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Camarda D, Massa E, Guidetti R, Lisi O. A new, simplified, drying protocol to prepare tardigrades for scanning electron microscopy. Microsc Res Tech 2024; 87:716-726. [PMID: 37983688 DOI: 10.1002/jemt.24460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Revised: 10/20/2023] [Accepted: 11/08/2023] [Indexed: 11/22/2023]
Abstract
A new protocol for preparation of tardigrades for scanning electron microscope (SEM) analysis is proposed. The more conventional protocols require various steps and a long time to obtain good drying of water bears, together with specific and uncommon instruments (i.e., critical point dryer) or highly volatile toxic compounds (i.e., hexametildisilazane). The new protocol can be performed using few and simple instruments and materials, all easily accessible, and produces a high yield in terms of dried animals in excellent condition for the observation of external morphological structures with SEM. The acquired data exhibit considerable promise, and the proposed methodology shows potential for application to other meiofaunal groups, including small arthropods, nematodes, and rotifers. RESEARCH HIGHLIGHTS: Cheap, safe, and fast new method for Tardigrada preparation for SEM. With the new protocol, the number of animals required for SEM studies is minimized. New protocol is potentially applicable to the study of other meiofaunal soft-bodied taxa.
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Affiliation(s)
- Daniele Camarda
- Department of Biological, Geological and Environmental Sciences, University of Catania, Catania, Italy
| | - Edoardo Massa
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - Roberto Guidetti
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - Oscar Lisi
- Department of Biological, Geological and Environmental Sciences, University of Catania, Catania, Italy
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Archidona-Yuste A, Clavero-Camacho I, Ruiz-Cuenca AN, Cantalapiedra-Navarrete C, Liebanas G, Castillo P, Palomares-Rius JE. The more we search, the more we find: discovering and expanding the biodiversity in the ring nematode genus Xenocriconemella De Grisse and Loof, 1965 (Nematoda: Criconematidae). ZOOLOGICAL LETTERS 2024; 10:8. [PMID: 38528566 DOI: 10.1186/s40851-024-00230-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Accepted: 02/21/2024] [Indexed: 03/27/2024]
Abstract
The ring nematode genus Xenocriconemella De Grisse and Loof, 1965 comprises only one nominal species, Xenocriconemella macrodora (Taylor, 1936) De Grisse and Loof, 1965. The initial objective of the present study was to investigate the morphological-morphometric and molecular diversity of 28 X. macrodora populations in the Iberian Peninsula associated with tree forests (mainly Quercus spp.). However, a detailed integrative taxonomic analysis (morphological-morphometric and molecular data) from each population and analysis of this data using principal component analysis (PCA) for morphometric data (including these 28 populations and other 25 X. macrodora populations around the world) and molecular and phylogenetic species delimitation methods revealed that X. macrodora forms a species complex. This species complex is composed by species that are morphometricly and morphologically similar, but clearly different at the molecular level. Three new species are described applying integrative taxonomy, namely as Xenocriconemella iberica sp. nov., Xenocriconemella paraiberica sp. nov. and Xenocriconemella pradense sp. nov. However, the molecular diversity of this species in USA and Italy confirmed that additional species are likely present in this species complex, and the diversity of this group may be higher than expected. The study of X. macrodora topotypes can clarify the position of this species using molecular markers under an integrative approach.
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Affiliation(s)
- A Archidona-Yuste
- Department of Crop Protection, Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avda. Menendez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004, Córdoba, Spain.
| | - I Clavero-Camacho
- Department of Crop Protection, Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avda. Menendez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004, Córdoba, Spain
| | - A N Ruiz-Cuenca
- Department of Crop Protection, Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avda. Menendez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004, Córdoba, Spain
- Department of Animal, Plant Biology and Ecology, University of Jaén, Campus Las Lagunillas, Jaén, Spain
| | - C Cantalapiedra-Navarrete
- Department of Crop Protection, Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avda. Menendez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004, Córdoba, Spain
| | - G Liebanas
- Department of Animal, Plant Biology and Ecology, University of Jaén, Campus Las Lagunillas, Jaén, Spain
| | - P Castillo
- Department of Crop Protection, Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avda. Menendez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004, Córdoba, Spain
| | - J E Palomares-Rius
- Department of Crop Protection, Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avda. Menendez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004, Córdoba, Spain
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Asgari M, Mohammadlou M, Eskandari A, Abolafia J, Peña-Santiago R. Description and molecular characterization of Trachactinolaimus persicus sp. n. from Iran (Nematoda, Dorylaimida, Actinolaimidae), with new insights into the taxonomy and evolutionary relationships of the genus. J Helminthol 2024; 98:e18. [PMID: 38347824 DOI: 10.1017/s0022149x24000075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2024]
Abstract
A new species of the free-living nematode genus Trachactinolaimus, collected in natural habitats of northern Iran, is described, including morphological and molecular (28S-rDNA) data. Trachactinolaimus persicus sp. n. is characterized by its 1.95-2.44 mm long body, lip region weakly offset by depression and 18-20 μm wide, odontostyle 25-27 μm long, neck 540-636 μm long, pharyngeal expansion occupying one-half of the total neck length, bipartite uterus 2.6-3.9 body diameters long, vulva (V = 49-53) pore-like, tail long and filiform in both sexes (174-223 μm, c = 10.0-13.4, c' = 5.9-7.0 in females, 165-196 μm, c = 10.7-13.8, c' = 4.6-5.8 in males), spicules 68-75 μm long, and 12-14 almost contiguous ventromedian supplements with hiatus. Molecular data supports the monophyly of the genus and the hypothesis that Dorylaimidae are the sister group of actinolaims. The taxonomy of Trachactinolaimus is updated, including diagnosis, list of species, key to their identification, and a compendium of their main morphometrics. Dominiactinolaimus is regarded as its junior synonym.
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Affiliation(s)
- M Asgari
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, Zanjan, Iran
| | - M Mohammadlou
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, Zanjan, Iran
| | - A Eskandari
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, Zanjan, Iran
| | - J Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología; Universidad de Jaén, Campus "Las Lagunillas" s/n, Edificio B3, Jaén, Spain
| | - R Peña-Santiago
- Departamento de Biología Animal, Biología Vegetal y Ecología; Universidad de Jaén, Campus "Las Lagunillas" s/n, Edificio B3, Jaén, Spain
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Robles MC, Abolafia J. Description of Acromoldavicus xerophilus n. sp. (Nematoda, Rhabditida, Elaphonematidae) from the southern Iberian Peninsula, including a key to species of the genus. J Helminthol 2024; 98:e14. [PMID: 38305043 DOI: 10.1017/s0022149x24000051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2024]
Abstract
A new species of the genus Acromoldavicus is described from coastal sand dunes and sandy soil in the southeast of the Iberian Peninsula. Acromoldavicus xerophilus n. sp. is characterized by its 557-700 μm body length, cuticle tessellated, lip region with three pairs of expanded lips bearing a large labial expansion, primary axils bearing guard processes with two different morphology, secondary axils lacking guard processes, stoma short and tubular with prostegostom bearing prominent rhabdia directed towards the stoma lumen, female reproductive system monodelphic-prodelphic, post-vulval sac 0.6-0.9 times body diameter, rectum very large, female tail short with biacute terminus and males unknown. The description, light micrographs, scanning electron microscope images, illustrations, and molecular analyses are provided. Molecular analyses (based on 18S and 28S rDNA) revealed its relationship with some species of the genera Cephalobus (18S tree), Nothacrobeles, Paracrobeles, and Spinocephalus (28S tree). Keys to species identification of this genus are also included.
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Affiliation(s)
- M-C Robles
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus "Las Lagunillas" s/n. 23071-Jaén, Spain
| | - J Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus "Las Lagunillas" s/n. 23071-Jaén, Spain
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Nguyen HT, Nguyen TD, Le TML, Trinh QP. Method for taking Scanning Electron Microscope photographs of nematodes and meiofauna with the support of a low-cost and easy-made container. Helminthologia 2023; 60:393-396. [PMID: 38222489 PMCID: PMC10787630 DOI: 10.2478/helm-2023-0041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Accepted: 10/06/2023] [Indexed: 01/16/2024] Open
Abstract
This paper presents a method for capturing Scanning Electron Microscope (SEM) photographs of small specimens, including nematodes, arthropods, small insects, and other meiofauna. Our method is tailored to handle nematode specimens mounted on permanent slides, an area with relatively limited documentation. Besides, the process of transferring such delicate specimens from one solution to another has historically posed numerous challenges. To address this issue, we introduce a low-cost and easy-made container designed specifically to facilitate the aforementioned procedure, with a particular focus on SEM photography. The newly introduced container offers a practical solution that enhances the efficiency and effectiveness of specimen handling, ultimately enabling high-quality SEM imaging. This method holds significant promise for researchers working in the field of micro-scopic organism analysis, providing a valuable tool for their investigations with minimum cost.
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Affiliation(s)
- H. T. Nguyen
- Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
- Graduate University of Science and Technology, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
| | - T. D. Nguyen
- Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
- Graduate University of Science and Technology, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
| | - T. M. L. Le
- Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
- Graduate University of Science and Technology, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
| | - Q. P. Trinh
- Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
- Graduate University of Science and Technology, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, 100000Hanoi, Vietnam
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Hosseinvand M, Eskandari A, Azizi K, Palomares-Rius JE, Castillo P, Abolafia J, Ghaderi R, Helder J, Qing X. Integrative taxonomy and phylogenetic relationships between representatives of genera within Merliniinae (Nematoda: Merliniidae), with new data on fourteen known and one unknown species. J Helminthol 2023; 97:e89. [PMID: 38032079 DOI: 10.1017/s0022149x23000640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2023]
Abstract
The application of integrative taxonomic approaches is useful to species delineation based on a combination of distinct types of characters, here morphological features and ribosomal DNA sequences. In this study, we surveyed ectoparasitic nematodes of the subfamily Merliniinae in cultivated and natural environments in Iran. Results of morphological and morphometrical studies, light and scanning electron microscopic observations, and molecular analyses allowed us the identification of fourteen known and one unknown species including representatives of the genera Amplimerlinius (five species), Geocenamus (one species), Merlinius (three species), Nagelus (two species), Paramerlinius (one species), Scutylenchus (two species), and Telomerlinius (one species). The unknown species, Scutylenchus sp., characterized by having 35-50 incisures at mid-body; lateral field with 6 longitudinal incisures; lip region slightly offset by a constriction, flattened at front end; bearing 5-7 annuli; cephalic framework not refractive; stylet robust, 18.3-27 μm long; post anal intestinal sac absent; tail elongate conical, dorsally convex, with 24 (19-28) annuli in ventral side, ending to a smooth terminus and males common; spicules 24.5-31 μm long. The phylogenetic analyses were carried out using molecular data from nuclear ribosomal DNA (rDNA) genes viz. D2-D3 expansion segments of the large ribosomal subunit (28S rRNA), partial small ribosomal subunit (18S rRNA), and internal transcribed spacer (ITS). The molecular variability of D2-D3 expansion segments of the 28S rRNA and partial 18S rRNA was low in this family in comparison to the ITS region, which could be a more helpful molecular marker in species and genus identification.
