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Parker K, Bollis NE, Ryzhov V. Ion-molecule reactions of mass-selected ions. MASS SPECTROMETRY REVIEWS 2024; 43:47-89. [PMID: 36447431 DOI: 10.1002/mas.21819] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Gas-phase reactions of mass-selected ions with neutrals covers a very broad area of fundamental and applied mass spectrometry (MS). Oftentimes, ion-molecule reactions (IMR) can serve as a viable alternative to collision-induced dissociation and other ion dissociation techniques when using tandem MS. This review focuses on the literature pertaining applications of IMR since 2013. During the past decade considerable efforts have been made in analytical applications of IMR, including advances in one of the major techniques for characterization of unsaturated fatty acids and lipids, ozone-induced dissociation, and the development of a new technique for sequencing of large ions, hydrogen atom attachment/abstraction dissociation. Many advances have also been made in identifying gas-phase chemistry specific to a functional group in organic and biological compounds, which are useful in structure elucidation of analytes and differentiation of isomers/isobars. With "soft" ionization techniques like electrospray ionization having become mainstream for quite some time now, the efforts in the area of metal ion catalysis have firmly moved into exploring chemistry of ligated metal complexes in their "natural" oxidation states allowing to model individual steps of mechanisms in homogeneous catalysis, especially in combination with high-level DFT calculations. Finally, IMR continue to contribute to the body of knowledge in the area of chemistry of interstellar processes.
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Affiliation(s)
- Kevin Parker
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, USA
| | - Nicholas E Bollis
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, USA
| | - Victor Ryzhov
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, USA
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Renault E, Jian J, Maurice R, van Stipdonk MJ, Tatosian IJ, Bubas AR, Martens J, Berden G, Oomens J, Gibson JK. Characterization of Uranyl Coordinated by Equatorial Oxygen: Oxo in UO 3 versus Oxyl in UO 3. J Phys Chem A 2021; 125:5544-5555. [PMID: 34138571 DOI: 10.1021/acs.jpca.1c03818] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Uranium trioxide, UO3, has a T-shaped structure with bent uranyl, UO22+, coordinated by an equatorial oxo, O2-. The structure of cation UO3+ is similar but with an equatorial oxyl, O•-. Neutral and cationic uranium trioxide coordinated by nitrates were characterized by collision induced dissociation (CID), infrared multiple-photon dissociation (IRMPD) spectroscopy, and density functional theory. CID of uranyl nitrate, [UO2(NO3)3]- (complex A1), eliminates NO2 to produce nitrate-coordinated UO3+, [UO2(O•)(NO3)2]- (B1), which ejects NO3 to yield UO3 in [UO2(O)(NO3)]- (C1). Finally, C1 associates with H2O to afford uranyl hydroxide in [UO2(OH)2(NO3)]- (D1). IRMPD of B1, C1, and D1 confirms uranyl equatorially coordinated by nitrate(s) along with the following ligands: (B1) radical oxyl O•-; (C1) oxo O2-; and (D1) two hydroxyls, OH-. As the nitrates are bidentate, the equatorial coordination is six in A1, five in B1, four in D1, and three in C1. Ligand congestion in low-coordinate C1 suggests orbital-directed bonding. Hydrolysis of the equatorial oxo in C1 epitomizes the inverse trans influence in UO3, which is uranyl with inert axial oxos and a reactive equatorial oxo. The uranyl ν3 IR frequencies indicate the following donor ordering: O2-[best donor] ≫ O•-> OH-> NO3-.
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Affiliation(s)
- Eric Renault
- CEISAM UMR 6230, CNRS, Université de Nantes, F-44000 Nantes, France
| | - Jiwen Jian
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Rémi Maurice
- SUBATECH, UMR CNRS 6457, IN2P3/IMT Atlantique/Université de Nantes, 4 rue Alfred Kastler, BP 20722, 44307 Nantes Cedex 3, France
| | - Michael J van Stipdonk
- Department of Chemistry and Biochemistry, Duquesne University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Irena J Tatosian
- Department of Chemistry and Biochemistry, Duquesne University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Amanda R Bubas
- Department of Chemistry and Biochemistry, Duquesne University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Jonathan Martens
- Radboud University Nijmegen, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED Nijmegen, The Netherlands
| | - Giel Berden
- Radboud University Nijmegen, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED Nijmegen, The Netherlands
| | - Jos Oomens
- Radboud University Nijmegen, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED Nijmegen, The Netherlands.,van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098XH Amsterdam, The Netherlands
| | - John K Gibson
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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Bubas AR, Perez E, Metzler LJ, Rissler SD, Van Stipdonk MJ. Collision-induced dissociation of [UO 2 (NO 3 )(O 2 )] - and reactions of product ions with H 2 O and O 2. JOURNAL OF MASS SPECTROMETRY : JMS 2021; 56:e4720. [PMID: 33813763 DOI: 10.1002/jms.4720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Revised: 02/23/2021] [Accepted: 03/08/2021] [Indexed: 06/12/2023]
Abstract
We recently reported a detailed investigation of the collision-induced dissociation (CID) of [UO2 (NO3 )3 ]- and [UO2 (NO3 )2 (O2 )]- in a linear ion trap mass spectrometer (J. Mass Spectrom. DOI:10.1002/jms.4705). Here, we describe the CID of [UO2 (NO3 )(O2 )]- which is created directly by ESI, or indirectly by simple elimination of O2 from [UO2 (NO3 )(O2 )2 ]- . CID of [UO2 (NO3 )(O2 )]- creates product ions as at m/z 332 and m/z 318. The former may be formed directly by elimination of O2 , while the latter required decomposition of a nitrate ligand and elimination of NO2 . DFT calculations identify a pathway by which both product ions can be generated, which involves initial isomerization of [UO2 (NO3 )(O2 )]- to create [UO2 (O)(NO2 )(O2 )]- , from which elimination of NO2 or O2 will leave [UO2 (O)(O2 )]- or [UO2 (O)(NO2 )]- , respectively. For the latter product ion, the composition assignment of [UO2 (O)(NO2 )]- rather than [UO2 (NO3 )]- is supported by ion-molecule reaction behavior, and in particular, the fact that spontaneous addition of O2 , which is predicted to be the dominant reaction pathway for [UO2 (NO3 )]- is not observed. Instead, the species reacts with H2 O, which is predicted to be the favored pathway for [UO2 (O)(NO2 )]- . This result in particular demonstrates the utility of ion-molecule reactions to assist the determination of ion composition. As in our earlier study, we find that ions such as [UO2 (O)(NO2 )]- and [UO2 (O)(O2 )]- form H2 O adducts, and calculations suggest these species spontaneously rearrange to create dihydroxides.
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Affiliation(s)
- Amanda R Bubas
- Department of Chemistry and Biochemistry, Duquesne University, Pittsburgh, Pennsylvania, USA
- Department of Chemistry, University of Utah, Salt Lake City, Utah, USA
| | - Evan Perez
- Department of Chemistry and Biochemistry, Duquesne University, Pittsburgh, Pennsylvania, USA
- Department of Chemistry, Yale University, New Haven, Connecticut, USA
| | - Luke J Metzler
- Department of Chemistry and Biochemistry, Duquesne University, Pittsburgh, Pennsylvania, USA
| | - Scott D Rissler
- Department of Chemistry and Biochemistry, Duquesne University, Pittsburgh, Pennsylvania, USA
| | - Michael J Van Stipdonk
- Department of Chemistry and Biochemistry, Duquesne University, Pittsburgh, Pennsylvania, USA
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