Synthetic CT generation based on CBCT using respath-cycleGAN

Energy-guided diffusion model for CBCT-to-CT synthesis

Cone Beam Computed Tomography (CBCT) plays a crucial role in Image-Guided Radiation Therapy (IGRT), providing essential assurance of accuracy in radiation treatment by monitoring changes in anatomical structures during the treatment process. However, CBCT images often face interference from scatter noise and artifacts, posing a significant challenge when relying solely on CBCT for precise dose calculation and accurate tissue localization. There is an urgent need to enhance the quality of CBCT images, enabling a more practical application in IGRT. This study introduces EGDiff, a novel framework based on the diffusion model, designed to address the challenges posed by scatter noise and artifacts in CBCT images. In our approach, we employ a forward diffusion process by adding Gaussian noise to CT images, followed by a reverse denoising process using ResUNet with an attention mechanism to predict noise intensity, ultimately synthesizing CBCT-to-CT images. Additionally, we design an energy-guided function to retain domain-independent features and discard domain-specific features during the denoising process, enhancing the effectiveness of CBCT-CT generation. We conduct numerous experiments on the thorax dataset and pancreas dataset. The results demonstrate that EGDiff performs better on the thoracic tumor dataset with SSIM of 0.850, MAE of 26.87 HU, PSNR of 19.83 dB, and NCC of 0.874. EGDiff outperforms SoTA CBCT-to-CT synthesis methods on the pancreas dataset with SSIM of 0.754, MAE of 32.19 HU, PSNR of 19.35 dB, and NCC of 0.846. By improving the accuracy and reliability of CBCT images, EGDiff can enhance the precision of radiation therapy, minimize radiation exposure to healthy tissues, and ultimately contribute to more effective and personalized cancer treatment strategies.

A systematic literature review: deep learning techniques for synthetic medical image generation and their applications in radiotherapy

The aim of this systematic review is to determine whether Deep Learning (DL) algorithms can provide a clinically feasible alternative to classic algorithms for synthetic Computer Tomography (sCT). The following categories are presented in this study: ∙ MR-based treatment planning and synthetic CT generation techniques. ∙ Generation of synthetic CT images based on Cone Beam CT images. ∙ Low-dose CT to High-dose CT generation. ∙ Attenuation correction for PET images. To perform appropriate database searches, we reviewed journal articles published between January 2018 and June 2023. Current methodology, study strategies, and results with relevant clinical applications were analyzed as we outlined the state-of-the-art of deep learning based approaches to inter-modality and intra-modality image synthesis. This was accomplished by contrasting the provided methodologies with traditional research approaches. The key contributions of each category were highlighted, specific challenges were identified, and accomplishments were summarized. As a final step, the statistics of all the cited works from various aspects were analyzed, which revealed that DL-based sCTs have achieved considerable popularity, while also showing the potential of this technology. In order to assess the clinical readiness of the presented methods, we examined the current status of DL-based sCT generation.

Pseudo-medical image-guided technology based on 'CBCT-only' mode in esophageal cancer radiotherapy

Purpose To minimize the various errors introduced by image-guided radiotherapy (IGRT) in the application of esophageal cancer treatment, this study proposes a novel technique based on the 'CBCT-only' mode of pseudo-medical image guidance. Methods The framework of this technology consists of two pseudo-medical image synthesis models in the CBCT→CT and the CT→PET direction. The former utilizes a dual-domain parallel deep learning model called AWM-PNet, which incorporates attention waning mechanisms. This model effectively suppresses artifacts in CBCT images in both the sinogram and spatial domains while efficiently capturing important image features and contextual information. The latter leverages tumor location and shape information provided by clinical experts. It introduces a PRAM-GAN model based on a prior region aware mechanism to establish a non-linear mapping relationship between CT and PET image domains.  As a result, it enables the generation of pseudo-PET images that meet the clinical requirements for radiotherapy. Results The NRMSE and multi-scale SSIM (MS-SSIM) were utilized to evaluate the test set, and the results were presented as median values with lower quartile and upper quartile ranges. For the AWM-PNet model, the NRMSE and MS-SSIM values were 0.0218 (0.0143, 0.0255) and 0.9325 (0.9141, 0.9410), respectively. The PRAM-GAN model produced NRMSE and MS-SSIM values of 0.0404 (0.0356, 0.0476) and 0.9154 (0.8971, 0.9294), respectively. Statistical analysis revealed significant differences (p < 0.05) between these models and others. The numerical results of dose metrics, including D98 %, Dmean, and D2 %, validated the accuracy of HU values in the pseudo-CT images synthesized by the AWM-PNet. Furthermore, the Dice coefficient results confirmed statistically significant differences (p < 0.05) in GTV delineation between the pseudo-PET images synthesized using the PRAM-GAN model and other compared methods. Conclusion The AWM-PNet and PRAM-GAN models have the capability to generate accurate pseudo-CT and pseudo-PET images, respectively. The pseudo-image-guided technique based on the 'CBCT-only' mode shows promising prospects for application in esophageal cancer radiotherapy.