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Affiliation(s)
- M Hosseinvand
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
| | - A Eskandari
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
| | - K Azizi
- Department of Plant Protection, Lorestan University, 68151-44316, Khoramabad, Iran
| | - J E Palomares-Rius
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004 Córdoba, Campus de Excelencia Internacional Agroalimentario, ceiA3, Spain
| | - P Castillo
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004 Córdoba, Campus de Excelencia Internacional Agroalimentario, ceiA3, Spain
| | - J Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus 'Las Lagunillas' s/n, Edificio B3, 23071Jaén, Spain
| | - R Ghaderi
- Department of Plant Protection, School of Agriculture, Shiraz University, 71441-65186, Shiraz, Iran
| | - J Helder
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands
| | - X Qing
- Department of Plant Protection, Nanjing Agricultural University, Nanjing, China
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Bhat AH, Machado RAR, Abolafia J, Ruiz-Cuenca AN, Askary TH, Ameen F, Dass WM. Taxonomic and molecular characterization of a new entomopathogenic nematode species, Heterorhabditis casmirica n. sp., and whole genome sequencing of its associated bacterial symbiont. Parasit Vectors 2023; 16:383. [PMID: 37880744 PMCID: PMC10598981 DOI: 10.1186/s13071-023-05990-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Accepted: 09/29/2023] [Indexed: 10/27/2023] Open
Abstract
BACKGROUND Nematodes of the genus Heterorhabditis are important biocontrol agents as they form a lethal combination with their symbiotic Photorhabdus bacteria against agricultural insect pests. This study describes a new species of Heterorhabditis. METHODS Six Heterorhabditis nematode populations were recovered from agricultural soils in Jammu and Kashmir, India. An initial examination using mitochondrial and nuclear genes showed that they belong to a new species. To describe this new species, a variety of analyses were conducted, including reconstructing phylogenetic relationships based on multiple genes, characterizing the nematodes at the morphological and morphometric levels, performing self-crossing and cross-hybridization experiments, and isolating and characterizing their symbiotic bacteria. RESULTS The newly discovered species, Heterorhabditis casmirica n. sp., shares 94% mitochondrial cytochrome C oxidase subunit I gene (COI) sequence identity with Heterorhabditis bacteriophora and Heterorhabditis ruandica, and 93% with Heterorhabditis zacatecana. Morphologically, it differs from H. bacteriophora in its infective juvenile phasmids (present vs. inconspicuous) and bacterial pouch visibility in the ventricular portion of the intestine (invisible vs. visible); genital papilla 1 (GP1) position (at manubrium level vs. more anterior), and in its b ratio (body length/neck length), c ratio (tail length/bulb width), and D% [(excretory pore/neck length) × 100]. Other morphological differences include anterior end to the nerve ring distance (77-100 vs. 121-130 μm), V% [(anterior end of vulva/body length) × 100] (46-57 vs. 41-47) in hermaphroditic females; rectum size (slightly longer than the anal body diameter vs. about three times longer), phasmids (smaller vs. inconspicuous), body length (0.13-2.0 vs. 0.32-0.39 mm), body diameter (73-150 vs. 160-220 μm), anterior end to the excretory pore distance (135-157 vs. 174-214 μm), and demanian ratios in amphimictic females. Morphological differences with H. ruandica and H. zacatecana were also observed. Furthermore, H. casmirica n. sp. did not mate or produce fertile progeny with other Heterorhabditis nematodes reported from India. It was also discovered that H. casmirica n. sp. is associated with Photorhabdus luminescence subsp. clarkei symbiotic bacteria. CONCLUSIONS The discovery of H. casmirica n. sp. provides novel insights into the diversity and evolution of Heterorhabditis nematodes and their symbiotic bacteria. This new species adds to the catalog of entomopathogenic nematodes in India.
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Affiliation(s)
- Aashaq Hussain Bhat
- Department of Biosciences, University Center for Research and Development, Chandigarh University, Gharuan, Mohali, Punjab, 140413, India.
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Neuchâtel, 2000, Switzerland.
| | - Ricardo A R Machado
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Neuchâtel, 2000, Switzerland
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus 'Las Lagunillas', Jaén, 23071, Spain
| | - Alba N Ruiz-Cuenca
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus 'Las Lagunillas', Jaén, 23071, Spain
| | - Tarique Hassan Askary
- Division of Entomology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Wadura Campus, Sopore, 193201, Jammu and Kashmir, India
| | - Fuad Ameen
- Department of Botany and Microbiology, College of Science, King Saud University, 11451, Riyadh, Saudi Arabia
| | - Wasim Muzamil Dass
- Department of Zoology, University of Kashmir, Srinagar, 190006, Jammu and Kashmir, India
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Peña-Santiago R, Abolafia J. General morphology, taxonomy and phylogeny of the genus Metaxonchium Coomans & Nair, 1975 (Nematoda: Dorylaimida: Belondiridae). ZOOL ANZ 2023. [DOI: 10.1016/j.jcz.2023.03.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023]
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Archidona-Yuste A, Palomares-Rius JE, Clavero-Camacho I, Cantalapiedra-Navarrete C, Liébanas G, Castillo P. A Blind-Identification Test on Criconema annuliferum (de Man, 1921) Micoletzky, 1925 Species Complex Corroborate the Hyper-Cryptic Species Diversity Using Integrative Taxonomy. PLANTS (BASEL, SWITZERLAND) 2023; 12:1044. [PMID: 36903905 PMCID: PMC10005498 DOI: 10.3390/plants12051044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 02/21/2023] [Accepted: 02/22/2023] [Indexed: 06/18/2023]
Abstract
Ring nematodes are obligate ectoparasites on crops and natural herbaceous and woody plants, and some species are of economic importance and cause damage to roots of several crops. Recent integrative taxonomical analyses recognized the existence of two cryptic species within the Criconema annuliferum morphotype in Spain. In this study, we corroborated that morphometric, morphological and a multi-locus analysis (including the ribosomal markers D2-D3 expansion segments of 28S rRNA, ITS rRNA, 18S RNA, and the mitochondrial DNA cytochrome oxidase I gene) identified a new lineage clearly separated from C. annuliferum, C. paraannuliferum and C. plesioannuliferum. The new lineage was described herein as Criconema pseudoannuliferum sp. nov., confirming that C. annuliferum species complex species complex comprises a hyper-cryptic species complex. This research analysed soil samples from the rhizosphere of maritime pine (Pinus pinaster Ait.) forests in Bermeja-Crestellina Mountain, located at the western part of Málaga province, southern Spain. The integrative taxonomical analyses revealed the occurrence of a new cryptic species identified using females, males and juveniles with detailed morphology, morphometry and molecular markers, described herein as Criconema pseudoannuliferum sp. nov. All molecular markers (D2-D3, ITS, 18S and COI) were obtained from the same individual that was also used for morphological and morphometric analyses. This research demonstrated the hidden diversity within the C. annuliferum species complex species complex can reach to four lineages under ribosomal and mitochondrial gene markers for one morphospecies group, which includes four species, viz. C. annuliferum, C. paraannuliferum, C. plesioannuliferum, and C. pseudoannuliferum sp. nov. Criconema pseudoannuliferum sp. nov. was detected in moderate soil density in two maritime pine forests (5 and 25 nematodes/500 cm3 of soil) suggesting that does not cause damage to maritime pine.
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Affiliation(s)
- Antonio Archidona-Yuste
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
| | - Juan Emilio Palomares-Rius
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
| | - Ilenia Clavero-Camacho
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
| | - Carolina Cantalapiedra-Navarrete
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
| | - Gracia Liébanas
- Department of Animal Biology, Plant Biology and Ecology, University of Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 Jaén, Spain
| | - Pablo Castillo
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
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Mahboubi Z, Keramat M, Pourjam E, Reza Atighi M, Clavero-Camacho I, Abolafia J, Castillo P, Pedram M. Morphological and Molecular Characterization of Ottolenchus isfahanicus n. sp. (Tylenchomorpha: Tylenchoidea) from Rhizosphere of Gramineous Plants in Isfahan Province, Iran. J Nematol 2023; 55:20230011. [PMID: 37143486 PMCID: PMC10152461 DOI: 10.2478/jofnem-2023-0011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Indexed: 05/06/2023] Open
Abstract
A new species from the family Tylenchidae was recovered in the grasslands of Isfahan province, Iran, and is herein described based on morphological and molecular data. Ottolenchus isfahanicus n. sp. is mainly characterized by having a faintly annulated cuticle; elongated, slightly sigmoid amphidial apertures developed metacorpus with distinct valve under LM; vulva located at 69.472.3% of body length; large spermatheca about 2.75 times of corresponding body width; and elongated conoid tail with broadly rounded tip. SEM observations showed that the lip region is smooth; the amphidial apertures are elongated, slightly sigmoid slits; and the lateral field is a simple band. It is further characterized by 477-to-515-μm-long females with delicate 5.7-to-6.9-μm-long stylets with small, slightly posteriorly sloping knobs, as well as functional males, in the population. The new species closely resembles O. facultativus, but is separated from it based on morphological and molecular data. It was further morphologically compared with O. discrepans, O. fungivorus, and O. sinipersici. The phylogenetic relationships of the new species with other relevant genera and species were reconstructed using near-full-length sequences of small subunit and D2-D3 expansion segments of large subunit (SSU and LSU D2-D3). In the inferred SSU phylogeny, the newly generated sequence of Ottolenchus isfahanicus n. sp. formed a clade with two sequences of O. sinipersici and sequences assigned to O. facultativus and O. fungivorus. In the inferred LSU phylogeny, the three newly generated sequences of the new species and LSU sequences of O. sinipersici and O. discrepans formed a clade.
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Affiliation(s)
- Zeinab Mahboubi
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Mojtaba Keramat
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Ebrahim Pourjam
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Mohammad Reza Atighi
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Ilenia Clavero-Camacho
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004, Córdoba, Spain
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus Las Lagunillas, s/n, 23071, Jaén, Spain
| | - Pablo Castillo
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004, Córdoba, Spain
| | - Majid Pedram
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
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Monemi S, Atighi MR, Abolafia J, Castillo P, Pedram M. Morphological and Molecular Characterization of Filenchus multistriatus n. sp. (Tylenchomorpha: Tylenchidae) and Data on a Known Species of the Genus from Bushehr Province, Southern Iran. J Nematol 2023; 55:20230008. [PMID: 37206952 PMCID: PMC10191216 DOI: 10.2478/jofnem-2023-0008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Indexed: 05/21/2023] Open
Abstract
During a nematological survey in southern Iran, a population belonging to the family Tylenchidae was recovered from a tomato field in Bushehr province. The recovered population belongs to the genus Filenchus, was described and illustrated herein as F. multistriatus n. sp. It is mainly characterized by having a wide and low annulated lip region continuous with adjacent body; amphidial openings confined to the labial plate; four lines in lateral fields forming three bands, with the two outer bands broken by transverse, and the inner one broken by both transverse and longitudinal lines; and median bulb oval with visible valve and elongate-conoid tail uniformly and gradually narrowing toward the distal region, ending in a widely rounded tip. Its morphological and morphometric differences with three closely similar species were discussed. The phylogenetic relationships of the new species with other relevant genera and species were reconstructed using partial sequences of small, and large subunit ribosomal DNA (SSU and LSU rDNA) sequences. Morphometric and morphological data were also provided for an Iranian population of F. sandneri recovered from Bushehr province. Both populations were characterised using SEM data.
