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Sun S, Cui B, Kong F, Zhang Z, Qiao Y, Zhang S, Zhang X, Sun C. Construction and application of a QSRR approach for identifying flavonoids. J Pharm Biomed Anal 2024; 240:115929. [PMID: 38147703 DOI: 10.1016/j.jpba.2023.115929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 11/24/2023] [Accepted: 12/16/2023] [Indexed: 12/28/2023]
Abstract
A quantitative structure retention relationship (QSRR) method was developed to identify flavonoid isomers auxiliary using an ultra high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS) method based on the linear relationships between the Ln(k') values of flavonoids and their hydrogen bonding energy (XAH) and dissolution energy (ES). Chromatographic separation was achieved with a Hypersil GOLD C18 (100 mm × 2.1 mm, 1.9 µm) column and Agilent SB-C18 (2.1 ×50 mm, 1.8 µm) column on a Dionex Ultimate 3000 RSLC chromatograph. Compounds were eluted isocratically using a mobile phase containing 0.1% formic acid/water solution and methanol at a ratio of 55:45 (v/v). Mass spectrometry was performed in the negative and positive ionization modes on a Thermo Fisher Q Exactive Orbitrap mass spectrometer equipped with an electrospray ionization interface. The established QSRR model was Ln(k') = 5.6163 + 0.0469ES - 0.0984XAH, with a determination coefficient (R2) of 0.9981, adjusted determination coefficient (adjR2) of 0.9976, and corrected root mean square error of 0.0682. The determination coefficient of the leave-one-out (LOO) cross-validation (Q2LOO) was 0.9976, and the cross-verification root mean square error was 0.0754. Simulated samples containing 7 flavonoids were used to validate the feasibility of the method. The classical method (UHPLC-MS/MS combined the CD software and the mzCloud, mzVault and Chemspider databases) was used to identify the seven flavonoids in the simulated samples. This classic identification strategy cannot provide accurate identification results, which provided multiple identification results for each compound in the simulated samples. On the basis of the results, the 7 flavonoids were accurately identified by the established QSRR model, and the reference standards were used to validate it. The relative error of retention time(RE(tR)) between the model calculation and experimental results was less than 10%. This method effectively complements and improves the classical methods, that UHPLC-MS/MS combined the CD software and the mass spectra databases were used to identify flavonoids identification.
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Affiliation(s)
- Shiyuan Sun
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China
| | - Biyue Cui
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China
| | - Fanyu Kong
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China
| | - Zitong Zhang
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China
| | - Youfu Qiao
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China
| | - Shuting Zhang
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China; Shenyang Pharmaceutical University, P.O. Box 117004, China
| | - Xinran Zhang
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China.
| | - Changhai Sun
- College of Pharmacy, Jiamusi University, P.O. Box 154007, China.
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Multivariate assessment of anticancer oleanane triterpenoids lipophilicity. J Chromatogr A 2021; 1656:462552. [PMID: 34571283 DOI: 10.1016/j.chroma.2021.462552] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Revised: 09/09/2021] [Accepted: 09/10/2021] [Indexed: 12/24/2022]
Abstract
Naturally occurring molecules are excellent sources of lead compounds. A series of oleanolic acid (OA) derivatives previously synthesized in our laboratory, which show promising antitumor activity, have been analyzed in terms of lipophilicity evaluation applying chromatographic and computational approaches. Retention data obtained on three reversed-phase liquid chromatography stationary phases (RP-HPLC) and immobilized artificial membrane chromatography (IAM-HPLC) were compared with computational methods using chemometric tools such as cluster analysis, principal component analysis and sum of ranking differences. To investigate the molecular mechanism of retention quantitive structure retention relationship analysis was performed, based on the genetic algorithm coupled with multiple linear regression (GA-MLR). The obtained results suggested that the ionization potential of studied molecules significantly affects their retention in classical RP-HPLC. In IAM-HPLC additionally, polarizability-related descriptors also play an essential role in that process. The lipophilicity indices comparison shows significant differences between the computational lipophilicity and chromatographically determined ones.
