1
|
Robertson C, Batabyal S, Whitworth D, Coban T, Smith A, Montesanto A, Lucas R, Le Gresley A. Modelling of Cetylpyridinium Chloride Availability in Complex Mixtures for the Prediction of Anti-Microbial Activity Using Diffusion Ordered Spectroscopy, Saturation Transfer Difference and 1D NMR. Pharmaceuticals (Basel) 2024; 17:1570. [PMID: 39770413 PMCID: PMC11679348 DOI: 10.3390/ph17121570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 10/25/2024] [Accepted: 11/13/2024] [Indexed: 01/11/2025] Open
Abstract
Background/Objectives: A range of NMR techniques, including diffusion ordered spectroscopy (DOSY) were used to characterise complex micelles formed by the anti-microbial cationic surfactant cetylpyridium chloride and to quantify the degree of interaction between cetylpyridium chloride and hydroxyethyl cellulose in a variety of commercially relevant formulations as a model for the disk retention assay. Methods: This NMR-derived binding information was then compared with the results of formulation analysis by traditional disk retention assay (DRA) and anti-microbial activity assays to assess the suitability of these NMR techniques for the rapid identification of formulation components that could augment or retard antimicrobial activity DRA. Results: NMR showed a strong ability to predict anti-microbial activity for a diverse range of formulations containing cetylpyridinium chloride (CPC). Conclusions: This demonstrates the value of this NMR-based approach as a rapid, relatively non-destructive method for screening commercial experimental anti-microbial formulations for efficacy and further helps to understand the interplay of excipients and active ingredients.
Collapse
Affiliation(s)
- Cameron Robertson
- Department of Chemical and Pharmaceutical Sciences, Faculty of HSSCE, Kingston University, Kingston-upon-Thames KT1 2EE, UK; (T.C.); (A.L.G.)
| | - Sayoni Batabyal
- Haleon, Weybridge KT13 0NY, UK; (S.B.); (D.W.); (A.S.); (A.M.); (R.L.)
| | - Darren Whitworth
- Haleon, Weybridge KT13 0NY, UK; (S.B.); (D.W.); (A.S.); (A.M.); (R.L.)
| | - Tomris Coban
- Department of Chemical and Pharmaceutical Sciences, Faculty of HSSCE, Kingston University, Kingston-upon-Thames KT1 2EE, UK; (T.C.); (A.L.G.)
| | - Angharad Smith
- Haleon, Weybridge KT13 0NY, UK; (S.B.); (D.W.); (A.S.); (A.M.); (R.L.)
| | | | - Robert Lucas
- Haleon, Weybridge KT13 0NY, UK; (S.B.); (D.W.); (A.S.); (A.M.); (R.L.)
| | - Adam Le Gresley
- Department of Chemical and Pharmaceutical Sciences, Faculty of HSSCE, Kingston University, Kingston-upon-Thames KT1 2EE, UK; (T.C.); (A.L.G.)
| |
Collapse
|
2
|
Matrix-Assisted 1H DOSY Applied to Flavonoid Analysis in Scutellaria baicalensis. SEPARATIONS 2022. [DOI: 10.3390/separations9120388] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Matrix-assisted diffusion-ordered spectroscopy (MA DOSY) technology enables efficient the virtual separation of components in a mixture according to their coefficients (D). In the current research, MA DOSY technology was applied for the analysis of a flavonoid mixture. To establish the method, five representative active flavonoid ingredients, including baicalein, baicalin, quercetin, puerarin and rutinum, were selected for the mixture model. The effects of the type and concentration of the matrix, solvent polarity, and nuclear magnetic resonance (NMR) experimental conditions on the resolution of the DOSY spectrum were investigated. It turned out that sodium dodecyl sulfate (SDS) showed the best performance in increasing the resolution of different analytes, which initially increased to the peak below the added amount of 9 mg, and decreased upon the addition of more SDS. In addition, the five flavonoids showed higher resolution in DMSO–d6 than in MeOD. Experimental parameters of DOSY, including the number of scans (NS), dummy scans (DS), and value of the FID data points (TD), were also optimized. Finally, the above optimized method was used for the qualitative analysis of the total flavonoid mixture extracted from Scutellaria baicalensis Georgi. A total of nine compounds were identified and confirmed by comparing them with mass spectrometry data, which further verifies the practical value of this method upon analyzing flavonoid mixtures and provides some reference significance for the follow-up research.