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Affiliation(s)
- Somayeh Monemi
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Mohammad Reza Atighi
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus Las Lagunillas, s/n, 23071, Jaén, Spain
| | - Pablo Castillo
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004, Córdoba, Spain
| | - Majid Pedram
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
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Bhat AH, Machado RAR, Abolafia J, Askary TH, Půža V, Ruiz-Cuenca AN, Rana A, Sayed S, Al-Shuraym LA. Multigene Sequence-Based and Phenotypic Characterization Reveals the Occurrence of a Novel Entomopathogenic Nematode Species, Steinernema anantnagense n. sp. J Nematol 2023; 55:20230029. [PMID: 37455851 PMCID: PMC10341053 DOI: 10.2478/jofnem-2023-0029] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Indexed: 07/18/2023] Open
Abstract
Three entomopathogenic nematode populations were isolated from agricultural fields in the Anantnag district of Jammu and Kashmir (India). Sequences of multiple gene regions and phenotypic features show that they are conspecific and represent a novel species. Molecular and morphological features provided evidence for placing the new species into the "Kushidai" clade. Within this clade, analysis of sequence data of the internal transcribed spacer (ITS) gene, the D2D3 region of the 28S rRNA gene, the mitochondrial cytochrome oxidase I (mtCOI) gene, and the mitochondrial 12S (mt12S) gene depicted the novel species as a distinctive entity closely related to Steinernema akhursti, S. kushidai, and S. populi. Phylogenetic analyses also show that the new species is a sister species to S. akhursti, and these two species are closely related to S. kushidai and S. populi. Additionally, the new species does not mate or produce fertile progeny with any of the closely related species, reinforcing its uniqueness from a biological species concept standpoint. The new species is further characterized by the third-stage infective juveniles with almost straight bodies (0.7-0.8 mm length), poorly developed stoma and pharynx, and conoid-elongate tail (49-66 µm) with hyaline posterior part. Adult females are characterized by short and conoid tails bearing a short mucron in the first generation and long conoid tails with thin mucron in the second generation. Adult males have ventrally curved spicules in both generations. Moreover, the first-generation male has rounded manubrium, fusiform gubernaculum, conoid and slightly ventrally curved tails with minute mucron, and the second generation has rhomboid manubrium anteriorly ventrad bent, and tails with long and robust mucron. The morphological, morphometrical, molecular, and phylogenetic analyses support the new species status of this nematode, which is hereby described as Steinernema anantnagense n. sp. The bacterial symbiont associated with S. anantnagense n. sp. represents a novel species, closely related to Xenorhabdus japonica. These findings shed light on the diversity of entomopathogenic nematodes and their symbiotic bacteria, providing valuable information for future studies in this field.
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Affiliation(s)
- Aashaq Hussain Bhat
- Department of Biosciences and University Center for Research and Development, Chandigarh University, Gharuan, Mohali, Punjab, 140413, India
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Neuchâtel, Switzerland
| | - Ricardo A. R. Machado
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Neuchâtel, Switzerland
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus “Las Lagunillas”, Jaén, Spain
| | - Tarique Hassan Askary
- Division of Entomology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Wadura Campus, Jammu and Kashmir, India
| | - Vladimír Půža
- Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 37005České Budějovice, Czech Republic
| | - Alba Nazaret Ruiz-Cuenca
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus “Las Lagunillas”, Jaén, Spain
| | - Aasha Rana
- Department of Zoology, Faculty of Basic and Applied Sciences, Madhav University, Pindwara (Sirohi), Rajasthan, 307026, India
| | - Samy Sayed
- Department of Economic Entomology and Pesticides, Faculty of Agriculture, Cairo University, 12613, Giza, Egypt
| | - Laila A. Al-Shuraym
- Department of Biology, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, Riyadh11671, Saudi Arabia
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Morphological and molecular characterization of Metaxonchium magnum sp. n. from Iran (Nematoda, Dorylaimida, Belondiridae), with new insights into the phylogeny of the genus. J Helminthol 2023; 97:e14. [PMID: 36718640 DOI: 10.1017/s0022149x22000943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
A new species of the genus Metaxonchium is described from a natural habitat in Iran. Metaxonchium magnum sp. n. is characterized by its 3.62-4.65 mm long body, lip region cap-like and offset by constriction and 13-16 μm wide, odontostyle fusiform and 14-17 μm long, neck 1016-1359 μm long, both parts of the pharynx separated by a short isthmus-like narrowing, pharyngeal expansion occupying 74.2 (73-77)% of total neck length in females and 70.4 (66-72)% in males, female genital system mono-opistho-ovarian, didelphic, anterior genital branch a large uterine sac with a small terminal mass occupying 7-14% of body length, posterior uterus long and tripartite with a Z-like differentiation, V = 50-52, caudal region short and rounded (24-41 μm, c = 99-161, c' = 0.5-0.7), spicules 90-105 μm long and 10-13 spaced ventromedian supplements with hiatus. Analysis of D2-D3 28S rDNA sequences of the new species suggests that Metaxonchium might not be a monophyletic taxon, a matter that should be confirmed after future research.
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Bhat AH, Loulou A, Abolafia J, Machado RA, Kallel S. Comparative morphological and molecular analyses of Acrobeloides bodenheimeri and A. tricornis Cobb, 1924 (Rhabditida, Cephalobidae) from Tunisia. NEMATOLOGY 2022. [DOI: 10.1163/15685411-bja10215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Summary
Four populations of Acrobeloides nematodes were isolated from Tunisian soils. Based on morphological and morphometric data, two populations, TC9 and HWO, were identified as A. tricornis and the other two, TC7 and K18g, as A. bodenheimeri. Acrobeloides tricornis is distinguished from its closely related species by its high labial probolae with arcuate termini, inconspicuous post-uterine sac, and five lateral incisures, while A. bodenheimeri is distinguished from other acrobeloids by having a low and rounded labial probolae, distinct post-uterine sac, five lateral incisures, and vulva frequently with vaginal plug. The A. tricornis and A. bodenheimeri reported in this study are distinguished by the shape of labial probolae (high with acute distal part vs low and rounded), post-uterine sac (inconspicuous vs distinct), position of the reproductive system with respect to the intestine (sinistral vs dextral), vulva with vaginal plug (present vs absent) and some morphometric characters (such as body length). Further, these species were also molecularly characterised using the sequences of the D2-D3 region of the 28S rRNA gene, the 18S rRNA gene, the ITS rRNA gene, and of the mitochondrial cytochrome c oxidase subunit I (mtCO1) gene. Phylogenetic trees using ribosomal RNA gene sequences clearly separate species of the ‘Maximus’ group, but these sequences appear to be identical in several other Acrobeloides species, and thus are unlikely to be useful as molecular markers for species-level molecular identification in the genus Acrobeloides. The mtCO1 gene sequences of two A. tricornis populations differ in 58 and 64 nucleotide bases from A. varius and A. nanus, respectively, indicating that the mtCO1 gene sequences have greater phylogenetic resolving power than nuclear rRNA gene sequences, and that this gene marker can differentiate closely related species in the genus Acrobeloides.
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Affiliation(s)
- Aashaq Hussain Bhat
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Neuchâtel, Switzerland
| | - Ameni Loulou
- Laboratory of Bio-aggressor and Integrated Protection in Agriculture, Department of Plant Health and Environment, National Agronomic Institute of Tunisia, University of Carthage, Tunis, Tunisia
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’, Jaén, Spain
| | - Ricardo A.R. Machado
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Neuchâtel, Switzerland
| | - Sadreddine Kallel
- Laboratory of Bio-aggressor and Integrated Protection in Agriculture, Department of Plant Health and Environment, National Agronomic Institute of Tunisia, University of Carthage, Tunis, Tunisia
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15
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Peña-Santiago R, Cortés N, García-Ruiz M, Abolafia J. Morphological and molecular characterisation of Talanema ibericum sp. n. (Dorylaimida, Qudsianematidae) from southern Iberian Peninsula. NEMATOLOGY 2022. [DOI: 10.1163/15685411-bja10214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Summary
A new species of the genus Talanema, T. ibericum sp. n., collected in natural areas of southeastern Iberian Peninsula, is characterised, including morphological description, line, LM and SEM illustrations, and molecular (18S, D2-D3 28S rDNA sequences) study. The new species is distinguished by its 1.27-1.59 mm long body, lip region offset by constriction and 14-16.5 μm wide with perioral liplets, odontostyle 16.5-19.5 μm long, neck 285-359 μm long, pharyngeal expansion occupying 42-48% of the total neck length, uterus tripartite and 147-228 μm long or 2.6-4.0 body diam., vulva transverse (V = 53-59), presence of cuticular irregularities at both sides of vulva, female tail conical with a dorsal concavity (27-40 μm, c = 36-54, c′ = 1.0-1.3), male tail short and rounded conoid (24 μm, c = 66, c′ = 0.8), spicules 58 μm long, and 17 almost contiguous ventromedian supplements with hiatus. Morphological and molecular data reveal that the new species is similar to (but easily separable from) T. baqrii, with which it is compared. Present results support the monophyly of the genus Talanema.
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Affiliation(s)
- Reyes Peña-Santiago
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, 23071 Jaén, Spain
| | - Nazareth Cortés
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, 23071 Jaén, Spain
| | - Miriam García-Ruiz
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, 23071 Jaén, Spain
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, 23071 Jaén, Spain
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16
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Yadav K, Bhat AH, Abolafia J, Machado RA, Wani SM, Chaubey AK. Redescription and molecular characterisation of Panagrolaimus labiatus (Kreis, 1929) Andrássy, 1960 (Rhabditida, Panagrolaimidae) from India and proposal of P. burdwanensis Chaturvedi & Khera, 1979 as a junior synonym of P. labiatus. NEMATOLOGY 2022. [DOI: 10.1163/15685411-bja10211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Summary
Two populations of bacterial-feeding nematodes belonging to the genus Panagrolaimus were recovered from infected slugs collected from gardens, agricultural areas and nurseries of the Baghpat district (India). Initial morphological characterisation of these populations show that they resemble Panagrolaimus labiatus from China and Bulgaria, P. burdwanensis from India, and P. cf. labiatus from Iran. To clarify taxonomical affiliations, we morphologically compared these two new populations to those recovered from China, Bulgaria, India and Iran. In addition, we sequenced several taxonomically relevant genes and used them to reconstruct phylogenetic relationships. Our results show that the two Indian populations do not significantly differ morphologically from the specimens used to describe the species P. labiatus, and also do not differ among them. We only observed small variations in the size of males and females. In addition, morphologically, the nematodes used to describe P. burdwanensis are very similar to the nematodes used to describe P. labiatus and to the two populations described in this study. Therefore, we propose P. burdwanensis as a junior synonym of P. labiatus and that the two populations recovered from India belong to the P. labiatus species. Phylogenetic analyses using the nucleotide sequences of the internal transcribed spacer (ITS), 18S and 28S rRNA gene sequences support our morphological conclusions. Our study therefore provides a detailed morphological description and molecular marker 18S and 28S gene sequences that can support future taxonomical studies of this species and highlights the importance of using both molecular and morphological data for the proper description of soil microfauna.