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Yuan GY, Liu ZL, Lai Q, Fu F, Zhang L, Kou JP, Yu BY, Li F. HPLC-QTOF/MS-based metabolomics to explore the molecular mechanisms of Yiqi Fumai Lyophilized Injection in heart failure mice. J Sep Sci 2021; 44:2545-2563. [PMID: 33942520 DOI: 10.1002/jssc.202001269] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2020] [Revised: 04/12/2021] [Accepted: 04/22/2021] [Indexed: 12/11/2022]
Abstract
Chronic heart failure is a common and fatal disease triggered by loss of normal cardiac function. Yiqi Fumai Lyophilized Injection is widely used in the treatment of cardiovascular diseases, especially chronic heart failure. In this study, a model of chronic heart failure in mice was established with permanent coronary artery ligation followed by Yiqi Fumai Lyophilized Injection intervention for 14 days. Then, the endogenous metabolites of mice plasma and urine samples were screened through nontargeted metabolomics techniques. The results indicated that Yiqi Fumai Lyophilized Injection treatment changed the metabolic pattern of chronic heart failure and regulated valine, leucine, and isoleucine biosynthesis, taurine and hypotaurine metabolism, histidine metabolism and arginine biosynthesis, etc. Finally, the cardioprotective mechanism of Yiqi Fumai Lyophilized Injection was further verified in the mouse model of chronic heart failure and angiotensin II-induced cardiac fibroblasts based on metabolomics. The results showed that Yiqi Fumai Lyophilized Injection could inhibit myocardial fibrosis to improve chronic heart failure. This study firstly elucidated the metabolic network and pathways regulated by Yiqi Fumai Lyophilized Injection, which might facilitate the realization of the clinically accurate application of Yiqi Fumai Lyophilized Injection in the treatment of chronic heart failure.
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Affiliation(s)
- Guang-Ying Yuan
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Ze-Liang Liu
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Qiong Lai
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Fei Fu
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Lu Zhang
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Jun-Ping Kou
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Bo-Yang Yu
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
| | - Fang Li
- Jiangsu Key Laboratory of TCM Evaluation and Translational Research, Research Center for Traceability and Standardization of TCMs, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, P. R. China
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Luo C, Hu G, Huang M, Zou J, Jiang Y. Prediction on separation factor of chiral arylhydantoin compounds and recognition mechanism between chiral stationary phase and the enantiomers. J Mol Graph Model 2020; 94:107479. [DOI: 10.1016/j.jmgm.2019.107479] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Revised: 09/24/2019] [Accepted: 10/17/2019] [Indexed: 01/06/2023]
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Milojković-Opsenica D, Andrić F, Šegan S, Trifković J, Tešić Ž. Thin-layer chromatography in quantitative structure-activity relationship studies. J LIQ CHROMATOGR R T 2018. [DOI: 10.1080/10826076.2018.1447892] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
Affiliation(s)
| | - Filip Andrić
- Faculty of Chemistry, University of Belgrade, Belgrade, Serbia
| | - Sandra Šegan
- ICTM - Department of Chemistry, University of Belgrade, Belgrade, Serbia
| | | | - Živoslav Tešić
- Faculty of Chemistry, University of Belgrade, Belgrade, Serbia
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Ciura K, Dziomba S, Nowakowska J, Markuszewski MJ. Thin layer chromatography in drug discovery process. J Chromatogr A 2017; 1520:9-22. [DOI: 10.1016/j.chroma.2017.09.015] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2017] [Revised: 08/29/2017] [Accepted: 09/06/2017] [Indexed: 10/18/2022]
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Devalapalli MMR, Cheruvu HS, Yertha T, Veeravalli VB, Sampathi S, Shivakumar S. Hansen solubility parameters for assay method optimization of simvastatin, ramipril, atenolol, hydrochlorothiazide and aspirin in human plasma using liquid chromatography with tandem mass spectrometry. J Sep Sci 2017; 40:3662-3674. [PMID: 28722356 DOI: 10.1002/jssc.201700565] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2017] [Revised: 07/12/2017] [Accepted: 07/12/2017] [Indexed: 11/07/2022]
Abstract
A simple, specific, sensitive, validated method was developed using liquid chromatography with tandem mass spectrometry with electrospray ionization of human plasma for the simultaneous estimation of drugs (simvastatin, ramipril, atenolol, hydrochlorothiazide, and aspirin) of PolycapTM capsule used in cardiovascular therapy. The interaction of these actives including internal standards between the stationary and mobile phase were investigated using Hansen solubility parameters. Chromatographic separation was performed on Phenomenex Synergi Polar-RP (30 × 2 mm, 4 μm) column with a gradient mobile phase composition of acetonitrile and 5 mM ammonium formate for positive mode and 0.1% formic acid in both water and acetonitrile for negative mode. The flow rate and runtime were 1.0 mL/min and 3.5 min, respectively. Sample extraction was done by protein precipitation using acetonitrile, enabling a fast analysis. The calibration ranges from 0.1 to 100, 0.1 to 100, and 1 to 1000 ng/mL for simvastatin, ramipril, and atenolol using internal standard carbamazepine in positive mode, respectively, whereas it was 0.3-300 and 2-2000 ng/mL for hydrochlorothiazide and aspirin using internal standard 7-hydroxy coumarin in negative mode, respectively. Hansen solubility parameters can be used as a high-throughput optimizing tool for column and mobile phase selection in bioanalysis. This validated bioanalytical method has the potential for future fixed dose combination based preclinical and clinical studies that can save analysis time.