Generating synthetic images from cone beam computed tomography using self-attention residual UNet for head and neck radiotherapy

Background and purpose

Accurate CT numbers in Cone Beam CT (CBCT) are crucial for precise dose calculations in adaptive radiotherapy (ART). This study aimed to generate synthetic CT (sCT) from CBCT using deep learning (DL) models in head and neck (HN) radiotherapy.

Materials and methods

A novel DL model, the 'self-attention-residual-UNet' (ResUNet), was developed for accurate sCT generation. ResUNet incorporates a self-attention mechanism in its long skip connections to enhance information transfer between the encoder and decoder. Data from 93 HN patients, each with planning CT (pCT) and first-day CBCT images were used. Model performance was evaluated using two DL approaches (non-adversarial and adversarial training) and two model types (2D axial only vs. 2.5D axial, sagittal, and coronal). ResUNet was compared with the traditional UNet through image quality assessment (Mean Absolute Error (MAE), Peak-Signal-to-Noise Ratio (PSNR), Structural Similarity Index (SSIM)) and dose calculation accuracy evaluation (DVH deviation and gamma evaluation (1 %/1mm)).

Results

Image similarity evaluation results for the 2.5D-ResUNet and 2.5D-UNet models were: MAE: 46±7 HU vs. 51±9 HU, PSNR: 66.6±2.0 dB vs. 65.8±1.8 dB, and SSIM: 0.81±0.04 vs. 0.79±0.05. There were no significant differences in dose calculation accuracy between DL models. Both models demonstrated DVH deviation below 0.5 % and a gamma-pass-rate (1 %/1mm) exceeding 97 %.

Conclusions

ResUNet enhanced CT number accuracy and image quality of sCT and outperformed UNet in sCT generation from CBCT. This method holds promise for generating precise sCT for HN ART.

Using RegGAN to generate synthetic CT images from CBCT images acquired with different linear accelerators

BACKGROUND

The goal was to investigate the feasibility of the registration generative adversarial network (RegGAN) model in image conversion for performing adaptive radiation therapy on the head and neck and its stability under different cone beam computed tomography (CBCT) models.

METHODS

A total of 100 CBCT and CT images of patients diagnosed with head and neck tumors were utilized for the training phase, whereas the testing phase involved 40 distinct patients obtained from four different linear accelerators. The RegGAN model was trained and tested to evaluate its performance. The generated synthetic CT (sCT) image quality was compared to that of planning CT (pCT) images by employing metrics such as the mean absolute error (MAE), peak signal-to-noise ratio (PSNR), and structural similarity index measure (SSIM). Moreover, the radiation therapy plan was uniformly applied to both the sCT and pCT images to analyze the planning target volume (PTV) dose statistics and calculate the dose difference rate, reinforcing the model's accuracy.

RESULTS

The generated sCT images had good image quality, and no significant differences were observed among the different CBCT modes. The conversion effect achieved for Synergy was the best, and the MAE decreased from 231.3 ± 55.48 to 45.63 ± 10.78; the PSNR increased from 19.40 ± 1.46 to 26.75 ± 1.32; the SSIM increased from 0.82 ± 0.02 to 0.85 ± 0.04. The quality improvement effect achieved for sCT image synthesis based on RegGAN was obvious, and no significant sCT synthesis differences were observed among different accelerators.

CONCLUSION

The sCT images generated by the RegGAN model had high image quality, and the RegGAN model exhibited a strong generalization ability across different accelerators, enabling its outputs to be used as reference images for performing adaptive radiation therapy on the head and neck.

Clinical evaluation of synthetic computed tomography methods in adaptive proton therapy of lung cancer patients

Background and purpose

Efficient workflows for adaptive proton therapy are of high importance. This study evaluated the possibility to replace repeat-CTs (reCTs) with synthetic CTs (sCTs), created based on cone-beam CTs (CBCTs), for flagging the need of plan adaptations in intensity-modulated proton therapy (IMPT) treatment of lung cancer patients.

Materials and methods

Forty-two IMPT patients were retrospectively included. For each patient, one CBCT and a same-day reCT were included. Two commercial sCT methods were applied; one based on CBCT number correction (Cor-sCT), and one based on deformable image registration (DIR-sCT). The clinical reCT workflow (deformable contour propagation and robust dose re-computation) was performed on the reCT as well as the two sCTs. The deformed target contours on the reCT/sCTs were checked by radiation oncologists and edited if needed. A dose-volume-histogram triggered plan adaptation method was compared between the reCT and the sCTs; patients needing a plan adaptation on the reCT but not on the sCT were denoted false negatives. As secondary evaluation, dose-volume-histogram comparison and gamma analysis (2%/2mm) were performed between the reCT and sCTs.

Results

There were five false negatives, two for Cor-sCT and three for DIR-sCT. However, three of these were only minor, and one was caused by tumour position differences between the reCT and CBCT and not by sCT quality issues. An average gamma pass rate of 93% was obtained for both sCT methods.

Conclusion

Both sCT methods were judged to be of clinical quality and valuable for reducing the amount of reCT acquisitions.