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Affiliation(s)
- Kajol Yadav
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, 250004, Uttar Pradesh, India
| | - Aashaq Hussain Bhat
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Rue Emile-Argand 11, 2000, Neuchâtel, Switzerland
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 Jaén, Spain
| | - Ricardo A.R. Machado
- Experimental Biology Research Group, Institute of Biology, Faculty of Sciences, University of Neuchâtel, Rue Emile-Argand 11, 2000, Neuchâtel, Switzerland
| | - Shaheen Majeed Wani
- Nematode Biodiversity and Genomics Research Laboratory, Baba Ghulam Shah Badshah University Rajouri, 185234, Jammu and Kashmir, India
| | - Ashok Kumar Chaubey
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, 250004, Uttar Pradesh, India
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Observation on the Rotylenchus brevicaudatus Colbran, 1962 from Botswana, with the first SEM of the species. Biologia (Bratisl) 2022. [DOI: 10.1007/s11756-022-01240-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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18
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Hosseinvand M, Eskandari A, Palomares-Rius JE, Castillo P, Abolafia J, Ghaderi R. Morphological and molecular characterisation of a new cryptic species of Criconemoides informis group, C. neoinformis n. sp., and C. persicus n. sp., with notes on C. avicenniae. NEMATOLOGY 2022. [DOI: 10.1163/15685411-bja10204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Summary
Criconemoides neoinformis n. sp., a cryptic species of C. informis group, and C. persicus n. sp. were recovered from the rhizosphere of pear and grass, in Zanjan and West Azerbaijan provinces, northwestern Iran, respectively. Criconemoides neoinformis n. sp. is characterised by 522-585 μm long females, having four separated pseudolips, anteriorly flattened lip region comprised of two annuli, 57-63 retrorse body annuli with smooth to slightly crenate margins, without anastomoses, 86.9-90.4 μm long stylet, having 6-10 annuli from vulva to posterior end and tail conical rounded with two, three or multilobed terminus and presence of males. Criconemoides persicus n. sp. could be characterised by flatly rounded lip region, having fused rectangular pseudolips, 515-615 μm body length, stylet 60-65 μm, body annuli 120-132 with smooth to slightly crenate margins, without anastomoses, 9-12 annuli from vulva to posterior end and tail conical rounded with two trilobed terminus. In inferred phylogenies, these two new species clustered with known Criconemoides species in 18S, 28S, ITS and COI trees. These species are clearly separated molecularly by all the studied markers. The use of molecular markers, mainly D2-D3 expansion segments of 28S rRNA, ITS region and COI, are very promising in the case of cryptic species found in this group of nematodes. We provided molecular markers (two sequences per marker) for these new species with morphological/morphometrical data using an integrative taxonomy approach for the unequivocal identification of these species.
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Affiliation(s)
- Manouchehr Hosseinvand
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791 Zanjan, Iran
| | - Ali Eskandari
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791 Zanjan, Iran
| | - Juan E. Palomares-Rius
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
| | - Pablo Castillo
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 Jaén, Spain
| | - Reza Ghaderi
- Department of Plant Protection, School of Agriculture, Shiraz University, 71441-65186 Shiraz, Iran
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Steinernema africanum n. sp. (Rhabditida, Steinernematidae), a New Entomopathogenic Nematode Species Isolated in the Republic of Rwanda. J Nematol 2022; 54:20220049. [DOI: 10.2478/jofnem-2022-0049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Indexed: 11/06/2022] Open
Abstract
Abstract
Alternatives to hazardous insecticides are urgently needed for an environmentally friendly and effective management of insect pests. One such option is the use of entomopathogenic nematodes (EPN). To increase the availability of EPN with potential for biocontrol, we surveyed agricultural soils in the Republic of Rwanda and collected two Steinernema isolates. Initial molecular characterization showed that they represent a new species, for which we propose the name S. africanum n. sp. To describe this new species, we reconstructed phylogenetic relationships, calculated sequence similarity scores, characterized the nematodes at the morphological level, conducted crossing experiments, and isolated and characterized their symbiotic bacteria. At the molecular level, S. africanum n. sp. is closely related to S. litorale and S. weiseri. At the morphological level, S. africanum n. sp. differs from closely related species by the position of the nerve ring and also because the stoma and pharynx region is longer. The first-generation males have ventrally curved spicules with lanceolate manubrium and fusiform gubernaculum and the second-generation males have rounded manubrium and anteriorly hook-like gubernaculum. Steinernema africanum n. sp. does not mate or produce fertile progeny with any of the closely related species.
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Clavero-Camacho I, Palomares-Rius JE, Cantalapiedra-Navarrete C, Castillo P, Liébanas G, Archidona-Yuste A. A Proposed New Species Complex within the Cosmopolitan Ring Nematode Criconema annuliferum (de Man, 1921) Micoletzky, 1925. PLANTS (BASEL, SWITZERLAND) 2022; 11:1977. [PMID: 35956456 PMCID: PMC9370717 DOI: 10.3390/plants11151977] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Revised: 07/25/2022] [Accepted: 07/26/2022] [Indexed: 06/15/2023]
Abstract
Ring nematodes are obligate ectoparasites on cultivated and wild herbaceous and woody plants, inhabiting many types of soil, but particularly sandy soils. This study explored the morphometrical and molecular diversity of ring nematodes resembling Criconema annuliferum in 222 soil samples from fruit crops in Spain, including almond, apricot, peach and plum, as well as populations from cultivated and wild olives, and common yew. Ring nematodes of the genus Criconema were detected in 12 samples from under Prunus spp. (5.5%), showing a low to moderate nematode soil densities in several localities from southeastern and northeastern Spain. The soil population densities of Criconema associated with Prunus spp. ranged from 1 nematode/500 cm3 of soil in apricot at Sástago (Zaragoza province) to 7950 and 42,491 nematodes/500 cm3 of soil in peach at Ricla and Calasparra (Murcia province), respectively. The integrative taxonomical analyses reveal the presence of two cryptic species identified using females, males (when available), and juveniles with detailed morphology, morphometry, and molecular markers (D2-D3, ITS, 18S, and COI), described herein as Criconema paraannuliferum sp. nov. and Criconema plesioannuliferum sp. nov. All molecular markers from each species were obtained from the same individuals, and these individuals were also used for morphological and morphometric analyses. Criconema paraannuliferum sp. nov. was found in a high soil density in two peach fields (7950 and 42,491 nematodes/500 cm3 of soil) showing the possibility of being pathogenic in some circumstances.
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Affiliation(s)
- Ilenia Clavero-Camacho
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain; (I.C.-C.); (J.E.P.-R.); (C.C.-N.); (P.C.)
| | - Juan Emilio Palomares-Rius
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain; (I.C.-C.); (J.E.P.-R.); (C.C.-N.); (P.C.)
| | - Carolina Cantalapiedra-Navarrete
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain; (I.C.-C.); (J.E.P.-R.); (C.C.-N.); (P.C.)
| | - Pablo Castillo
- Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Avenida Menéndez Pidal s/n, Campus de Excelencia Internacional Agroalimentario, ceiA3, 14004 Córdoba, Spain; (I.C.-C.); (J.E.P.-R.); (C.C.-N.); (P.C.)
| | - Gracia Liébanas
- Department of Animal Biology, Plant Biology and Ecology, University of Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 Jaén, Spain;
| | - Antonio Archidona-Yuste
- Andalusian Institute of Agricultural and Fisheries Research and Training (IFAPA), Centro Alameda del Obispo, 14004 Córdoba, Spain
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21
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Ruiz-Cuenca AN, Abolafia J. Description of Crustorhabditis dunicola n. sp. (Rhabditida, Mesorhabditidae) from coastal dunes in Spain, including the first SEM study of a representative of the genus. NEMATOLOGY 2022. [DOI: 10.1163/15685411-bja10164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Summary
One new species of the genus Crustorhabditis, C. dunicola n. sp., found in sand coastal dunes from Spain, is described. The new species is characterised by having body 0.60-0.88 mm long, lips separated and more acute toward oral opening, labial sensilla seta-like and cephalic sensilla papilliform, amphid openings oval, stoma tubular with glottoid apparatus bearing two long acute teeth per glottis, pharynx with metacorpus swollen, nerve ring surrounding the isthmus, excretory pore at level of the basal bulb, female reproductive system monodelphic-prodelphic with post-vulval uterine sac absent, vulva very posterior, rectum 1.2-1.9 times anal body width long, female tail elongate with short conoid proximal part and almost filiform distal part with thinner hyaline terminus, female phasmids located at level of the anus, bursa peloderan with velum anteriorly open and ten pairs of bursal papillae (GP1-GP2/GP3-GP6+ph+GP7-GP9), spicules 34-43 μm long and fused at two-thirds of their length, and gubernaculum 19-31 μm long. The genus Crustorhabditis is recorded for the first time from the Iberian Peninsula, with the first SEM study of a representative of the genus. Finally, keys to species identification of this genus are also included.
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Affiliation(s)
- Alba N. Ruiz-Cuenca
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071- Jaén, Spain
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071- Jaén, Spain
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22
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Redescription of Hoplolaimus indicus Sher, 1963 (Rhabditida, Hoplolaimidae) from Iran, including the first SEM study of the species. Biologia (Bratisl) 2022. [DOI: 10.1007/s11756-022-01104-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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Redescription of Diastolaimus grossus (Truskova & Eroshenko, 1977) Andrássy, 1984 (Rhabditida, Chambersiellidae) from Europe and comments on its phylogenetic position. J Helminthol 2022; 96:e31. [PMID: 35506345 DOI: 10.1017/s0022149x22000141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Two populations of the species Diastolaimus grossus have been obtained from bark of trees in Bosnia and Herzegovina and the Czech Republic. The species is described and characterized in detail using morphological techniques (light and electron scanning microscopy) and morphometrical (Gower General Similarity coefficient of morphological characters) and molecular analyses, including phylogenetic analysis of all related and already sequenced species of the family Chambersiellidae. Morphological and molecular analyses, based on 18S and 28S ribosomal DNA sequences, show that the family Chambersiellidae is polyphyletic, being the subfamily Chambersiellinae related with Cephalobomorpha and Tylenchomorpha, and the subfamily Macrolaiminae is located into Panagrolaimomorpha. The genus Diastolaimus, previously belonging to Macrolaiminae, is transferred to Chambersiellinae. Diastolaimus mexicanus is proposed as a junior synonym of D. grossus.
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Ruiz-Cuenca AN, Nguyen TAD, Abolafia J. Comparative study of three cryptic species of the genus Eucephalobus Steiner, 1936 with conoid-elongate tail and its relationship with the genus Pseudacrobeles Steiner, 1938 (Rhabditida, Cephalobidae). NEMATOLOGY 2022. [DOI: 10.1163/15685411-bja10158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Summary
Three cryptic species of the genus Eucephalobus, collected from coastal dunes of Spain and wet areas of California and Vietnam, are studied. The objective of this study is the differentiation of those species of the genus Eucephalobus with a long tail, which can be confused with each other and especially with Eucephalobus oxyuroides. These species are E. compsus, E. hooperi and E. panaxi. Furthermore, Pseudacrobeles unguicolis, which is also confused with these species, has been studied. This study provides detailed morphological and morphometrical characterisation for the three species of Eucephalobus, including light and scanning electron microscopy illustrations. Molecular characterisation of E. hooperi, E. mucronatus, E. striatus and Pseudacrobeles unguicolis is also presented.
