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Wang S, Li T, He H, Li Y. Dynamical changes of interaction across functional brain communities during propofol-induced sedation. Cereb Cortex 2024; 34:bhae263. [PMID: 38918077 DOI: 10.1093/cercor/bhae263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Revised: 05/28/2024] [Accepted: 06/06/2024] [Indexed: 06/27/2024] Open
Abstract
It is crucial to understand how anesthetics disrupt information transmission within the whole-brain network and its hub structure to gain insight into the network-level mechanisms underlying propofol-induced sedation. However, the influence of propofol on functional integration, segregation, and community structure of whole-brain networks were still unclear. We recruited 12 healthy subjects and acquired resting-state functional magnetic resonance imaging data during 5 different propofol-induced effect-site concentrations (CEs): 0, 0.5, 1.0, 1.5, and 2.0 μg/ml. We constructed whole-brain functional networks for each subject under different conditions and identify community structures. Subsequently, we calculated the global and local topological properties of whole-brain network to investigate the alterations in functional integration and segregation with deepening propofol sedation. Additionally, we assessed the alteration of key nodes within the whole-brain community structure at each effect-site concentrations level. We found that global participation was significantly increased at high effect-site concentrations, which was mediated by bilateral postcentral gyrus. Meanwhile, connector hubs appeared and were located in posterior cingulate cortex and precentral gyrus at high effect-site concentrations. Finally, nodal participation coefficients of connector hubs were closely associated to the level of sedation. These findings provide valuable insights into the relationship between increasing propofol dosage and enhanced functional interaction within the whole-brain networks.
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Affiliation(s)
- Shengpei Wang
- Laboratory of Brain Atlas and Brain-Inspired Intelligence, Institute of Automation, Chinese Academy of Sciences, No. 95 Zhongguancun East Rd, Haidian District, Beijing 100190, PR China
- Key Laboratory of Brain Cognition and Brain-Inspired Intelligence Technology, Chinese Academy of Sciences, No. 95 Zhongguancun East Rd, Haidian District, Beijing 100190, PR China
| | - Tianzuo Li
- Department of Anesthesiology, Beijing Shijitan Hospital, Capital Medical University, No. 10 Yangfangdian Tieyi Rd, Haidian District, Beijing 100038, PR China
| | - Huiguang He
- Laboratory of Brain Atlas and Brain-Inspired Intelligence, Institute of Automation, Chinese Academy of Sciences, No. 95 Zhongguancun East Rd, Haidian District, Beijing 100190, PR China
- Key Laboratory of Brain Cognition and Brain-Inspired Intelligence Technology, Chinese Academy of Sciences, No. 95 Zhongguancun East Rd, Haidian District, Beijing 100190, PR China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, No. 1 Yanqihu East Road, Huairou District, Beijing 101408, PR China
| | - Yun Li
- Department of Anesthesiology, Beijing Tiantan Hospital, Capital Medical University, No. 119, South Fourth Ring West Road, Fengtai District, Beijing 100070, PR China
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Simultaneous spatial-temporal decomposition for connectome-scale brain networks by deep sparse recurrent auto-encoder. Brain Imaging Behav 2021; 15:2646-2660. [PMID: 33755922 DOI: 10.1007/s11682-021-00469-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/02/2021] [Indexed: 10/21/2022]
Abstract
Exploring the spatial patterns and temporal dynamics of human brain activity has been of great interest, in the quest to better understand connectome-scale brain networks. Though modeling spatial and temporal patterns of functional brain networks have been researched for a long time, the development of a unified and simultaneous spatial-temporal model has yet to be realized. For instance, although some deep learning methods have been proposed recently in order to model functional brain networks, most of them can only represent either spatial or temporal perspective of functional Magnetic Resonance Imaging (fMRI) data and rarely model both domains simultaneously. Due to the recent success in applying sequential auto-encoders for brain decoding, in this paper, we propose a deep sparse recurrent auto-encoder (DSRAE) to be applied unsupervised to learn spatial patterns and temporal fluctuations of brain networks at the same time. The proposed DSRAE was evaluated and validated based on three tasks of the publicly available Human Connectome Project (HCP) fMRI dataset, resulting with promising evidence. To the best of our knowledge, the proposed DSRAE is among the early efforts in developing unified models that can extract connectome-scale spatial-temporal networks from 4D fMRI data simultaneously.
