Interactions of Zn(II) with single and multiple amino acids. Insights from density functional and ab initio calculations

Structures and unimolecular chemistry of M(Pro2-H)+(M = Mg, Ca, Sr, Ba, Mn, Fe, Co, Ni, Cu, Zn) by IRMPD spectroscopy, SORI-CID, and theoretical studies

M(Pro₂-H)⁺complexes were electrosprayed and isolated in an FTICR cell where their unimolecular chemistries and structures were explored using SORI-CID and IRMPD spectroscopy.

The mechanisms of α-H and proton transfers of glycine induced by Mg2+

A MP2/6-31++G(d,p)//B3LYP/6-31++G(d,p) method was used to investigate the mechanisms of α- H and proton transfers of glycine induced by Mg 2+. Eight complexes were obtained, six of which were neutral and the other two were zwitterionic. Among them, the zwitterion with a binding energy of 159.4 kcal/mol was the most stable structure. Conformation transformations of the complexes caused by the rotation of single bond and the transfers of α- H and proton were completed via seven transition states. The inductive effect of Mg 2+ made the electron cloud of glycine deviate to Mg 2+, which activated the covalent bond involving the transferred proton. The neutral complex can be turned into the zwitterionic one by the transfers of both carboxyl hydrogen and α- H , and the energy barrier of each reaction was less than 9.2 kcal/mol. After the transfer of α- H , a delocalized π bond was formed in glycine skeleton and the α- C atom took 0.19 positive charges. So the chemical activity of the glycine enhanced, and glycine was readily available for addition and nucleophilic substitution reactions. The path from the most stable glycine conformer G1 to the zwitterionic conformation I is G1 → G1–G3 → G3 → G3–G4 → G4 → G2–G4 → G2 → VI → I–VI → I, and the highest energy barrier of this path is 9.2 kcal/mol.