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Affiliation(s)
- Alba N. Ruiz-Cuenca
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 – Jaén, Spain
| | - Thi Anh Duong Nguyen
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Hanoi, Vietnam
- Graduate University of Science and Technology, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet, Cau Giay, Hanoi, Vietnam
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 – Jaén, Spain
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Description of Boleodorus bushehrensis n. sp. (Rhabditida: Tylenchidae) from Southern Iran, and Observations on a Commonly Known Species. J Nematol 2022; 54:20220004. [PMID: 35860520 PMCID: PMC9260831 DOI: 10.2478/jofnem-2022-0004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2021] [Indexed: 11/20/2022] Open
Abstract
A new species of the genus Boleodorus, recovered from southern Iran, is described and illustrated based upon morphological and molecular data. B. bushehrensis n. sp. is mainly characterized by having a wide and low cephalic region (which is continuous with the adjacent body), the oral aperture in a depression in side view under a light microscope, four lines in the lateral field, weak metacorpus with a vestigial-to-invisible valve, and short (26–38 mm long) hooked tail with rounded tip. The females are 334–464 mm long and have a spherical spermatheca filled with spheroid sperm; males have 11.5- to 12.0-mm-long spicules and weakly developed bursa. The new species has an annulated low cephalic region, four large cephalic papillae, and small crescent-shaped amphidial openings when observed by scanning electron microscopy (SEM). Its morphological and morphometric differences with seven known species are discussed. The phylogenetic relationships of the new species with other relevant genera and species have been studied using partial sequences of small and large subunit ribosomal DNA (SSU and LSU rDNA). In both the SSU and LSU phylogenies, the sequences of B. bushehrensis n. sp. and other Boleodorus spp. formed a clade. A second species, B. thylactus, when studied under SEM, has a raised, smooth cephalic region, four large cephalic papillae, and oblique amphidial slits, with the oral opening in a depression.
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Schurkman J, Anesko K, Abolafia J, De Ley IT, Dillman AR. TARANTOBELUS JEFFDANIELSI N. SP. (PANAGROLAIMOMORPHA; PANAGROLAIMIDAE), A NEMATODE PARASITE OF TARANTULAS. J Parasitol 2022; 108:30-43. [PMID: 35038325 DOI: 10.1645/21-42] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
Multiple tarantula deaths for a wholesale breeder were reported in 2018. The breeder noticed white discharge in the oral cavities of the tarantulas. Upon inspection, it was discovered that the white discharge was a large group of nematodes intertwined inside the tarantula's oral cavity. We examined the nematodes and propose a new species, Tarantobelus jeffdanielsi n. sp., in the currently monotypic genus Tarantobelus based on a combination of morphological and morphometrical data and unique nuclear rDNA 28S and 18S sequences. Based on phylogenetic analyses, the previously described Tarantobelus arachnicida was relocated, along with T. jeffdanielsi, into the family Panagrolaimidae. We also provide evidence of the ability of T. jeffdanielsi to parasitize Galleria mellonella larvae and the tarantula Grammostola pulchra. The life span and fecundity of the new species were also assessed, resulting in an 11.2-d average life span, and a total fertility rate of 158 nematodes/adult.
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Affiliation(s)
- Jacob Schurkman
- Department of Nematology, Center for Infectious Disease and Vector Research, University of California, Riverside, Riverside, California, 92521
| | - Kyle Anesko
- Department of Nematology, Center for Infectious Disease and Vector Research, University of California, Riverside, Riverside, California, 92521
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus 'Las Lagunillas' s/n 23071-Jaén, Spain
| | - Irma Tandingan De Ley
- Department of Nematology, Center for Infectious Disease and Vector Research, University of California, Riverside, Riverside, California, 92521
| | - Adler R Dillman
- Department of Nematology, Center for Infectious Disease and Vector Research, University of California, Riverside, Riverside, California, 92521
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Bhat AH, Gautum S, Rana A, Chaubey AK, Abolafia J, Půža V. Morphological, Morphometrical and Molecular Characterization of Oscheius siddiqii Tabassum and Shahina, 2010 (Rhabditida, Rhabditidae) from India with Its Taxonomic Consequences for the Subgenus Oscheius Andrássy, 1976. BIOLOGY 2021; 10:biology10121239. [PMID: 34943154 PMCID: PMC8698764 DOI: 10.3390/biology10121239] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Revised: 11/22/2021] [Accepted: 11/24/2021] [Indexed: 11/16/2022]
Abstract
An insect parasitic nematode belonging to the genus Oscheius was recovered from the agricultural soils from the Hapur district in western Uttar Pradesh, India. Morphological studies on this species exhibited its high resemblance with two Pakistani species: Oscheius siddiqii and O. niazii. No molecular data are available for these taxa but, morphologically, both species do not differ significantly from our strains and each other. Hence, these nematodes can be considered conspecific, and the correct name for this taxon is O. siddiqii, the first described species. The phylogenetic analyses of the ITS-, 18S-, and the 28S rDNA sequences showed that O. siddiqii is a sister taxon to the group formed by Oscheius microvilli, O. myriophilus, O. safricanus, and several unidentified Oscheius species. Additionally, our analyses show that based on molecular and morphological data, the species Oscheius rugaoensis and O. microvilli cannot be distinguished from O. chongmingensis and O. myriophilus, respectively, and are thus considered junior synonyms of these taxa. Furthermore, the available data are not sufficient to evaluate the status of Oscheius basothovii and O. safricanus, which are, in consequence, considered species inquirendae. These findings highlight the necessity of the proper morphological and molecular characterisation of the described Oscheius species.
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Affiliation(s)
- Aashaq Hussain Bhat
- Department of Zoology, Government Degree College Uttersoo, Anantnag 192201, India;
- Experimental Biology Research Group, Institute of Biology, Faculty of Science, University of Neuchatel, Rue Emile-Argand 11, 2000 Neuchatel, Switzerland
| | - Swati Gautum
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut 250004, India; (S.G.); (A.R.); (A.K.C.)
| | - Aasha Rana
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut 250004, India; (S.G.); (A.R.); (A.K.C.)
| | - Ashok Kumar Chaubey
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut 250004, India; (S.G.); (A.R.); (A.K.C.)
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Avenida de Ben Saprut s/n, 23071 Jaén, Spain;
| | - Vladimír Půža
- Biology Centre, Institute of Entomology, Czech Academy of Sciences, Branišovská 31, 370 05 České Budějovice, Czech Republic
- Correspondence:
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Machado RA, Bhat AH, Abolafia J, Muller A, Bruno P, Fallet P, Arce CC, Turlings TC, Bernal JS, Kajuga J, Waweru B, Toepfer S. Multi-locus phylogenetic analyses uncover species boundaries and reveal the occurrence of two new entomopathogenic nematode species, Heterorhabditis ruandica n. sp. and Heterorhabditis zacatecana n. sp. J Nematol 2021; 53:e2021-89. [PMID: 34790901 PMCID: PMC8588743 DOI: 10.21307/jofnem-2021-089] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Indexed: 11/17/2022] Open
Abstract
Species of the nematode genus Heterorhabditis are important biological control agents against agricultural pests. The taxonomy of this group is still unclear as it currently relies on phylogenetic reconstructions based on a few genetic markers with little resolutive power, specially of closely related species. To fill this knowledge gap, we sequenced several phylogenetically relevant genetic loci and used them to reconstruct phylogenetic trees, to calculate sequence similarity scores, and to determine signatures of species- and population-specific genetic polymorphism. In addition, we revisited the current literature related to the description, synonymisation, and declaration as species inquirendae of Heterorhabditis species to compile taxonomically relevant morphological and morphometric characters, characterized new nematode isolates at the morphological and morphometrical level, and conducted self-crossing and cross-hybridization experiments. The results of this study show that the sequences of the mitochondrial cytochrome C oxidase subunit I (COI) gene provide better phylogenetic resolutive power than the sequences of nuclear rRNA genes and that this gene marker can phylogenetically resolve closely related species and even populations of the same species with high precision. Using this gene marker, we found two new species, Heterorhabditis ruandica n. sp. and Heterorhabditis zacatecana n. sp. A detailed characterization of these species at the morphological and morphometric levels and nematode reproduction assays revealed that the threshold for species delimitation in this genus, using COI sequences, is 97% to 98%. Our study illustrates the importance of rigorous morphological and morphometric characterization and multi-locus sequencing for the description of new species within the genus Heterorhabditis, serves to clarify the phylogenetic relationships of this important group of biological control agents, and can inform future species descriptions to advance our efforts towards developing more tools for sustainable and environmentally friendly agriculture.
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Affiliation(s)
- Ricardo A.R. Machado
- Experimental Biology Research Group. Institute of Biology. Faculty of Sciences. University of Neuchâtel. Rue Emile-Argand 11, 2000 Neuchâtel, Switzerland
| | - Aashaq Hussain Bhat
- Department of Zoology, Government Degree College. Billawar-184204, Kathua, Jammu, Jammu and Kashmir, India
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 Jaén, Spain
| | - Arthur Muller
- Experimental Biology Research Group. Institute of Biology. Faculty of Sciences. University of Neuchâtel. Rue Emile-Argand 11, 2000 Neuchâtel, Switzerland
| | - Pamela Bruno
- Laboratory of Fundamental and Applied Research in Chemical Ecology, Institute of Biology. Faculty of Sciences, University of Neuchâtel, 2000 Neuchâtel, Switzerland
| | - Patrick Fallet
- Laboratory of Fundamental and Applied Research in Chemical Ecology, Institute of Biology. Faculty of Sciences, University of Neuchâtel, 2000 Neuchâtel, Switzerland
| | - Carla C.M. Arce
- Laboratory of Fundamental and Applied Research in Chemical Ecology, Institute of Biology. Faculty of Sciences, University of Neuchâtel, 2000 Neuchâtel, Switzerland
| | - Ted C.J. Turlings
- Laboratory of Fundamental and Applied Research in Chemical Ecology, Institute of Biology. Faculty of Sciences, University of Neuchâtel, 2000 Neuchâtel, Switzerland
| | - Julio S. Bernal
- Department of Entomology, Texas A&M University, College Station, TX
| | - Joelle Kajuga
- Department of Crop Innovations & Technology Transfer. Rwanda Agriculture and Animal Resources Development Board, 5016 Kigali-Rwanda
| | - Bancy Waweru
- Department of Crop Innovations & Technology Transfer. Rwanda Agriculture and Animal Resources Development Board, 5016 Kigali-Rwanda
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Hosseinvand M, Eskandari A, Abolafia J, Ghaderi R. Discopersicus hexagrammatus n. sp. (Rhabditida: Tylenchidae), the second species of the genus. J Nematol 2021; 53:e2021-59. [PMID: 34712958 PMCID: PMC8549573 DOI: 10.21307/jofnem-2021-059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Indexed: 12/05/2022] Open
Abstract
Discopersicus hexagrammatus n. sp., is described and illustrated from a population associated with the rhizosphere of carrot (Daucus carota L.) in Dezful, Khuzestan province, south-western Iran. Based on morphological and morphometric data, the new species is characterized by a 601-734 µm long body, a prominent perioral labial disc and oblique amphidial slits, 10-11 µm long stylet, vulva at 65-67% of body length, 15.5-17 µm long spicules, and an elongate conoid tail with a pointed terminus. It is the second species of the genus Discopersicus and differs from its counterpart D. iranicus, by its anterior position of vulva, shorter stylet, lower M.B. ratio, different shape of tail tip, and shorter spicules in male specimens. A molecular phylogenetic analysis using the D2-D3 expansion segments of 28S rDNA sequences, placed the new species in close relationship with five sequences of the genus Boleodorus.