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Listyarifah D, Nieminen MT, Mäkinen LK, Haglund C, Grenier D, Häyry V, Nordström D, Hernandez M, Yucel-Lindberg T, Tervahartiala T, Ainola M, Sorsa T, Hagström J. Treponema denticola chymotrypsin-like proteinase is present in early-stage mobile tongue squamous cell carcinoma and related to the clinicopathological features. J Oral Pathol Med 2018; 47:764-772. [PMID: 29747237 DOI: 10.1111/jop.12729] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/02/2018] [Indexed: 12/14/2022]
Abstract
BACKGROUND Certain periodontopathogenic bacteria have been linked to cancers. Treponema denticola (Td) is associated with severe periodontitis. Chymotrypsin-like proteinase (CTLP), a major virulence factor of Td, can degrade various host proteins and peptides, and modulate inflammatory responses. However, the role of Td in the tongue carcinogenesis remains unknown. This study aimed to investigate the presence of Td-CTLP in early-stage mobile tongue squamous cell carcinoma (MTSCC) and its relation to clinical and pathological characteristics. METHODS The immunopositivity of Td-CTLP was assessed in samples obtained from 60 patients with MTSCC and associated with their clinicopathological data. Additionally, Td-CTLP expression was compared with immunoexpression of matrix metalloproteinases (MMP-8 and MMP-9), toll-like receptors (TLR-2, TLR-4, TLR-7 and TLR-9), c-Myc, Ki-67, Bmi-1 and Snail. RESULTS Treponema denticola-chymotrypsin-like proteinase was present in 95% of MTSCC tumours of which many (40.4%) showed high immunopositivity. Td-CTLP positivity was significantly associated with invasion depth, tumour diameter and the expression of TLR-7, TLR-9 and c-Myc. High Td-CTLP immunopositivity in younger patients (≤ 60 years old) predicted early relapse. CONCLUSION Our data indicate that Td and its CTLP are present in early-stage MTSCC carcinoma and may contribute to carcinogenesis, and therefore provide novel perspectives into intervention and therapeutic measures of MTSCC.
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Affiliation(s)
- Dyah Listyarifah
- Department of Medicine, Clinicum, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland.,Department of Dental Biomedical Sciences, Faculty of Dentistry, Universitas Gadjah Mada, Yogyakarta, Indonesia.,Department of Oral and Maxillofacial Diseases, Clinicum, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland
| | - Mikko T Nieminen
- Department of Oral and Maxillofacial Diseases, Clinicum, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland
| | - Laura K Mäkinen
- Department of Otorhinolaryngology and Head and Neck Surgery, University of Helsinki and Helsinki University Hospital, Helsinki, Finland
| | - Caj Haglund
- Department of Surgery, Helsinki University Hospital, HUS, Helsinki, Finland.,Research Program Unit, Translational Cancer Biology, University of Helsinki, Helsinki, Finland
| | - Daniel Grenier
- Faculté de Médecine Dentaire, Université Laval, Quebec City, QC, Canada
| | - Valtteri Häyry
- Department of Otorhinolaryngology and Head and Neck Surgery, University of Helsinki and Helsinki University Hospital, Helsinki, Finland
| | - Dan Nordström