Structure-preserving quality improvement of cone beam CT images using contrastive learning

Cone-beam CT (CBCT) is widely used in dental clinics but exhibits limitations in assessing soft tissue pathology because of its lack of contrast resolution and low Hounsfield Units (HU) quantification accuracy. We aimed to increase the image quality and HU accuracy of CBCTs while preserving anatomical structures. We generated CT-like images from CBCT images using a patchwise contrastive learning-based GAN model. Our model was trained on unpaired CT and CBCT datasets with the novel combination of losses and the feature extractor pretrained on our training dataset. We evaluated the quality of the images generated by our model in terms of Fréchet inception distance (FID), peak signal-to-noise ratio (PSNR), mean absolute error (MAE), and root mean square error (RMSE). Additionally, the structure preservation performance was assessed by the structure score. As a result, the generated CT-like images by our model were significantly superior to those generated by various baseline models in terms of FID, PSNR, MAE, RMSE, and structure score. Therefore, we demonstrated that our model provided the complementary benefits of preserving the anatomical structures of the input CBCT images and improving the image quality to be similar to those of CT images.

Improving synthetic CT accuracy by combining the benefits of multiple normalized preprocesses

PURPOSE

To investigate the effect of different normalization preprocesses in deep learning on the accuracy of different tissues in synthetic computed tomography (sCT) and to combine their advantages to improve the accuracy of all tissues.

METHODS

The cycle-consistent adversarial network (CycleGAN) model was used to generate sCT images from megavolt cone-beam CT (MVCBCT) images. In this study, 2639 head MVCBCT and CT image pairs from 203 patients were collected as a training set, and 249 image pairs from 29 patients were collected as a test set. We normalized the voxel values in images to 0 to 1 or -1 to 1, using two linear and five nonlinear normalization preprocessing methods to obtain seven data sets and compared the accuracy of different tissues in different sCT obtained from training these data. Finally, to combine the advantages of different normalization preprocessing methods, we obtained sCT_Blur by cropping, stitching, and smoothing (OpenCV's cv2.medianBlur, kernel size 5) each group of sCTs and evaluated its image quality and accuracy of OARs.

RESULTS

Different normalization preprocesses made sCT more accurate in different tissues. The proposed sCT_Blur took advantage of multiple normalization preprocessing methods, and all tissues are more accurate than the sCT obtained using a single conventional normalization method. Compared with other sCT images, the structural similarity of sCT_Blur versus CT was improved to 0.906 ± 0.019. The mean absolute errors of the CT numbers were reduced to 15.7 ± 4.1 HU, 23.2 ± 7.1 HU, 11.5 ± 4.1 HU, 212.8 ± 104.6 HU, 219.4 ± 35.1 HU, and 268.8 ± 88.8 HU for the oral cavity, parotid, spinal cord, cavity, mandible, and teeth, respectively.

CONCLUSION

The proposed approach combined the advantages of several normalization preprocessing methods to improve the accuracy of all tissues in sCT images, which is promising for improving the accuracy of dose calculations based on CBCT images in adaptive radiotherapy.

Generation and Evaluation of Synthetic Computed Tomography (CT) from Cone-Beam CT (CBCT) by Incorporating Feature-Driven Loss into Intensity-Based Loss Functions in Deep Convolutional Neural Network

Simple Summary

Despite numerous benefits of cone-beam computed tomography (CBCT), its applications to radiotherapy were limited mainly due to degraded image quality. Recently, enhancing the CBCT image quality by generating synthetic CT image by deep convolutional neural network (CNN) has become frequent. Most of the previous works, however, generated synthetic CT with simple, classical intensity-driven loss in network training, while not specifying a full-package of verifications. This work trained the network by combining feature- and intensity-driven losses and attempted to demonstrate clinical relevance of the synthetic CT images by assessing both image similarity and dose calculating accuracy throughout a commercial Monte-Carlo.

Abstract

Deep convolutional neural network (CNN) helped enhance image quality of cone-beam computed tomography (CBCT) by generating synthetic CT. Most of the previous works, however, trained network by intensity-based loss functions, possibly undermining to promote image feature similarity. The verifications were not sufficient to demonstrate clinical applicability, either. This work investigated the effect of variable loss functions combining feature- and intensity-driven losses in synthetic CT generation, followed by strengthening the verification of generated images in both image similarity and dosimetry accuracy. The proposed strategy highlighted the feature-driven quantification in (1) training the network by perceptual loss, besides L1 and structural similarity (SSIM) losses regarding anatomical similarity, and (2) evaluating image similarity by feature mapping ratio (FMR), besides conventional metrics. In addition, the synthetic CT images were assessed in terms of dose calculating accuracy by a commercial Monte-Carlo algorithm. The network was trained with 50 paired CBCT-CT scans acquired at the same CT simulator and treatment unit to constrain environmental factors any other than loss functions. For 10 independent cases, incorporating perceptual loss into L1 and SSIM losses outperformed the other combinations, which enhanced FMR of image similarity by 10%, and the dose calculating accuracy by 1–2% of gamma passing rate in 1%/1mm criterion.