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Affiliation(s)
- Manouchehr Hosseinvand
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
| | - Ali Eskandari
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus 'Las Lagunillas' s/n, Edificio B3, 23071 Jaén, Spain
| | - Reza Ghaderi
- Department of Plant Protection, School of Agriculture, Shiraz University, 71441-65186, Shiraz, Iran
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30
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Abolafia J, Vecchi M. Redescription and phylogenetic analysis of the type species of the genus Panagrellus Thorne, 1938 (Rhabditida, Panagrolaimidae), P. pycnus Thorne, 1938, including the first SEM study. J Nematol 2021; 53:e2021-80. [PMID: 34661116 PMCID: PMC8489252 DOI: 10.21307/jofnem-2021-080] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Indexed: 11/21/2022] Open
Abstract
The identity of Panagrellus pycnus, the type species of the genus Panagrellus, is discussed after studying specimens from a cultured population collected in Italy that fits the original material of the species. A new characterization is consequently provided as follows: body 0.93–1.32 mm long, lip region continuous with the adjoining body, stoma with gymnostom very reduced, pharynx with not swollen metacorpus, neck 161–203 µm long, excretory pore at level of the metacorpus, post-vulval uterine sac 99–162 µm long or 2.6–3.8 times as long as the body diameter divided in a short tubular proximal part and a long swollen distal part, vulva post-equatorial (V = 63–69), female tail conical elongate with acute terminus (133–170 µm, c = 6.8–8.1, c’ = 4.9–7.0), male tail conical elongate with acute terminus (104–137 µm, c = 7.8–10.9, c’ = 3.6–5.1), and spicules 70–81 µm long having angular hook-like and very curved ventrad lamina ending in a spatulate tip with a refringent forked axis. The evolutionary relationships of this species and the genus Panagrellus, as derived from the analyses of 18S and 28S rDNA fragments, are discussed. Additionally, the phylogenetic relationships among the members of the infraorder Panagrolaimomorpha is studied, being the genus Tarantobelus transferred to the family Panagrolaimidae and the new subfamily Tarantobelinae n. subfam. is proposed to accommodate it.
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Affiliation(s)
- Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus "Las Lagunillas" s/n. 23071 Jaén, Spain
| | - Matteo Vecchi
- Department of Biological and Environmental Science, University of Jyvaskyla, PO Box 35, FI-40014, Jyvaskyla, Finland
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31
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Abolafia J, Hosseinvand M, Eskandari A. Description of Spinocephalus tessellatus n. gen., n. sp. (Rhabditida, Cephalobidae) from Iran, a nematode with a new morphological pattern at lip region. J Nematol 2021; 53:e2021-78. [PMID: 34661115 PMCID: PMC8488499 DOI: 10.21307/jofnem-2021-078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Indexed: 11/11/2022] Open
Abstract
A new genus and new species of the family Cephalobidae, subfamily Cephalobinae, named Spinocephalus tessellatus n. gen., n. sp. is described from Iran. Body 0.55-0.67 mm long, cuticle with tessellations, lateral field with two tessellated longitudinal wings, lip region with six triangular lips, primary axils deep and V-shaped with two conoid-elongate guard processes that originate from each lip, secondary axils deep and U-shaped with one thorn-like process (labial probolae?) in lateral view with a small rounded protuberance fused to the oral plate having triradiate symmetry more developed at the acute margin toward each primary axil, oral opening hexagonal, amphids large and clearly rounded to slightly oval, stoma cephaloboid with cheilostom with minute and rounded rhabdia, pharynx cephaloboid with corpus subcylindrical and isthmus very long being 1.4-1.7 times corpus length, nerve ring surrounds the isthmus, excretory pore at the level of the isthmus. Female monodelphic-prodelphic, spermatheca as long as the body diam., post-vulval uterine sac 0.8-1.0 times body diameter, tail conoid with small rounded terminus. Male monorchic, spicules 24-26 µm long, gubernaculum 11-14 µm long, tail conical and ventrally curved with small rounded terminus. Morphological, including SEM observations, and molecular (based on 18S and 28S rDNA) analyses revealed its relationship with the genera Acromoldavicus and Nothacrobeles.
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Affiliation(s)
- Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus 'Las Lagunillas' s/n, Edificio B3, 23071 Jaén, Spain
| | - Manouchehr Hosseinvand
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
| | - Ali Eskandari
- Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
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Comparative study of four known species of the genus Acrobeles von Linstow, 1877 (Nematoda, Cephalobidae) with 'single' and 'double' cuticle from coastal dunes in Spain. J Helminthol 2021; 95:e42. [PMID: 34404496 DOI: 10.1017/s0022149x21000316] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The nematode genus Acrobeles is composed of two morphological groups distinguished by the presence ('double' cuticle) or absence ('single' cuticle) of the refringent inner layer of the cuticle. In the present study, four species of this genus, two with 'single' cuticle (Acrobeles ciliatus and Acrobeles cylindricus) and two with 'double' (Acrobeles aenigmaticus and Acrobeles complexus) are studied from coastal dunes in Spain. This study provides detailed morphological and morphometrical analyses for the four species, while molecular analysis, based on 18S and 28S ribosomal DNA, is provided for A. complexus. The four species are studied with scanning electron microscopy, which is obtained for the first time for A. cylindricus. These analyses revealed morphological and molecular differentiations between both groups, appearing as two related monophyletic entities. The subgenera Acrobeles and Seleborca, formerly considered as separate genera, are proposed to accommodate both groups.
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Mortazavi P, Heydari F, Abolafia J, Castillo P, Pedram M. Morphological and molecular characterization of Filenchus pseudodiscus n. sp. from east Golestan province, north Iran; with an updated phylogeny of Malenchus Andrássy, 1968 (Tylenchomorpha: Tylenchidae). J Nematol 2021; 53:e2021-69. [PMID: 34368771 PMCID: PMC8343207 DOI: 10.21307/jofnem-2021-069] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Indexed: 11/17/2022] Open
Abstract
During a survey in Golestan province, north Iran, two populations belonging to the family Tylenchidae were recovered in association with Quercus sp., and a rotten wood sample of an unidentified forest tree. The first recovered species was mainly characterized by having a disc-like differentiation in the frontal end under the light microscope (LM), proposing it as a tentative member of the genus Discotylenchus. Detailed morphological studies using scanning electron microscope (SEM), however, did not reveal a true disc, but showing the smooth cephalic region, and a narrow annulus behind the cephalic plate. Based upon the cephalic region structure, and by lacking a true disc, the species was identified as a member of the genus Filenchus. This population was further characterized by 555 to 618 μm long females, lateral fields with four incisures, 9 to 10 μm long stylet, spermatheca large, including spheroid sperm, post-vulval uterine sac (PUS) 8 to 12 µm long and gradually tapering to an elongate conoid tail with pointed tip. It was compared with relevant species of Filenchus having four incisures in the lateral fields and similar general morphology. By having a disc-like differentiation in the frontal end under the LM, it was further compared with three similar known species of Discotylenchus. The morphological comparisons with species under two aforementioned genera showed the recovered population belongs to an unknown species, described herein as Filenchus pseudodiscus n. sp. The molecular phylogenetic relationships of the new species using partial small and large subunit ribosomal RNA gene (SSU and LSU D2-D3 rDNA) sequences were reconstructed and discussed. Malenchus gilanensis, the second recovered and studied species was originally established based upon traditional criteria. An updated LSU phylogeny of the genus Malenchus by including M. gilanensis was also presented and its results were discussed.
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Affiliation(s)
- Parnaz Mortazavi
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Fariba Heydari
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus Las Lagunillas, s/n, 23071, Jaén, Spain
| | - Pablo Castillo
- Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004, Córdoba, Spain
| | - Majid Pedram
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
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Zhan J, Qin Y, Gao K, Fan Z, Wang L, Xing R, Liu S, Li P. Efficacy of a Chitin-Based Water-Soluble Derivative in Inducing Purpureocillium lilacinum against Nematode Disease ( Meloidogyne incognita). Int J Mol Sci 2021; 22:6870. [PMID: 34206764 PMCID: PMC8268436 DOI: 10.3390/ijms22136870] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Revised: 06/24/2021] [Accepted: 06/24/2021] [Indexed: 11/29/2022] Open
Abstract
Plant-parasitic nematodes cause severe economic losses annually which has been a persistent problem worldwide. As current nematicides are highly toxic, prone to drug resistance, and have poor stability, there is an urgent need to develop safe, efficient, and green strategies. Natural active polysaccharides such as chitin and chitosan with good biocompatibility and biodegradability and inducing plant disease resistance have attracted much attention, but their application is limited due to their poor solubility. Here, we prepared 6-oxychitin with good water solubility by introducing carboxylic acid groups based on retaining the original skeleton of chitin and evaluated its potential for nematode control. The results showed that 6-oxychitin is a better promoter of the nematicidal potential of Purpureocillium lilacinum than other water-soluble chitin derivatives. After treatment, the movement of J2s and egg hatching were obviously inhibited. Further plant experiments found that it can destroy the accumulation and invasion of nematodes, and has a growth-promoting effect. Therefore, 6-oxychitin has great application potential in the nematode control area.
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Affiliation(s)
- Jiang Zhan
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yukun Qin
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
| | - Kun Gao
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhaoqian Fan
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
| | - Linsong Wang
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
| | - Ronge Xing
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
| | - Song Liu
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
| | - Pengcheng Li
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; (J.Z.); (K.G.); (Z.F.); (L.W.); (R.X.); (S.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), No. 1 Wenhai Road, Qingdao 266237, China
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Afshar FJ, Rashidifard M, Abolafia J, Zouhar M, Fourie H, Pedram M. Laimaphelenchus africanus n. sp. (Tylenchomorpha: Aphelenchoididae) from South Africa, a morphological and molecular phylogenetic study, with an update to the diagnostics of the genus. J Nematol 2021; 53:e2021-53. [PMID: 34079954 PMCID: PMC8138952 DOI: 10.21307/jofnem-2021-053] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Indexed: 11/11/2022] Open
Abstract
A newly recovered population of the genus Laimaphelenchus from a dead maritime pine wood sample in Potchefstroom, South Africa, representing a new species, named L. africanus n. sp., is herein described and illustrated based on morphological and molecular data. The new species is mainly characterized by the following: 750–987 µm long females; a cephalic region with no disc and six cephalic lobs not divided by ribs; a 10.0–12.5 µm long stylet; four incisures in the lateral field; secretory-excretory pore (SE-pore) at slightly posterior to the nerve ring; vulva with a well-developed anterior flap, vagina with two well-developed sclerotized pieces; post-vulval uterine sac (PUS) 63–125 µm long; tail conical, 30–44 µm long, ventrally curved with a subventral stalk in terminus, lacking tubercles, with six to nine small projections at the tip in scanning electron microscopy (SEM); and rare males with 17 μm long spicules. The new species was morphologically compared to those species of the genus with a stalk in tail terminus, lacking tubercles, a vulval flap and four incisures in the lateral field viz., L. liaoningensis, L. preissii, L. simlaensis, L. sinensis, L. spiflatus, and L. unituberculus. Phylogenetically, the new species was placed into the major Laimaphelenchus clade using partial large subunit ribosomal DNA (LSU rDNA D2-D3) sequences. An overall literature review corroborated the presence of the stalk (currently with two main groups) at the tail end is the main characteristic trait delimiting the genus. A compendium based on the characters of the stalk, presence/absence of a vulval flap in females and number of the lateral lines was also established.