- Department of Internal Medicine and Rehabilitation, University of Helsinki and Helsinki University Central Hospital, Helsinki, Finland
| | - Marcela Hernandez
- Laboratory of Periodontal Biology and Department of Oral Pathology and Medicine, Dentistry Unit, Faculty of Dentistry, Faculty of Health Sciences, Universidad Autónoma de Chile, University of Chile, Santiago, Chile
| | - Tülay Yucel-Lindberg
- Division of Periodontology, Department of Dental Medicine, Karolinska Institutet, Huddinge, Sweden
| | - Taina Tervahartiala
- Department of Oral and Maxillofacial Diseases, Clinicum, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland
| | - Mari Ainola
- Department of Medicine, Clinicum, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland
| | - Timo Sorsa
- Department of Oral and Maxillofacial Diseases, Clinicum, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland.,Division of Periodontology, Department of Dental Medicine, Karolinska Institutet, Huddinge, Sweden
| | - Jaana Hagström
- Research Program Unit, Translational Cancer Biology, University of Helsinki, Helsinki, Finland.,Department of Pathology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland
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Greither T, Koser F, Kappler M, Bache M, Lautenschläger C, Göbel S, Holzhausen HJ, Wach S, Würl P, Taubert H. Expression of human Piwi-like genes is associated with prognosis for soft tissue sarcoma patients. BMC Cancer 2012; 12:272. [PMID: 22748119 PMCID: PMC3472179 DOI: 10.1186/1471-2407-12-272] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2011] [Accepted: 05/15/2012] [Indexed: 11/16/2022] Open
Abstract
Background Argonaute genes are essential for RNA interference, stem cell maintenance and differentiation. The Piwi-like genes, a subclass of the Argonaute genes, are expressed mainly in the germline. These genes may be re-expressed in tumors, and expression of the Piwi-like genes is associated with prognosis in several types of tumors. Methods We measured the expression of Piwi-like mRNAs (Piwi-like 2–4) in 125 soft tissue sarcoma (STS) samples by qPCRs. Statistical tests were applied to study the correlation of expression levels with tumor-specific survival for STS patients. Results In multivariate Cox’s regression analyses, we showed that low Piwi-like 2 and Piwi-like 4 mRNA expression were significantly associated with a worse prognosis (RR = 1.87; p = 0.032 and RR = 1.82; p = 0.039). Low expression of both genes was associated with a 2.58-fold increased risk of tumor-related death (p = 0.01). Piwi-like 4 and combined Piwi-like 2 and 4 mRNA levels correlated significantly with prognosis (RR = 3.53; p = 0.002 and RR = 5.23; p = 0.004) only for female but not for male patients. However, combined low Piwi-like 2 and 3 transcript levels were associated with worse survival (RR = 5.90; p = 0.02) for male patients. Conclusions In this study, we identified a significant association between the expression of Piwi-like 2 and 4 mRNAs and the tumor-specific survival of soft tissue sarcoma patients. Furthermore, a connection between sex and the impact of Piwi-like mRNA expressions on STS patients’ prognosis was shown for the first time.