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Affiliation(s)
| | - Hanumanth Srikanth Cheruvu
- Biology Division, DMPK Laboratory, GVKBIO, Hyderabad, India.,Department of Pharmaceutics, National Institute of Pharmaceutical Education and Research, Hyderabad, India
| | | | | | - Sunitha Sampathi
- Department of Pharmaceutics, National Institute of Pharmaceutical Education and Research, Hyderabad, India
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Wicha-Komsta K, Komsta Ł. Unconventional TLC systems in lipophilicity determination: A review. J LIQ CHROMATOGR R T 2017. [DOI: 10.1080/10826076.2017.1298023] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
| | - Łukasz Komsta
- Department of Medicinal Chemistry, Medical University of Lublin, Lublin, Poland
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Affiliation(s)
- Łukasz Komsta
- Department of Medicinal Chemistry, Medical University of Lublin, Lublin, Poland
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Filipic S, Elek M, Nikolic K, Agbaba D. Quantitative structure-retention relationship modeling of the retention behavior of guanidine and imidazoline derivatives in reversed-phase thin-layer chromatography. JPC-J PLANAR CHROMAT 2015. [DOI: 10.1556/jpc.28.2015.2.6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Milojković-Opsenica D, Majstorović H, Radoičić A, Tešič Ž. 3-Cyanopropylsiloxane-bonded silica gel: Characteristics and applications in thin-layer chromatography. JPC-J PLANAR CHROMAT 2015. [DOI: 10.1556/jpc.28.2015.2.4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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12
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Wang M, Fu J, Lv M, Tian Y, Xu F, Song R, Zhang Z. Effect of wine processing and acute blood stasis on the serum pharmacochemistry of rhubarb: A possible explanation for processing mechanism. J Sep Sci 2014; 37:2499-503. [DOI: 10.1002/jssc.201400473] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2014] [Revised: 06/19/2014] [Accepted: 06/21/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Min Wang
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
| | - Jinfeng Fu
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
| | - Mengying Lv
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
| | - Yuan Tian
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
| | - Fengguo Xu
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
- State Key Laboratory of Natural Medicine; China Pharmaceutical University; Nanjing China
| | - Rui Song
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
- State Key Laboratory of Natural Medicine; China Pharmaceutical University; Nanjing China
| | - Zunjian Zhang
- Key Laboratory of Drug Quality Control and Pharmacovigilance; China Pharmaceutical University; Nanjing China
- State Key Laboratory of Natural Medicine; China Pharmaceutical University; Nanjing China
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Abstract
AbstractThe most important advances in planar chromatography published between November 1, 2011 and November 1, 2013 are reviewed in this paper. Included are an introduction to the current status of the field; student experiments, books, and reviews; theory and fundamental studies; apparatus and techniques for sample preparation and TLC separations (sample application and plate development with the mobile phase); detection and identification of separated zones (chemical and biological detection, TLC/mass spectrometry, and TLC coupled with other spectrometric methods); techniques and instruments for quantitative analysis; preparative layer chromatography; and thin layer radiochromatography. Numerous applications to a great number of compound types and sample matrices are presented in all sections of the review.
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Komsta Ł, Gowin E. Revisiting thin-layer chromatography as a lipophilicity determination tool. Part IV — A closer look on extrapolation and averaging. ACTA CHROMATOGR 2014. [DOI: 10.1556/achrom.26.2014.1.1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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15
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Giaginis C, Tsantili-Kakoulidou A. Quantitative Structure–Retention Relationships as Useful Tool to Characterize Chromatographic Systems and Their Potential to Simulate Biological Processes. Chromatographia 2012. [DOI: 10.1007/s10337-012-2374-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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16
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Tosti T, Natić M, Dabić D, Milić D, Milojković-Opsenica D, Tešić Ž. Structure-retention relationship study of polyoxygenated steroids. J Sep Sci 2012; 35:2693-8. [DOI: 10.1002/jssc.201200423] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2012] [Revised: 06/04/2012] [Accepted: 06/14/2012] [Indexed: 11/08/2022]
Affiliation(s)
- Tomislav Tosti
- Faculty of Chemistry; University of Belgrade; Belgrade Serbia
| | - Maja Natić
- Faculty of Chemistry; University of Belgrade; Belgrade Serbia
| | - Dragana Dabić
- Innovation Centre; Faculty of Chemistry Ltd; University of Belgrade; Belgrade Serbia
| | - Dragana Milić
- Faculty of Chemistry; University of Belgrade; Belgrade Serbia
| | | | - Živoslav Tešić
- Faculty of Chemistry; University of Belgrade; Belgrade Serbia
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