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Affiliation(s)
- Farahnaz Jahanshahi Afshar
- Iranian Research Institute of Plant Protection, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran
| | - Milad Rashidifard
- Unit for Environmental Sciences and Management, North-West University, Private Bag X6001, Potchefstroom, 2520, South Africa
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus de las Lagunillas, Avenida de Ben Saprut s/n. 23071, Jaén, Spain
| | - Miloslav Zouhar
- Unit for Environmental Sciences and Management, North-West University, Private Bag X6001, Potchefstroom, 2520, South Africa.,Czech University of Life Sciences, Faculty of Agrobiology, Food and Natural Resources, Department of Plant Protection, Kamycka 129, 165 21, Prague, Czech Republic
| | - Hendrika Fourie
- Unit for Environmental Sciences and Management, North-West University, Private Bag X6001, Potchefstroom, 2520, South Africa
| | - Majid Pedram
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
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Redescription and synonymization of Oscheius citri Tabassum, Shahina, Nasira and Erum, 2016 (Rhabditida, Rhabditidae) from India and its taxonomical consequences. J Helminthol 2021; 95:e24. [PMID: 33880988 DOI: 10.1017/s0022149x21000134] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
A population of a nematode species belonging to the genus Oscheius was isolated in western Uttar Pradesh, India. Morphological and morphometrical studies on this species showed its high similarity with six species described previously from Pakistan (Oscheius citri, O. cobbi, O. cynodonti, O. esculentus, O. punctatus and O. sacchari). The molecular analysis of the ITS1-5.8S-ITS2 rDNA sequences of the Indian population and the six species described from Pakistan showed that all the sequences are almost identical. Thus, based on morphological and molecular characteristics, all of the six above-mentioned Pakistani species and Indian strain do not differ from each other, hence can be considered synonyms. The correct name for this taxon is the first described species O. citri. Additionally, the phylogenetic analysis of the 18S rDNA and the 28S rDNA sequences showed that Oscheius citri is sister to the clade formed by O. chongmingensis and O. rugaoensis from China. The high similarity of morphological and morphometric characteristics of O. citri and other species, O. maqbooli, O. nadarajani, O. niazii, O. shamimi and O. siddiqii, suggest their conspecificity; however, lack of molecular data for these species does not allow this hypothesis to be tested.
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Abolafia J, Ruiz-Cuenca AN. Phoretic invertebrates associated with Rhynchophorus ferrugineus (Coleoptera: Curculionidae) in Canarian date palm from southern Spain. J NAT HIST 2021. [DOI: 10.1080/00222933.2020.1842930] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Jaén, Spain
| | - Alba N. Ruiz-Cuenca
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Jaén, Spain
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Azimi S, Abolafia J, Pedram M. Hemicycliophora ahvasiensis n. sp. (Nematoda: Hemicycliophoridae), and data on a known species, from Iran. J Nematol 2021; 52:e2020-128. [PMID: 33829170 PMCID: PMC8015286 DOI: 10.21307/jofnem-2020-128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Indexed: 11/20/2022] Open
Abstract
Hemicycliophora ahvasiensis n. sp., recovered from the rhizospheric soil of date palm in Khuzestan province, southwest Iran, is described and illustrated based upon morphological, morphometric and molecular data. The new species is characterized by its sheath, closely fitting most of the body, cuticle with or without numerous irregular lines, sometimes appearing as blocks in distal body region. Lateral field without discrete longitudinal lines, but often with continuous broken striae or anastomoses. Continuous lip region with single annulus, slightly elevated labial disc, stylet with posteriorly sloping knobs. Vulva with or without slightly modified lips, spermatheca with sperm and tail conoid, symmetrically narrowing at distal region to form a narrow conical region. Morphologically, the new species looks similar to H. indica, H. labiata, H. siddiqii, H. tenuistriata and H. typica. The latter species appears more similar to the new species under light microscopy, but could be separated using the scanning electron microscopy and molecular data. The new species was also compared with H. epicharoides and H. dulli, two species with close phylogenetic affinities to it. The phylogenetic relationships of the new species were reconstructed and discussed using partial sequences of the D2-D3 expansion segments of large subunit, and internal transcribed spacer regions (LSU D2-D3 and ITS rDNA). Hemicycliophora conida, the second studied species, was recovered from north Iran and characterized by morphological and molecular data.
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Affiliation(s)
- Sedighe Azimi
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus de las Lagunillas, Avenida de Ben Saprut s/n. 23071-Jaén, Spain
| | - Majid Pedram
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
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Amiri Bonab M, Abolafia J, Pedram M. An interesting rare tylenchid species, Antarctenchus urmiensis n. sp. (Tylenchomorpha; Psilenchidae) from Urmia Lake islands, northwest Iran, with a discussion on the taxonomy of related genera. J Nematol 2021. [DOI: 10.21307/jofnem-2021-045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
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40
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Characterization of Nothacrobeles lanceolatus Abolafia & Peña-Santiago, 2003 (Rhabditida, Cephalobidae), a typical species of coastal dunes from Spain. J Helminthol 2021. [DOI: 10.1017/s0022149x21000535] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Abstract
The nematode Nothacrobeles lanceolatus was described in arid soils from Cabo de Gata-Níjar Natural Park, province of Almería (Spain). Since then this species has not been found again. In this study, new data on the distribution and morphological, morphometrical and molecular characteristics (based on 18S and 28S ribosomal DNA) of N. lanceolatus is provided. This species is characterized by having a tessellated cuticle, with its inner layer bearing two rows of cuticular punctations per annulus, lips quadrangular with eight pinnae, labial probolae bifurcate with divergent prongs surrounded by pinnae, pharynx with corpus 2.5–4.0 times isthmus length, post-vulval uterine sac 1.4–2.2 times the corresponding body diameter, and female and male tails conical, bearing a conical mucro with acute terminus. The phylogenetic position of this and related species of the genus Nothacrobeles is discussed. Additionally, bacteria (Pasteuria) and fungi (Catenaria, Nematocida) feeding on N. lanceolatus are showed including light microscopy and scanning electron microscopy illustrations.
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New records of free-living nematode species from Mount Ararat, Turkey, with SEM study of three remarkable species. Biologia (Bratisl) 2021. [DOI: 10.2478/s11756-020-00495-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Bhat AH, Srivastava S, Rana A, Chaubey AK, Machado RAR, Abolafia J. Morphological, morphometrical, and molecular characterization of Metarhabditis amsactae (Ali, Pervez, Andrabi, Sharma and Verma, 2011) Sudhaus, 2011 (Rhabditida, Rhabditidae) from India and proposal of Metarhabditis longicaudata as a junior synonym of M. amsactae. J Nematol 2020; 52:e2020-116. [PMID: 33829202 PMCID: PMC8015365 DOI: 10.21307/jofnem-2020-116] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2020] [Indexed: 01/08/2023] Open
Abstract
A new population of Metarhabditis amsactae from India is morphologically, morphometrically, and molecularly characterized. This material is characterized by having 0.65 to 1.14 mm length, lips rounded, and grouped in pairs, stoma with metastegostoma bearing setose denticles, pharynx with metacorpus slightly swollen and fusiform, nerve ring, and excretory pore located at isthmus level, female reproductive system didelphic-amphidelphic with vulva equatorial, female tail conical-elongate with acute tip, male tail conical with large and robust posterior filiform part, spicules free with hooked manubrium slightly bent ventrad, gubernaculum with narrow corpus, bursa open leptoderan with eight genital papillae and phasmids posterior to the GP8. Molecular studies based on 18S and 28S rDNA genes are provided for the first time for the species. In addition, integrated morphological, morphometrical, and molecular characters are compared with other previous records of the species. According to our analysis, Metarhabditis longicaudata and other material described as different species are proposed as new junior synonyms of M. amsactae.
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Affiliation(s)
- Aashaq Hussain Bhat
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
- Government Degree College, Billawar, 184204, Kathua, Jammu and Kashmir, India
| | - Shreyansh Srivastava
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
| | - Aasha Rana
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
| | - Ashok Kumar Chaubey
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
| | - Ricardo A. R. Machado
- Experimental Biology Research Group, Institute of Biology, University of Neuchâtel, 2000, Neuchâtel, Switzerland
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Jaén, Spain
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Bharti L, Bhat AH, Chaubey AK, Abolafia J. Morphological and molecular characterisation of Merlinius brevidens (Allen, 1955) Siddiqi, 1970 (Nematoda: Rhabditida: Merlinidae) from India. J NAT HIST 2020. [DOI: 10.1080/00222933.2020.1810352] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Lovely Bharti
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
| | - Aashaq Hussain Bhat
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
- Government Degree College, Billawar, Kuthwa, Jammu and Kashmir, India
| | - Ashok Kumar Chaubey
- Nematology Laboratory, Department of Zoology, Chaudhary Charan Singh University, Meerut, India
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Jaén, Spain
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Minowa AK, Garraffoni ARS. Assessing biodiversity shortfalls of freshwater meiofauna from the Atlantic Forest: New species, distribution patterns and the first total-evidence phylogeny of semiplanktonic Gastrotricha. Mol Phylogenet Evol 2020; 152:106926. [PMID: 32771551 DOI: 10.1016/j.ympev.2020.106926] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 05/31/2020] [Accepted: 08/03/2020] [Indexed: 11/25/2022]
Abstract
The Brazilian Atlantic forest is a tropical rainforest recognized as a hotspot of biodiversity, with high species richness and endemicity. This forest extends over a wide latitudinal range, bordering the entire Brazilian coastline, from sea level to high mountains over 2000 m.a.s.L., and presents a variety of environmental conditions and forest physiognomy. Despite many years of intense studies on animal biodiversity in the biome, there is a lack of information on meiofauna taxa causing several shortfalls in biodiversity knowledge of these tiny organisms. In this study, we address some of these shortfalls by describing a new species of Neogossea (Gastrotricha: Chaetonotida) from a lentic ecosystem in southeastern Brazil, surrounded by fragments of Atlantic Forest by using an integrative approach combining different morphological techniques and molecular data. We also point out new hypotheses of homologous structures due to scanning electron microscope observations of the new species. Additionally, we used two numerical methods to assess distribution patterns and historical regionalization of four freshwater meiofaunal taxa (Gastrotricha, Rotifera, Copepoda and Cladocera). For the first time, we accessed the areas of endemism in this biological hotspot based on aquatic fauna with a very peculiar life history. Due to sampling issues and meiofauna species being widespread, our results raise incongruences with previous endemism analyses on vertebrates and arthropods. Finally, we performed the first total-evidence phylogenetic analyses of benthic and semiplanktonic gastrotrichs based on 59 morphological characters and three molecular markers, employing a parsimony approach. The phylogenetic reconstruction supports the hypothesis of a single origin of semiplanktonic gastrotrichs, and both Dasydytidae and Neogosseidae families are monophyletic taxa as well as four non-monotypic genera.
