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Berndt T, Scholz W, Mentler B, Fischer L, Hoffmann EH, Tilgner A, Hyttinen N, Prisle NL, Hansel A, Herrmann H. Fast Peroxy Radical Isomerization and OH Recycling in the Reaction of OH Radicals with Dimethyl Sulfide. J Phys Chem Lett 2019; 10:6478-6483. [PMID: 31589452 DOI: 10.1021/acs.jpclett.9b02567] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Dimethyl sulfide (DMS), produced by marine organisms, represents the most abundant, biogenic sulfur emission into the Earth's atmosphere. The gas-phase degradation of DMS is mainly initiated by the reaction with the OH radical forming first CH3SCH2O2 radicals from the dominant H-abstraction channel. It is experimentally shown that these peroxy radicals undergo a two-step isomerization process finally forming a product consistent with the formula HOOCH2SCHO. The isomerization process is accompanied by OH recycling. The rate-limiting first isomerization step, CH3SCH2O2 → CH2SCH2OOH, followed by O2 addition, proceeds with k = (0.23 ± 0.12) s-1 at 295 ± 2 K. Competing bimolecular CH3SCH2O2 reactions with NO, HO2, or RO2 radicals are less important for trace-gas conditions over the oceans. Results of atmospheric chemistry simulations demonstrate the predominance (≥95%) of CH3SCH2O2 isomerization. The rapid peroxy radical isomerization, not yet considered in models, substantially changes the understanding of DMS's degradation processes in the atmosphere.
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Affiliation(s)
- T Berndt
- Atmospheric Chemistry Department (ACD) , Leibniz Institute for Tropospheric Research (TROPOS) , 04318 Leipzig , Germany
| | - W Scholz
- Institute for Ion Physics and Applied Physics , University of Innsbruck , 6020 Innsbruck , Austria
- IONICON Analytik GmbH , 6020 Innsbruck , Austria
| | - B Mentler
- Institute for Ion Physics and Applied Physics , University of Innsbruck , 6020 Innsbruck , Austria
| | - L Fischer
- Institute for Ion Physics and Applied Physics , University of Innsbruck , 6020 Innsbruck , Austria
| | - E H Hoffmann
- Atmospheric Chemistry Department (ACD) , Leibniz Institute for Tropospheric Research (TROPOS) , 04318 Leipzig , Germany
| | - A Tilgner
- Atmospheric Chemistry Department (ACD) , Leibniz Institute for Tropospheric Research (TROPOS) , 04318 Leipzig , Germany
| | - N Hyttinen
- Nano and Molecular Systems Research Unit , University of Oulu , 90014 Oulu , Finland
| | - N L Prisle
- Nano and Molecular Systems Research Unit , University of Oulu , 90014 Oulu , Finland
| | - A Hansel
- Institute for Ion Physics and Applied Physics , University of Innsbruck , 6020 Innsbruck , Austria
- IONICON Analytik GmbH , 6020 Innsbruck , Austria
| | - H Herrmann
- Atmospheric Chemistry Department (ACD) , Leibniz Institute for Tropospheric Research (TROPOS) , 04318 Leipzig , Germany
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Sandhiya L, Kolandaivel P, Senthilkumar K. Reaction mechanism and kinetics of the atmospheric oxidation of 1,4-thioxane by NO3 — A theoretical study. CAN J CHEM 2012. [DOI: 10.1139/v2012-010] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Volatile organic compounds (VOCs) are emitted as pollutants into the atmosphere from many natural and artificial sources. The oxidation of VOCs by atmospheric species plays a key role in the degradation of VOCs. In the present investigation, the atmospheric degradation of a cyclic organosulfur compound, 1,4-thioxane, by an NO3• radical is studied. Pathways for the reaction of 1,4-thioxane with the NO3• radical were modeled through electronic structure calculations using density functional theory methods B3LYP, M06-2X, and MP2 with the 6–31G(d,p) basis set. The NO3•-initiated reaction of 1,4-thioxane was found to proceed in three ways: by single-hydrogen atom abstraction, by direct transfer of the O atom of NO3• to the S atom moiety of 1,4-thioxane, or by two-hydrogen atom transfer reactions leading to the formation of a peroxy radical intermediate, which further undergoes secondary reactions with other atmospheric species. Structures, energies, and vibrational frequencies obtained from M06-2X/6–31G(d,p) electronic structure calculations were subsequently used to perform canonical variational transition-state theory calculations to determine the rate constants over the temperature range of 278–350 K and to study the lifetime of 1,4-thioxane in the atmosphere. The rate constant calculated for the reaction of 1,4-thioxane with the NO3• radical is in good agreement with the available experimental data.