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Affiliation(s)
- Thomas Greither
- Div, Molecular Urology, FAU Erlangen-Nürnberg, University Clinic of Urology, Erlangen, Germany
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Kim DH, Yun JY, Lee JH, Myoung H, Kim SM. Cancer stem cell theory and update in oral squamous cell carcinoma. J Korean Assoc Oral Maxillofac Surg 2011. [DOI: 10.5125/jkaoms.2011.37.2.97] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Affiliation(s)
- Deok-Hun Kim
- Division of Oral and Maxillofacial Surgery, Department of Dentistry, School of Dentistry, Seoul National University, Seoul, Korea
| | - Jun-Yong Yun
- Division of Oral and Maxillofacial Surgery, Department of Dentistry, School of Dentistry, Seoul National University, Seoul, Korea
| | - Ju-Hyun Lee
- Division of Oral and Maxillofacial Surgery, Department of Dentistry, School of Dentistry, Seoul National University, Seoul, Korea
| | - Hoon Myoung
- Division of Oral and Maxillofacial Surgery, Department of Dentistry, School of Dentistry, Seoul National University, Seoul, Korea
| | - Soung-Min Kim
- Division of Oral and Maxillofacial Surgery, Department of Dentistry, School of Dentistry, Seoul National University, Seoul, Korea
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Renkonen S, Häyry V, Heikkilä P, Leivo I, Haglund C, Mäkitie AA, Hagström J. Stem cell-related proteins C-KIT, C-MYC and BMI-1 in juvenile nasopharyngeal angiofibroma--do they have a role? Virchows Arch 2010; 458:189-95. [PMID: 21113618 DOI: 10.1007/s00428-010-1010-9] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2010] [Revised: 11/03/2010] [Accepted: 11/07/2010] [Indexed: 01/11/2023]
Abstract
Juvenile nasopharyngeal angiofibroma (JNA) is a highly vascular tumour, occurring almost exclusively in adolescent males. Histogenesis of JNA remains unclear, two optional theories proposing either fibrous or vascular tissue as the tissue of origin. Stem cell-related proteins have been discussed to possibly participate in the growth of these tumours. In our study, we reviewed retrospective clinicopathological data of 26 JNA patients. By immunohistochemistry, we investigated the cellular distribution and expression levels of stem cell-related proteins C-KIT, C-MYC and BMI-1 and their correlation with cell and vessel density of the tumour. Contrary to earlier reports, we detected C-KIT expression in addition to stromal cells also in endothelial cells. The C-KIT expression was more dominant in slit vessels than large vessels. A significant correlation was found between endothelial immunoexpression of C-KIT and cellular density of the tumour. C-MYC and BMI-1 expression was detected in stromal cells only. Due to our finding of C-KIT expression in both stromal and endothelial cells and the strong correlation between the endothelial C-KIT expression and cellular density, we suggest that, besides the stromal tissue, the vascular component might take part in the neoplastic growth of JNA.
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Affiliation(s)
- Suvi Renkonen
- Department of Otorhinolaryngology, Head and Neck Surgery, Helsinki University Central Hospital, Helsinki, Finland
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Mishra R. Glycogen synthase kinase 3 beta: can it be a target for oral cancer. Mol Cancer 2010; 9:144. [PMID: 20537194 PMCID: PMC2906469 DOI: 10.1186/1476-4598-9-144] [Citation(s) in RCA: 144] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2009] [Accepted: 06/11/2010] [Indexed: 12/30/2022] Open
Abstract
Despite progress in treatment approaches for oral cancer, there has been only modest improvement in patient outcomes in the past three decades. The frequent treatment failure is due to the failure to control tumor recurrence and metastasis. These failures suggest that new targets should be identified to reverse oral epithelial dysplastic lesions. Recent developments suggest an active role of glycogen synthase kinase 3 beta (GSK3 β) in various human cancers either as a tumor suppressor or as a tumor promoter. GSK3β is a Ser/Thr protein kinase, and there is emerging evidence that it is a tumor suppressor in oral cancer. The evidence suggests a link between key players in oral cancer that control transcription, accelerated cell cycle progression, activation of invasion/metastasis and anti-apoptosis, and regulation of these factors by GSK3β. Moreover, the major upstream kinases of GSK3β and their oncogenic activation by several etiological agents of oral cancer support this hypothesis. In spite of all this evidence, a detailed analysis of the role of GSK3β in oral cancer and of its therapeutic potential has yet to be conducted by the scientific community. The focus of this review is to discuss the multitude of roles of GSK3β, its possible role in controlling different oncogenic events and how it can be targeted in oral cancer.
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Affiliation(s)
- Rajakishore Mishra
- Dept, of Molecular Pharmacology and Therapeutics, Loyola University Medical Center, 2160 South First Avenue, Bldg 102, Maywood, IL-60153, USA.