Collapse
|
3
|
Marcos-Ayuso G, Lledós A, Casares JA. Copper(I) activation of C-X bonds: bimolecular vs. unimolecular reaction mechanism. Chem Commun (Camb) 2022; 58:2718-2721. [PMID: 35113089 DOI: 10.1039/d1cc07027d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Experimental kinetic studies and DFT calculations show that the oxidative addition of aryl halides (Ar-X) to complexes [Cu(NHC)R] follow different paths depending on the nature of X. For X = Br a concerted addition leads to cis-[Cu(NHC)XRAr] from which the usual C-C coupled product Ar-R eliminates. However, for X = I trans-[Cu(NHC)IRAr] is formed instead, leading to the elimination of R-I in a metathesis reaction. This behaviour is accounted for by a change in the reaction mechanism for Ar-I, which involves two molecules of copper(I) complex, the second one stabilising the incipient iodide formed in the C-I breaking (oxidative addition) and C-I forming (reductive elimination) processes.
Collapse
Affiliation(s)
- Guillermo Marcos-Ayuso
- IU CINQUIMA/Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, 47011-Valladolid, Spain.
| | - Agustí Lledós
- Departament de Química, Edifici C.n, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallès, Catalonia, Spain.
| | - Juan A Casares
- IU CINQUIMA/Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, 47011-Valladolid, Spain.
| |
Collapse
|
4
|
Ma H, Luo D, Zhao Q, Liu R, Zhang Z, Hou X, Sun X, Wang Y. Crown ether and crown ether/K+ complex assisted DOSY NMR: A versatile tool for positional isomers identification in aqueous solution. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2021.117884] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
5
|
Devillers E, Chelain E, Dalvit C, Brigaud T, Pytkowicz J. (R)-α-Trifluoromethylalanine as a 19 F NMR Probe for the Monitoring of Protease Digestion of Peptides. Chembiochem 2021; 23:e202100470. [PMID: 34738292 DOI: 10.1002/cbic.202100470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 11/03/2021] [Indexed: 11/07/2022]
Abstract
Fluorinated non-natural amino acids are useful tools for improving the bioavailability of peptides but can also serve as fluorinated probes in 19 F NMR-based enzymatic assays. We report herein that the use of the non-natural α-quaternarized (R)-α-trifluoromethylalanine ((R)-α-TfmAla) provides convenient and accurate monitoring of trypsin proteolytic activity and increases resistance towards pepsin degradation.
Collapse
Affiliation(s)
- Emmanuelle Devillers
- CY Cergy Paris Université, CNRS, BIOCIS, 5 mail Gay Lussac, Neuville sur Oise, 95031, Cergy Pontoise, France.,Université Paris-Saclay, CNRS, BIOCIS, 92290, Châtenay-Malabry, France
| | - Evelyne Chelain
- CY Cergy Paris Université, CNRS, BIOCIS, 5 mail Gay Lussac, Neuville sur Oise, 95031, Cergy Pontoise, France.,Université Paris-Saclay, CNRS, BIOCIS, 92290, Châtenay-Malabry, France
| | - Claudio Dalvit
- Faculty of Science, University of Neuchatel, Avenue de Bellevaux 51, 2000, Neuchatel, Switzerland.,Present address: Lavis, Trento, Italy
| | - Thierry Brigaud
- CY Cergy Paris Université, CNRS, BIOCIS, 5 mail Gay Lussac, Neuville sur Oise, 95031, Cergy Pontoise, France.,Université Paris-Saclay, CNRS, BIOCIS, 92290, Châtenay-Malabry, France
| | - Julien Pytkowicz
- CY Cergy Paris Université, CNRS, BIOCIS, 5 mail Gay Lussac, Neuville sur Oise, 95031, Cergy Pontoise, France.,Université Paris-Saclay, CNRS, BIOCIS, 92290, Châtenay-Malabry, France
| |
Collapse
|
6
|
Szalontai G. Exchange-modified DOSY experiments. the use of chiral solvating agents and lanthanide shift reagents as matrices. NEW J CHEM 2021. [DOI: 10.1039/d1nj01920a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
(S)-BINOL and Eu(fod)3 were tried as matrices to improve DOSY performance and Dt and MW prediction power on small organic molecules.
