1
|
Yamasaki K, Yamasaki T, Takahashi M, Suematsu H. A mixing microfluidic chip for real-time NMR monitoring of macromolecular reaction. J Biochem 2021; 170:363-368. [PMID: 33831188 DOI: 10.1093/jb/mvab048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 04/02/2021] [Indexed: 11/12/2022] Open
Abstract
NMR spectroscopy permits real-time monitoring of reactions that involve changes in the spectra of reactants. MICCS (MIcro Channeled Cell for Synthesis monitoring) is a microfluidic chip for such purposes, which is used to rapidly activate reactions by mixing the reactant solutions in the chip inserted into the typical NMR tube. Although it allows monitoring of chemical reactions of small compounds, its simple mixing system dependent on diffusion in the microchannel was not suitable for macromolecules such as proteins with low diffusion rates. Here we developed a new microfluidic chip based on MICCS by incorporating a mixer of split-and-recombination type within the microchannel. We applied it to monitoring of the protein-folding reaction in a stopped-flow mode. A solution of denaturant-unfolded RNase A was injected from a syringe pump into the microchip set inside the NMR magnet and mixed with a buffer for dilution to reach the folding condition. Immediately after dilution, the reaction was initiated and detected by a series of NMR measurements that were synchronized with activation and inactivation of the pump. The process was repeated for accumulation of the data. By analyzing the change of the spectra by factor analysis, a kinetic constant of 0.57 min-1 was obtained.
Collapse
Affiliation(s)
- Kazuhiko Yamasaki
- Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 3058566, Japan
| | - Tomoko Yamasaki
- Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 3058566, Japan
| | - Masaharu Takahashi
- Planning Headquarters, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba, Ibaraki, 3058560, Japan
| | - Hiroto Suematsu
- JEOL RESONANCE Inc., 3-1-2 Musashino, Akishima, Tokyo, 1968558, Japan
| |
Collapse
|
2
|
Bornemann M, Kern S, Jurtz N, Thiede T, Kraume M, Maiwald M. Design and Validation of an Additively Manufactured Flow Cell–Static Mixer Combination for Inline NMR Spectroscopy. Ind Eng Chem Res 2019. [DOI: 10.1021/acs.iecr.9b03746] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Martin Bornemann
- Bundesanstalt für Materialforschung und -prüfung (BAM), Richard-Willstätter-Str. 11, 12489 Berlin, Germany
- Technische Universität Berlin, Fachgebiet Verfahrenstechnik, FH 6-1, Fraunhofer Straße 33−36, 10587 Berlin, Germany
| | - Simon Kern
- Bundesanstalt für Materialforschung und -prüfung (BAM), Richard-Willstätter-Str. 11, 12489 Berlin, Germany
| | - Nico Jurtz
- Technische Universität Berlin, Fachgebiet Verfahrenstechnik, FH 6-1, Fraunhofer Straße 33−36, 10587 Berlin, Germany
| | - Tobias Thiede
- Bundesanstalt für Materialforschung und -prüfung (BAM), Unter den Eichen 87, 12205 Berlin, Germany
| | - Matthias Kraume
- Technische Universität Berlin, Fachgebiet Verfahrenstechnik, FH 6-1, Fraunhofer Straße 33−36, 10587 Berlin, Germany
| | - Michael Maiwald
- Bundesanstalt für Materialforschung und -prüfung (BAM), Richard-Willstätter-Str. 11, 12489 Berlin, Germany
| |
Collapse
|
3
|
Giraudeau P, Felpin FX. Flow reactors integrated with in-line monitoring using benchtop NMR spectroscopy. REACT CHEM ENG 2018. [DOI: 10.1039/c8re00083b] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
The state-of-the-art flow reactors integrated with in-line benchtop NMR are thoroughly discussed with highlights on the strengths and weaknesses of this emerging technology.
Collapse
Affiliation(s)
- Patrick Giraudeau
- UFR des Sciences et des Techniques
- CNRS UMR 6230
- CEISAM
- Université de Nantes
- 44322 Nantes Cedex 3
| | - François-Xavier Felpin
- UFR des Sciences et des Techniques
- CNRS UMR 6230
- CEISAM
- Université de Nantes
- 44322 Nantes Cedex 3
| |
Collapse
|
4
|
Gomez MV, de la Hoz A. NMR reaction monitoring in flow synthesis. Beilstein J Org Chem 2017; 13:285-300. [PMID: 28326137 PMCID: PMC5331343 DOI: 10.3762/bjoc.13.31] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2016] [Accepted: 02/03/2017] [Indexed: 01/06/2023] Open
Abstract
Recent advances in the use of flow chemistry with in-line and on-line analysis by NMR are presented. The use of macro- and microreactors, coupled with standard and custom made NMR probes involving microcoils, incorporated into high resolution and benchtop NMR instruments is reviewed. Some recent selected applications have been collected, including synthetic applications, the determination of the kinetic and thermodynamic parameters and reaction optimization, even in single experiments and on the μL scale. Finally, software that allows automatic reaction monitoring and optimization is discussed.