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Affiliation(s)
- Axell K Minowa
- Laboratório de Evolução de Organismos Meiofaunais, Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil
| | - André R S Garraffoni
- Laboratório de Evolução de Organismos Meiofaunais, Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil.
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Abolafia J, Peña-Santiago R. On the identity of Eucephalobus oxyuroides (de Man, 1876) Steiner, 1936 (Rhabditida, Cephalobidae), with an updated taxonomy of the genus and notes about its phylogeny. J Nematol 2020; 52:1-20. [PMID: 32722898 PMCID: PMC8015288 DOI: 10.21307/jofnem-2020-061] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2020] [Indexed: 11/11/2022] Open
Abstract
The identity of Eucephalobus oxyuroides is discussed after studying two Iberian populations that fit the original description of the species. A new characterization is consequently provided as follows: 0.49 to 0.70 mm long body, lip region continuous with the adjoining body and bearing short probolae prongs, neck 132 to 158 µm long, spermatheca 23 to 47 µm long or 1.0 to 1.8 times the corresponding body diameter, post-vulval uterine sac 40 to 54 µm long or 2.0 to 2.5 times as long as the body diameter, V = 58 to 64, female tail conical elongate with very acute terminus (60-79 µm, c = 7.1-10.0, c′ = 4.9-5.8), male tail conical (36-49 µm, c =10.9-14.3, c′ = 2.4-3.4) with an elongate acute mucro, and spicules 21 to 22 µm long. Previous records of the species are revised. An emended diagnosis of the genus is proposed, and its taxonomy is updated with a list of species, key to their identification and illustrations. The evolutionary relationships of Eucephalobus, as derived from the analyses of 18S and 28S rDNA fragments, reveals that it occupies a basal position within the subfamily Cephalobidae.
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Affiliation(s)
- Joaquín Abolafia
- Departamento de Biología Animal , Biología Vegetal y Ecología , Universidad de Jaén , Campus "Las Lagunillas" , s/n. 23071 Jaén , Spain
| | - Reyes Peña-Santiago
- Departamento de Biología Animal , Biología Vegetal y Ecología , Universidad de Jaén , Campus "Las Lagunillas" , s/n. 23071 Jaén , Spain
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Karani HM, Eskandari A, Ghaderi R, Karegar A. Description and molecular phylogeny of Mesocriconema abolafiai n. sp. (Nematoda: Criconematidae) from Iran. J Nematol 2020; 52:1-17. [PMID: 32450012 PMCID: PMC7266032 DOI: 10.21307/jofnem-2020-048] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Indexed: 11/24/2022] Open
Abstract
Mesocriconema abolafiai n. sp. is described by morphological, morphometric, and molecular approaches. The new species is characterized by a body slightly curved with 402 to 612 μm length, 90 to 113 cuticular body annuli with smooth to irregular margins lacking of crenation with not more than one anastomoses, lip region not offset, small flattened submedian lobes, stylet robust (52.8-60.0 μm) with well-developed knobs, open vulva with simple anterior lip, straight vagina, filled spermatheca with globular sperms, presence of males, and conical-acute tail with last annulus bilobed or rounded. Discussions are made on the characterization of M. abolafiai n. sp. from the most closely related species, M. ozarkiense, and several other species having similar tail shape. Furthermore, results of phylogenetic analyses inferred from D2 to D3 expansion fragments of 28S rRNA, 18S rRNA, and ITS rRNA gene sequences revealed the phylogenetic position of the new species within representatives of Criconematidae and supported morphological justifications for considering this population from Iran as a new species in the genus Mesocriconema.
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Affiliation(s)
- Hossein Mirbabaei Karani
- Department of Plant Protection , Faculty of Agriculture , University of Zanjan , 45371-38791 , Zanjan, Iran
| | - Ali Eskandari
- Department of Plant Protection , Faculty of Agriculture , University of Zanjan , 45371-38791 , Zanjan, Iran
| | - Reza Ghaderi
- Department of Plant Protection , School of Agriculture , Shiraz University , 71441-65186 , Shiraz, Iran
| | - Akbar Karegar
- Department of Plant Protection , School of Agriculture , Shiraz University , 71441-65186 , Shiraz, Iran
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47
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Rashidifard M, Du Preez G, Abolafia J, Pedram M. Cephalenchus driekieae n. sp. (Nematoda: Tylenchidae) from South Africa, a new member of the genus with a long pharyngeal overlap. J Nematol 2020; 52:1-10. [PMID: 32329292 PMCID: PMC7266016 DOI: 10.21307/jofnem-2020-031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Indexed: 11/23/2022] Open
Abstract
Cephalenchus driekieae n. sp. is described and illustrated based on its morphological, morphometric, and molecular characteristics. This new species is mainly characterized by its short stylet 11.5 to 13.0 μm, and 13.5 to 17.5 μm long pharyngeal overlap extending over the intestine. It could further be delimited by 451 to 526 μm long females with a prominently annulated cuticle, dorso-ventral amphidial openings as shown using scanning electron microscopy (SEM), four lines in the lateral field, anchor-shaped stylet knobs, empty spermatheca, elongate conoid tail with finely rounded tip and males absent. The shortest stylet and long pharyngeal overlap, distinguish this new species from previously described members and update the characteristics of the genus. With four lines in the lateral field, this new species was morphologically compared with four previously described species with this feature and another species with a short stylet. Molecular phylogenetic analyses using the partial small and large subunit ribosomal DNA gene (SSU and LSU rDNA D2-D3) sequences showed that it was clustered with other Cephalenchus spp. in both SSU and LSU trees, retaining the monophyly of the genus. This new species from South Africa updates the biogeography of the genus.
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Affiliation(s)
- Milad Rashidifard
- Unit for Environmental Sciences and Management, North-West University , Private Bag X6001, Potchefstroom, 2520, South Africa
| | - Gerhard Du Preez
- Unit for Environmental Sciences and Management, North-West University , Private Bag X6001, Potchefstroom, 2520, South Africa
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén , Campus Las Lagunillas, s/n; 23071, Jaén, Spain
| | - Majid Pedram
- Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University , Tehran, Iran
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Heydari F, Abolafia J, Pedram M. Description of Deladenus brevis n. sp. (Sphaerularioidea: Neotylenchidae) from Iran: a morphological and molecular phylogenetic study. J Nematol 2020; 52:1-13. [PMID: 32722902 PMCID: PMC8015350 DOI: 10.21307/jofnem-2020-062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Indexed: 11/23/2022] Open
Abstract
Deladenus brevis n. sp. is described and illustrated based upon its morphological, morphometric, and molecular characters. The new species is mainly characterized by its small body size (367-454 µm long females and 350, 391 µm long males) and has small lateral vulval flaps. It is further characterized by having six lines in the lateral fields, cephalic region slightly expanded, narrower adjacent to the body, short 6 to 7 µm long stylet with three posteriorly sloped knobs, no post-vulval uterine sac (PUS), conical tail, narrowing to a rounded tip, and rare males with slender tylenchoid spicules and bursa reaching the tail tip. By having six lines in the lateral fields, the new species was compared with five known species of the genus, namely D. apopkaetus, D. cocophilus, D. durus, D. obtusicaudatus, and D. persicus, having comparable number (six or seven) of lines in the lateral fields. It was further compared with D. pakistanensis having lateral vulval flaps. The differences with above-mentioned species are discussed. In molecular phylogenetic analyses using nearly full length small and large subunit ribosomal DNA (SSU and LSU D2-D3 rDNA) and cytochrome c oxidase subunit I (COI mtDNA) gene sequences, D. brevis n. sp. formed clade with species of the genus with different clade support values in Bayesian inference.
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Affiliation(s)
- Fariba Heydari
- Department of Plant Pathology , Faculty of Agriculture , Tarbiat Modares University , Tehran, Iran
| | - Joaquín Abolafia
- Departamento de Biología Animal , Biología Vegetal y Ecología , Universidad de Jaén, Campus Las Lagunillas , s/n, 23071, Jaén , Spain
| | - Majid Pedram
- Department of Plant Pathology , Faculty of Agriculture , Tarbiat Modares University , Tehran, Iran
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Rana A, Bhat AH, Bhargava S, Chaubey AK, Abolafia J. Morphological and molecular characterization of Acrobeloides saeedi Siddiqi, De Ley and Khan, 1992 (Rhabditida, Cephalobidae) from India and comments on its status. J Nematol 2020; 52:1-21. [PMID: 32342680 PMCID: PMC7266034 DOI: 10.21307/jofnem-2020-027] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Indexed: 11/11/2022] Open
Abstract
Two cultured populations of Acrobeloides saeedi are described from India. Morphologically and morphometrically this material agrees with other species of the Maximus-group (A. bodenheimeri, A. longiuterus, and A. maximus), especially with A. longiuterus. However, molecular studies based on 18 S, 28 S and ITS rDNA confirmed the Indian material is well differentiated from all of these species. According to this, A. saeedi is considered a valid taxon distinguished mainly from A. bodenheimeri by having dextral female reproductive system (vs sinistral), from A. longiuterus by having larger females (1.03-1.57 vs 0.57-0.88 mm) and from A. maximus by having seta-like labial processes (vs absent) and males as frequent as females (vs males very infrequent). Molecular and phylogenetic studies revealed the present specimens to be conspecific to undescribed Acrobeloides sp. population from Iran, and hence, both regarded to be conspecific to each other. In addition, other similar species are revised: Acrobeloides ishraqi is considered new junior synonym of A. saeedi, Acrobeloides mushtaqi is considered new junior synonym of A. bodenheimeri, while Acrobeloides gossypia is also considered junior synonym of A. saeedi.
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Affiliation(s)
- Aasha Rana
- Nematology Laboratory , Department of Zoology , Chaudhary Charan Singh University , Meerut-250004 , India
| | - Aashaq Hussain Bhat
- Nematology Laboratory , Department of Zoology , Chaudhary Charan Singh University , Meerut-250004 , India
| | - Suman Bhargava
- Nematology Laboratory , Department of Zoology , Chaudhary Charan Singh University , Meerut-250004 , India
| | - Ashok Kumar Chaubey
- Nematology Laboratory , Department of Zoology , Chaudhary Charan Singh University , Meerut-250004 , India
| | - Joaquín Abolafia
- Departamento de Biología Animal, Biología Vegetal y Ecología , Universidad de Jaén , Campus Las Lagunillas, s/n, 23071 Jaén , Spain
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