1
|
Wang D, Xiao H, Lv X, Chen H, Wei F. Mass Spectrometry Based on Chemical Derivatization Has Brought Novel Discoveries to Lipidomics: A Comprehensive Review. Crit Rev Anal Chem 2023; 55:21-52. [PMID: 37782560 DOI: 10.1080/10408347.2023.2261130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
Lipids, as one of the most important organic compounds in organisms, are important components of cells and participate in energy storage and signal transduction of living organisms. As a rapidly rising field, lipidomics research involves the identification and quantification of multiple classes of lipid molecules, as well as the structure, function, dynamics, and interactions of lipids in living organisms. Due to its inherent high selectivity and high sensitivity, mass spectrometry (MS) is the "gold standard" analysis technique for small molecules in biological samples. The combination chemical derivatization with MS detection is a unique strategy that could improve MS ionization efficiency, facilitate structure identification and quantitative analysis. Herein, this review discusses derivatization-based MS strategies for lipidomic analysis over the past decade and focuses on all the reported lipid categories, including fatty acids and modified fatty acids, glycerolipids, glycerophospholipids, sterols and saccharolipids. The functional groups of lipids mainly involved in chemical derivatization include the C=C group, carboxyl group, hydroxyl group, amino group, carbonyl group. Furthermore, representative applications of these derivatization-based lipid profiling methods were summarized. Finally, challenges and countermeasures of lipid derivatization are mentioned and highlighted to guide future studies of derivatization-based MS strategy in lipidomics.
Collapse
Affiliation(s)
- Dan Wang
- Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Key Laboratory of Oilseeds Processing of Ministry of Agriculture, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Wuhan, Hubei, PR China
| | - Huaming Xiao
- Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Key Laboratory of Oilseeds Processing of Ministry of Agriculture, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Wuhan, Hubei, PR China
| | - Xin Lv
- Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Key Laboratory of Oilseeds Processing of Ministry of Agriculture, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Wuhan, Hubei, PR China
| | - Hong Chen
- Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Key Laboratory of Oilseeds Processing of Ministry of Agriculture, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Wuhan, Hubei, PR China
| | - Fang Wei
- Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Key Laboratory of Oilseeds Processing of Ministry of Agriculture, Hubei Key Laboratory of Lipid Chemistry and Nutrition, Wuhan, Hubei, PR China
- Hubei Hongshan Laboratory, Wuhan, Hubei, PR China
| |
Collapse
|
2
|
Methods of Lipidomic Analysis: Extraction, Derivatization, Separation, and Identification of Lipids. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2021. [PMID: 33791982 DOI: 10.1007/978-3-030-51652-9_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register]
Abstract
Lipidomics refers to the large-scale study of pathways and networks of cellular lipids in biological systems. A lipidomic analysis often involves the identification and quantification of the thousands of cellular lipid molecular species within a complex biological sample and therefore requires a well optimized method for lipid profiling. In this chapter, the methods for lipidomic analysis, including sample collection and preparation, lipid derivatization and separation, mass spectrometric identification of lipids, data processing and interpretation, and quality control, are overviewed.
Collapse
|
3
|
Hughes CC. Chemical labeling strategies for small molecule natural product detection and isolation. Nat Prod Rep 2021; 38:1684-1705. [PMID: 33629087 DOI: 10.1039/d0np00034e] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Covering: Up to 2020.It is widely accepted that small molecule natural products (NPs) evolved to carry out a particular ecological function and that these finely-tuned molecules can sometimes be appropriated for the treatment of disease in humans. Unfortunately, for the natural products chemist, NPs did not evolve to possess favorable physicochemical properties needed for HPLC-MS analysis. The process known as derivatization, whereby an NP in a complex mixture is decorated with a nonnatural moiety using a derivatizing agent (DA), arose from this sad state of affairs. Here, NPs are freed from the limitations of natural functionality and endowed, usually with some degree of chemoselectivity, with additional structural features that make HPLC-MS analysis more informative. DAs that selectively label amines, carboxylic acids, alcohols, phenols, thiols, ketones, and aldehydes, terminal alkynes, electrophiles, conjugated alkenes, and isocyanides have been developed and will be discussed here in detail. Although usually employed for targeted metabolomics, chemical labeling strategies have been effectively applied to uncharacterized NP extracts and may play an increasing role in the detection and isolation of certain classes of NPs in the future.
Collapse
Affiliation(s)
- Chambers C Hughes
- Interfaculty Institute of Microbiology and Infection Medicine, University of Tübingen, Tübingen, Germany 72076.
| |
Collapse
|
4
|
Liquid-Chromatographic Methods for Carboxylic Acids in Biological Samples. Molecules 2020; 25:molecules25214883. [PMID: 33105855 PMCID: PMC7660098 DOI: 10.3390/molecules25214883] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Revised: 10/09/2020] [Accepted: 10/14/2020] [Indexed: 11/25/2022] Open
Abstract
Carboxyl-bearing low-molecular-weight compounds such as keto acids, fatty acids, and other organic acids are involved in a myriad of metabolic pathways owing to their high polarity and solubility in biological fluids. Various disease areas such as cancer, myeloid leukemia, heart disease, liver disease, and lifestyle diseases (obesity and diabetes) were found to be related to certain metabolic pathways and changes in the concentrations of the compounds involved in those pathways. Therefore, the quantification of such compounds provides useful information pertaining to diagnosis, pathological conditions, and disease mechanisms, spurring the development of numerous analytical methods for this purpose. This review article addresses analytical methods for the quantification of carboxylic acids, which were classified into fatty acids, tricarboxylic acid cycle and glycolysis-related compounds, amino acid metabolites, perfluorinated carboxylic acids, α-keto acids and their metabolites, thiazole-containing carboxylic acids, and miscellaneous, in biological samples from 2000 to date. Methods involving liquid chromatography coupled with ultraviolet, fluorescence, mass spectrometry, and electrochemical detection were summarized.
