Intracranial contour extraction with active contour models

Vessel boundary extraction based on a global and local deformable physical model with variable stiffness

Reliable and efficient vessel cross-sectional boundary extraction is very important for many medical magnetic resonance (MR) image studies. General purpose edge detection algorithms often fail for medical MR images processing due to fuzzy boundaries, inconsistent image contrast, missing edge features, and the complicated background of MR images. In this regard, we present a vessel cross-sectional boundary extraction algorithm based on a global and local deformable model with variable stiffness. With the global model, the algorithm can handle relatively large vessel position shifts and size changes. The local deformation with variable stiffness parameters enable the model to stay right on edge points at the location where edge features are strong and at the same time, fit a smooth contour at the location where edge features are missing. Directional gradient information is used to help the model to pick correct edge segments. The algorithm was used to process MR cine phase-contrast images of the aorta from 20 volunteers (over 500 images) with excellent results.

Segmentation of the hippocampus from brain MRI using deformable contours

The application of a discrete dynamic contour model for segmentation of the hippocampus from brain MRI has been investigated. Solutions to several common problems of dynamic contours in this case and similar cases have been developed. A new method for extracting the discontinuous boundary of a structure with multiple edges near the structure has been developed. The method is based on detecting and following edges by external forces. The reliability of the final contour and the model stability have been improved by using a continuous mapping of the external energy and limiting movements of the contour. The problem of optimizing the internal force weight has been overcome by making it dependent on the amount of the external force. Finally, the results of applying the proposed algorithm, which implements the above modifications, to multiple applications have been evaluated.