorr M, Strohmann C, Golz C. Three-Component Access to Functionalized Spiropyrrolidine Heterocyclic Scaffolds and Their Cholinesterase Inhibitory Activity. Molecules 2020; 25:E1963. [PMID: 32340203 PMCID: PMC7221748 DOI: 10.3390/molecules25081963] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 04/17/2020] [Accepted: 04/21/2020] [Indexed: 02/06/2023] Open
Abstract
A novel one-pot [3+2]-cycloaddition reaction of (E)-3-arylidene-1-phenyl-succinimides, cyclic 1,2-diketones (isatin, 5-chloro-isatin and acenaphtenequinone), and diverse α-aminoacids such as 2-phenylglycine or sarcosine is reported. The reaction provides succinimide-substituted dispiropyrrolidine derivatives with high regio- and diastereoselectivities under mild reaction conditions. The stereochemistry of these N-heterocycles has been confirmed by four X-ray diffraction studies. Several synthetized compounds show higher inhibition on acetylcholinesterase (AChE) than butyrylcholinesterase (BChE). Of the 17 synthesized compounds tested, five exhibit good AChE inhibition with IC50 of 11.42 to 22.21 µM. A molecular docking study has also been undertaken for compound 4n possessing the most potent AChE inhibitory activity, disclosing its binding to the peripheral anionic site of AChE enzymes.
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Affiliation(s)
- Sarra Boudriga
- Department of Chemistry, Laboratory of Heterocyclic Chemistry Natural Product and Reactivity/CHPNR, Faculty of Science of Monastir, Monastir 5000, Tunisia;
| | - Saoussen Haddad
- Department of Chemistry, Laboratory of Heterocyclic Chemistry Natural Product and Reactivity/CHPNR, Faculty of Science of Monastir, Monastir 5000, Tunisia;
| | - Vikneswaran Murugaiyah
- Discipline of Pharmacology, School of Pharmaceutical Sciences, Universiti Sains Malaysia, USM 11800, Penang, Malaysia;
| | - Moheddine Askri
- Department of Chemistry, Laboratory of Heterocyclic Chemistry Natural Product and Reactivity/CHPNR, Faculty of Science of Monastir, Monastir 5000, Tunisia;
| | - Michael Knorr
- Institut UTINAM-UMR CNRS 6213, Université Bourgogne Franche-Comté, 16 Route de Gray, 25030 Besançon, France
| | - Carsten Strohmann
- Technische Universität Dortmund, Anorganische Chemie Otto-Hahn-Straße 6, 44221 Dortmund, Germany; (C.S.); (C.G.)
| | - Christopher Golz
- Technische Universität Dortmund, Anorganische Chemie Otto-Hahn-Straße 6, 44221 Dortmund, Germany; (C.S.); (C.G.)
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Ravikumar C, Murugavel S. Structural correlation and computational quantum chemical explorations of two 1,2,3-triazolyl-methoxypyridine derivatives as CYP51 antifungal inhibitors. Struct Chem 2019. [DOI: 10.1007/s11224-019-01329-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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