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Häyry V, Mäkinen LK, Atula T, Sariola H, Mäkitie A, Leivo I, Keski-Säntti H, Lundin J, Haglund C, Hagström J. Bmi-1 expression predicts prognosis in squamous cell carcinoma of the tongue. Br J Cancer 2010; 102:892-7. [PMID: 20145620 PMCID: PMC2833245 DOI: 10.1038/sj.bjc.6605544] [Citation(s) in RCA: 94] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2009] [Revised: 12/14/2009] [Accepted: 12/17/2009] [Indexed: 01/12/2023] Open
Abstract
BACKGROUND The prognosis of squamous cell carcinoma of the oral tongue is poor and it would be beneficial to find prognostic markers to better adjust treatment. Bmi-1 controls cell cycle and self-renewal of tissue stem cells, transcription factor c-myc affects cell proliferation and apoptosis, and Snail regulates epithelial-mesenchymal transition. The expression of these markers has been connected to prognosis in many cancer types. METHODS Bmi-1, c-myc, and Snail expressions were studied in our material consisting of 73 primarily T1N0M0 oral tongue carcinoma patients. We compared the immunoexpressions of Bmi-1, c-myc, and Snail with clinical parameters including the degree of histological differentiation, tumour size, TNM classification, depth of invasion, and resection margins. In addition, survival analyses were performed, comparing disease-free survival time with the registered protein expression of the markers mentioned above. RESULTS A significant correlation between Bmi-1 protein expression and recurrence (log-rank test, P=0.005) was detected. Snail and c-myc expression did not correlate with prognosis. Snail expression correlated with histopathological grade (Fisher's exact test, P=0.007) and with the invasion depth of tumours (chi(2)-test, P=0.037). CONCLUSION Negative Bmi-1 immunoexpression might serve as a marker of poor prognosis in oral tongue carcinoma patients.
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Affiliation(s)
- V Häyry
- Department of Otolaryngology and Head and Neck Surgery, Helsinki University Central Hospital, PO Box 220, Haartmaninkatu 4E, Helsinki 00290 HUS, Finland
- Department of Developmental Biology, Institute of Biomedicine, University of Helsinki, PO Box 63, Haartmaninkatu 8, Helsinki 00014, Finland
| | - L K Mäkinen
- Department of Otolaryngology and Head and Neck Surgery, Helsinki University Central Hospital, PO Box 220, Haartmaninkatu 4E, Helsinki 00290 HUS, Finland
| | - T Atula
- Department of Otolaryngology and Head and Neck Surgery, Helsinki University Central Hospital, PO Box 220, Haartmaninkatu 4E, Helsinki 00290 HUS, Finland
| | - H Sariola
- Department of Developmental Biology, Institute of Biomedicine, University of Helsinki, PO Box 63, Haartmaninkatu 8, Helsinki 00014, Finland
| | - A Mäkitie
- Department of Otolaryngology and Head and Neck Surgery, Helsinki University Central Hospital, PO Box 220, Haartmaninkatu 4E, Helsinki 00290 HUS, Finland
| | - I Leivo
- Department of Pathology, Haartman Institute, University of Helsinki, PO Box 21, Haartmaninkatu 3, Helsinki 00014, Finland
| | - H Keski-Säntti
- Department of Otolaryngology and Head and Neck Surgery, Helsinki University Central Hospital, PO Box 220, Haartmaninkatu 4E, Helsinki 00290 HUS, Finland
| | - J Lundin
- Department of Oncology, Helsinki University Central Hospital, PO Box 180, Haartmaninkatu 4, Helsinki 00290 HUS, Finland
| | - C Haglund
- Department of General Surgery, Helsinki University Central Hospital, PO Box 340, Haartmaninkatu 4, Helsinki 00290 HUS, Finland
| | - J Hagström
- Department of Pathology, Haartman Institute, University of Helsinki, PO Box 21, Haartmaninkatu 3, Helsinki 00014, Finland
- Department of Oral Pathology, Institute of Dentistry, University of Helsinki, PO Box 41, Mannerheimintie 172, Helsinki 00014, Finland
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