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Affiliation(s)
- L. Sandhiya
- Department of Physics, Bharathiar University, Coimbatore - 641 046, India
| | - P. Kolandaivel
- Department of Physics, Bharathiar University, Coimbatore - 641 046, India
| | - K. Senthilkumar
- Department of Physics, Bharathiar University, Coimbatore - 641 046, India
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Theoretical studies on the reaction mechanism and kinetics of the atmospheric reactions of 1,4-thioxane with OH radical. Struct Chem 2012. [DOI: 10.1007/s11224-012-9955-8] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Aschmann SM, Long WD, Atkinson R. Kinetics of the Gas-Phase Reactions of OH and NO3 Radicals and O3 with 1,4-Thioxane and 1,4-Dithiane. J Phys Chem A 2008; 112:13556-65. [DOI: 10.1021/jp8074018] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Sara M. Aschmann
- Air Pollution Research Center, Department of Environmental Sciences and Department of Chemistry, University of California, Riverside, California 92521
| | - William D. Long
- Air Pollution Research Center, Department of Environmental Sciences and Department of Chemistry, University of California, Riverside, California 92521
| | - Roger Atkinson
- Air Pollution Research Center, Department of Environmental Sciences and Department of Chemistry, University of California, Riverside, California 92521
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Jee J, Tao FM. Reaction Mechanisms and Kinetics for the Oxidations of Dimethyl Sulfide, Dimethyl Disulfide, and Methyl Mercaptan by the Nitrate Radical. J Phys Chem A 2006; 110:7682-9. [PMID: 16774215 DOI: 10.1021/jp0566717] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
This study examines the initial oxidation routes of the three major reduced sulfur compounds (CH(3)SH, CH(3)SCH(3), and CH(3)SSCH(3)) by the nitrate radical using density functional and ab initio methods. Stationary points along each reaction pathway are examined using different levels of theory and basis sets to ensure the convergence of the results. Kinetics calculations follow on the determined reaction pathways to obtain the rate constants. This study shows that sulfur compounds exhibit a general trend of hydrogen abstraction following the formation of an initial sulfur-nitrate complex. The results are in agreement with experimental work on CH(3)SCH(3) and CH(3)SH, while refuting a proposal of several previous studies that oxygen addition is the dominant oxidation pathway in the case of CH(3)SSCH(3). The rate constants obtained from kinetics calculations are consistent with experimental findings and exhibit negative temperature dependence. Overall, this study confirms the importance of nitrate in the oxidation of reduced sulfur compounds in the atmosphere.
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Affiliation(s)
- Justin Jee
- Department of Chemistry and Biochemistry, California State University, Fullerton, 92834, USA
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Nakano Y, Ishiwata T, Aloisio S, Kawasaki M. Temperature and Pressure Dependence of the Rate Constants of the Reaction of NO3 Radical with CH3SCH3. J Phys Chem A 2006; 110:7401-5. [PMID: 16759128 DOI: 10.1021/jp0612230] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The reaction of nitrate radical with dimethyl sulfide was studied with cavity ring-down spectroscopy in 20-200 Torr of N2 diluent in the temperature range of 283-318 K. The rate constant for this reaction, k(1), is found to be temperature dependent and pressure independent: k1 = 4.5(-2.8)(+4.0) x 10(-13) exp[(310 +/- 220)/T] cm3 molecule(-1) s(-1). The uncertainties are two standard deviations from regression analyses. The present rate constants are in good agreement with those reported by Daykin and Wine (Int. J. Chem. Kinet. 1990, 22, 1083) and may be used in the atmospheric model calculation. Theoretical calculations were carried out to verify the existence of an intermediate complex.
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Affiliation(s)
- Yukio Nakano
- Faculty of Information Sciences, Hiroshima City University, Hiroshima 731-3194, Japan.
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Jee J, Tao FM. Reaction mechanism and kinetics for the oxidation of dimethyl sulfide by nitrate radical. Chem Phys Lett 2006. [DOI: 10.1016/j.cplett.2006.01.006] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Barnes I, Hjorth J, Mihalopoulos N. Dimethyl Sulfide and Dimethyl Sulfoxide and Their Oxidation in the Atmosphere. Chem Rev 2006; 106:940-75. [PMID: 16522014 DOI: 10.1021/cr020529+] [Citation(s) in RCA: 207] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ian Barnes
- Bergische Universität Wuppertal, FB C-Physikalische Chemie, Gauss Strasse 20, 42119 Wuppertal, Germany
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Nakano Y, Ishiwata T, Kawasaki M. Rate Constants of the Reaction of NO3 with CH3I Measured with Use of Cavity Ring-Down Spectroscopy. J Phys Chem A 2005; 109:6527-31. [PMID: 16833998 DOI: 10.1021/jp051817n] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We have applied cavity ring-down spectroscopy to a kinetic study of the reaction of NO3 with CH3I in 20-200 Torr of N2 diluent at 298 K. The rate constant of the reaction of NO3 + CH3I was determined to be (4.1 +/- 0.2) x 10(-13) cm3 molecule(-1) s(-1) in 100 Torr of N2 diluent at 298 K and is pressure-independent. This reaction may significantly contribute to the formation of reactive iodine compounds in the atmosphere.
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Affiliation(s)
- Yukio Nakano
- Faculty of Information Sciences, Hiroshima City University, Hiroshima 731-3194, Japan.
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Gravestock T, Blitz MA, Heard DE. Kinetics study of the reaction of iodine monoxide radicals with dimethyl sulfide. Phys Chem Chem Phys 2005; 7:2173-81. [DOI: 10.1039/b502989a] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Harry C, Arey J, Atkinson R. Rate constants for the reactions of OH radicals and Cl atoms with Di-n-Propyl ether and Di-n-Butyl ether and their deuterated analogs. INT J CHEM KINET 1999. [DOI: 10.1002/(sici)1097-4601(1999)31:6<425::aid-kin4>3.0.co;2-c] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Whung PY, Saltzman ES, Spencer MJ, Mayewski PA, Gundestrup N. Two-hundred-year record of biogenic sulfur in a south Greenland ice core (20D). ACTA ACUST UNITED AC 1994. [DOI: 10.1029/93jd02732] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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13
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Jensen NR, Hjorth J, Lohse C, Skov H, Restelli G. Reactions of the nitrate radical with a series of reduced organic sulphur compounds in air. INT J CHEM KINET 1992. [DOI: 10.1002/kin.550241002] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Wayne R, Barnes I, Biggs P, Burrows J, Canosa-Mas C, Hjorth J, Le Bras G, Moortgat G, Perner D, Poulet G, Restelli G, Sidebottom H. The nitrate radical: Physics, chemistry, and the atmosphere. ACTA ACUST UNITED AC 1991. [DOI: 10.1016/0960-1686(91)90192-a] [Citation(s) in RCA: 470] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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