Collapse
Affiliation(s)
- M Victoria Gomez
- Área Química Orgánica, Facultad de Químicas, Universidad de Castilla-La Mancha, Avda. Camilo José Cela nº 10, E-13071 Ciudad Real, Spain and Instituto Regional de Investigación Científica Aplicada (IRICA), Avda. Camilo José Cela s/n, E-13071 Ciudad Real, Spain
| | - Antonio de la Hoz
- Área Química Orgánica, Facultad de Químicas, Universidad de Castilla-La Mancha, Avda. Camilo José Cela nº 10, E-13071 Ciudad Real, Spain and Instituto Regional de Investigación Científica Aplicada (IRICA), Avda. Camilo José Cela s/n, E-13071 Ciudad Real, Spain
| |
Collapse
|
5
|
Yamashita Y, Minami K, Saito Y, Kobayashi S. Development of a Simple Adjustable Zinc Acid/Base Hybrid Catalyst for C-C and C-O Bond-Forming and C-C Bond-Cleavage Reactions. Chem Asian J 2016; 11:2372-6. [PMID: 27400735 DOI: 10.1002/asia.201600682] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Indexed: 11/11/2022]
Abstract
A newly designed zinc Lewis acid/base hybrid catalyst was developed. By adjusting the Lewis acidity of the zinc center, aldol-type additions of 2-picolylamine Schiff base to aldehydes proceeded smoothly to afford syn-aldol adduct equivalents, trans-N,O-acetal adducts, in high yields with high selectivities. NMR experiments, including microchanneled cell for synthesis monitoring (MICCS) NMR analysis, revealed that anti-aldol adducts were formed at the initial stage of the reactions under kinetic control, but the final products were the trans-(syn)-N,O-acetal adducts that were produced through a retro-aldol process under thermodynamic control. In the whole reaction process, the zinc catalyst played three important roles: i) promotion of the aldol process (C-C bond formation), ii) cyclization process to the N,O-acetal product (C-O bond formation), and iii) retro-aldol process from the anti-aldol adduct to the syn-aldol adduct (C-C bond cleavage and C-C bond formation).
Collapse
Affiliation(s)
- Yasuhiro Yamashita
- Department of Chemistry, School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Kodai Minami
- Department of Chemistry, School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Yuki Saito
- Department of Chemistry, School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Shū Kobayashi
- Department of Chemistry, School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
| |
Collapse
|
6
|
Affiliation(s)
- Ken-ichi Yamada
- Graduate School of Pharmaceutical Sciences; Kyoto University; Kyoto Japan
| | - Kiyoshi Tomioka
- Department of Medicinal Chemistry; Faculty of Pharmaceutical Sciences; Doshisha Women's College of Liberal Arts; Kyoto Japan
| |
Collapse
|
7
|
Yue J, Schouten JC, Nijhuis TA. Integration of Microreactors with Spectroscopic Detection for Online Reaction Monitoring and Catalyst Characterization. Ind Eng Chem Res 2012. [DOI: 10.1021/ie301258j] [Citation(s) in RCA: 98] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Jun Yue
- Laboratory of Chemical Reactor Engineering, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology,
P.O. Box 513, 5600 MB Eindhoven, The Netherlands
| | - Jaap C. Schouten
- Laboratory of Chemical Reactor Engineering, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology,
P.O. Box 513, 5600 MB Eindhoven, The Netherlands
| | - T. Alexander Nijhuis
- Laboratory of Chemical Reactor Engineering, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology,
P.O. Box 513, 5600 MB Eindhoven, The Netherlands
| |
Collapse
|
8
|
Nakano J, Masuda K, Yamashita Y, Kobayashi S. Highly Efficient Organosuperbase-Catalyzed Mannich-type Reactions of Sulfonylimidates with Imines: Successful Use of Aliphatic Imines as Substrates and a Unique Reaction Mechanism. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201204572] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
|
9
|
Nakano J, Masuda K, Yamashita Y, Kobayashi S. Highly efficient organosuperbase-catalyzed Mannich-type reactions of sulfonylimidates with imines: successful use of aliphatic imines as substrates and a unique reaction mechanism. Angew Chem Int Ed Engl 2012; 51:9525-9. [PMID: 22930582 DOI: 10.1002/anie.201204572] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Indexed: 11/10/2022]
Affiliation(s)
- Junya Nakano
- Department of Chemistry, School of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | | | | | | |
Collapse
|
10
|
Mix A, Jutzi P, Rummel B, Hagedorn K. A Simple Double-Chamber NMR Tube for the Monitoring of Chemical Reactions by NMR Spectroscopy. Organometallics 2009. [DOI: 10.1021/om900919f] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Andreas Mix
- Department of Chemistry, University of Bielefeld, Universitätsstrasse 25, D-33615 Bielefeld, Germany
| | - Peter Jutzi
- Department of Chemistry, University of Bielefeld, Universitätsstrasse 25, D-33615 Bielefeld, Germany
| | - Britta Rummel
- Department of Chemistry, University of Bielefeld, Universitätsstrasse 25, D-33615 Bielefeld, Germany
| | - Karin Hagedorn
- Technical Office, Bütfering GmbH, Stromberger Strasse 170, D-59269 Beckum, Germany
| |
Collapse
|
11
|
Characterization of multicomponent crystal formed between indomethacin and lidocaine. Drug Dev Ind Pharm 2009; 35:843-51. [DOI: 10.1080/03639040802660489] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
|