Collapse
|
5
|
Profiling and relative quantification of phosphatidylethanolamine based on acetone stable isotope derivatization. Anal Chim Acta 2016; 902:142-153. [DOI: 10.1016/j.aca.2015.11.003] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2015] [Revised: 10/15/2015] [Accepted: 11/02/2015] [Indexed: 12/15/2022]
|
6
|
Sakaguchi Y, Ikenaga J, Yoshida H, Hayama T, Itoyama M, Todoroki K, Imakyure O, Yamaguchi M, Nohta H. Selective and sensitive liquid chromatographic determination method of 5-hydroxyindoles with fluorous and fluorogenic derivatization. J Pharm Biomed Anal 2015; 114:348-54. [DOI: 10.1016/j.jpba.2015.06.003] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2015] [Revised: 06/01/2015] [Accepted: 06/03/2015] [Indexed: 10/23/2022]
|
7
|
Huang Z, Ni C, Zhu Z, Pan Z, Wang L, Zhu Y. Analysis of trace inorganic anions in weak acid salts by single pump cycling-column-switching ion chromatography. J Sep Sci 2015; 38:1294-300. [DOI: 10.1002/jssc.201401366] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2014] [Revised: 01/19/2015] [Accepted: 01/22/2015] [Indexed: 11/12/2022]
Affiliation(s)
- Zhongping Huang
- College of Chemical Engineering; Zhejiang University of Technology; Hangzhou Zhejiang P. R. China
| | - Chengzhu Ni
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou Zhejiang P. R. China
| | - Zhuyi Zhu
- Institute of Quality and Standard for Agricultural Products; Zhejiang Academy of Agricultural Sciences; Hangzhou P. R. China
| | - Zaifa Pan
- College of Chemical Engineering; Zhejiang University of Technology; Hangzhou Zhejiang P. R. China
| | - Lili Wang
- College of Chemical Engineering; Zhejiang University of Technology; Hangzhou Zhejiang P. R. China
| | - Yan Zhu
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou Zhejiang P. R. China
| |
Collapse
|
8
|
Fluorous affinity-based separation techniques for the analysis of biogenic and related molecules. J Pharm Biomed Anal 2014; 101:151-60. [DOI: 10.1016/j.jpba.2014.04.035] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2014] [Revised: 04/21/2014] [Accepted: 04/23/2014] [Indexed: 01/08/2023]
|
9
|
Todoroki K, Nakano T, Ishii Y, Goto K, Tomita R, Fujioka T, Min JZ, Inoue K, Toyo'oka T. Automatic analyzer for highly polar carboxylic acids based on fluorescence derivatization-liquid chromatography. Biomed Chromatogr 2014; 29:445-51. [DOI: 10.1002/bmc.3295] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2014] [Revised: 06/05/2014] [Accepted: 06/23/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Kenichiro Todoroki
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| | - Tatsuki Nakano
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| | - Yasuhiro Ishii
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| | - Kanoko Goto
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| | - Ryoko Tomita
- Faculty of Pharmaceutical Sciences; Fukuoka University; 8-19-1 Nanakuma, Johnan-ku Fukuoka 814-0180 Japan
| | - Toshihiro Fujioka
- Faculty of Pharmaceutical Sciences; Fukuoka University; 8-19-1 Nanakuma, Johnan-ku Fukuoka 814-0180 Japan
| | - Jun Zhe Min
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| | - Koichi Inoue
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| | - Toshimasa Toyo'oka
- Laboratory of Analytical and Bio-Analytical Chemistry, School of Pharmaceutical Sciences; University of Shizuoka; 52-1 Yada, Suruga-ku Shizuoka 422-8526 Japan
| |
Collapse
|
10
|
Qi BL, Liu P, Wang QY, Cai WJ, Yuan BF, Feng YQ. Derivatization for liquid chromatography-mass spectrometry. Trends Analyt Chem 2014. [DOI: 10.1016/j.trac.2014.03.013] [Citation(s) in RCA: 155] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
11
|
Huang Z, Ni C, Wang F, Zhu Z, Subhani Q, Wang M, Zhu Y. Simultaneous determination of peroxydisulfate and conventional inorganic anions by ion chromatography with the column-switching technique. J Sep Sci 2013; 37:198-203. [DOI: 10.1002/jssc.201300583] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2013] [Revised: 10/24/2013] [Accepted: 11/12/2013] [Indexed: 11/11/2022]
Affiliation(s)
- Zhongping Huang
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou China
| | - Chengzhu Ni
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou China
| | - Fengli Wang
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou China
| | - Zuoyi Zhu
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou China
| | - Qamar Subhani
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou China
| | - Muhua Wang
- Department of Chemistry; Lishui University; Lishui China
| | - Yan Zhu
- Department of Chemistry; Xixi Campus; Zhejiang University; Hangzhou China
| |
Collapse
|
12
|
Dress-up chiral columns for the enantioseparation of amino acids based on fluorous separation. Anal Bioanal Chem 2013; 405:8121-9. [DOI: 10.1007/s00216-013-7207-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2013] [Revised: 06/28/2013] [Accepted: 07/02/2013] [Indexed: 11/28/2022]
|