Collapse
|
7
|
Dalvit C, Veronesi M, Vulpetti A. Fluorine NMR functional screening: from purified enzymes to human intact living cells. JOURNAL OF BIOMOLECULAR NMR 2020; 74:613-631. [PMID: 32347447 DOI: 10.1007/s10858-020-00311-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Accepted: 03/25/2020] [Indexed: 06/11/2023]
Abstract
The substrate- or cofactor-based fluorine NMR screening, also known as n-FABS (n fluorine atoms for biochemical screening), represents a powerful method for performing a direct functional assay in the search of inhibitors or enhancers of an enzymatic reaction. Although it suffers from the intrinsic low sensitivity compared to other biophysical techniques usually applied in functional assays, it has some distinctive features that makes it appealing for tackling complex chemical and biological systems. Its strengths are represented by the easy set-up, robustness, flexibility, lack of signal interference and rich information content resulting in the identification of bona fide inhibitors and reliable determination of their inhibitory strength. The versatility of the n-FABS allows its application to either purified enzymes, cell lysates or intact living cells. The principles, along with theoretical, technical and practical aspects, of the methodology are discussed. Furthermore, several applications of the technique to pharmaceutical projects are presented.
Collapse
Affiliation(s)
| | - Marina Veronesi
- D3-PharmaChemistry, Fondazione Istituto Italiano di Tecnologia, Via Morego 30, 16163, Genova, Italy
| | - Anna Vulpetti
- Global Discovery Chemistry, Novartis Institutes for Biomedical Research, 4002, Basel, Switzerland
| |
Collapse
|
8
|
Day IJ. Matrix-assisted DOSY. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2020; 116:1-18. [PMID: 32130955 DOI: 10.1016/j.pnmrs.2019.09.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Revised: 08/30/2019] [Accepted: 09/01/2019] [Indexed: 06/10/2023]
Abstract
The analysis of mixtures by NMR spectroscopy is challenging. Diffusion-ordered NMR spectroscopy enables a pseudo-separation of species based on differences in their translational diffusion coefficients. Under the right circumstances, this is a powerful technique; however, when molecules diffuse at similar rates separation in the diffusion dimension can be poor. In addition, spectral overlap also limits resolution and can make interpretation challenging. Matrix-assisted diffusion NMR seeks to improve resolution in the diffusion dimension by utilising the differential interaction of components in the mixture with an additive to the solvent. Tuning these matrix-analyte interactions allows the diffusion resolution to be optimised. This review presents the background to matrix-assisted diffusion experiments, surveys the wide range of matrices employed, including chromatographic stationary phases, surfactants and polymers, and demonstrates the current state of the art.
Collapse
Affiliation(s)
- Iain J Day
- School of Life Sciences, University of Sussex, Falmer, Brighton BN1 9QJ, UK.
| |
Collapse
|
9
|
Salome KS, Tormena CF. Enantiodiscrimination by matrix-assisted DOSY NMR. Chem Commun (Camb) 2019; 55:8611-8614. [PMID: 31281910 DOI: 10.1039/c9cc04268g] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
High-resolution NMR is an essential technique for structure determination; however, stereochemistry assignment is still an obstacle. Several methods are known to overcome this limitation but usually at high costs or using derivatizations. Here we describe the use of different solvating agents to virtually discriminate the enantiomers of 15 analytes using 1H and 19F-{1H} DOSY NMR.
Collapse
Affiliation(s)
- Kahlil Schwanka Salome
- Institute of Chemistry, University of Campinas - UNICAMP, P.O. Box 6154, 13083-970 Campinas, SP, Brazil.
| | - Cláudio Francisco Tormena
- Institute of Chemistry, University of Campinas - UNICAMP, P.O. Box 6154, 13083-970 Campinas, SP, Brazil.
| |
Collapse
|
10
|
Dalvit C, Vulpetti A. Ligand-Based Fluorine NMR Screening: Principles and Applications in Drug Discovery Projects. J Med Chem 2018; 62:2218-2244. [DOI: 10.1021/acs.jmedchem.8b01210] [Citation(s) in RCA: 86] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
| | - Anna Vulpetti
- Global Discovery Chemistry, Novartis Institutes for Biomedical Research, 4002 Basel, Switzerland
| |
Collapse
|
11
|
Hernandez-Cid A, Piekarska M, Adams R, Nilsson M, Evans R, Morris GA. Matrix-assisted diffusion-ordered NMR spectroscopy with an invisible, tuneable matrix. RSC Adv 2017. [DOI: 10.1039/c7ra00188f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Perfluorooctanoate is a useful “invisible matrix” for mixture analysis by diffusion-ordered NMR (DOSY) with pH-controlled diffusion resolution.
Collapse
Affiliation(s)
| | - M. Piekarska
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - R. W. Adams
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - M. Nilsson
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - R. Evans
- Aston Institute of Materials Research
- School of Engineering and Applied Science
- Aston University
- Birmingham
- UK
| | - G. A. Morris
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| |
Collapse
|
12
|
Pagès G, Gilard V, Martino R, Malet-Martino M. Pulsed-field gradient nuclear magnetic resonance measurements (PFG NMR) for diffusion ordered spectroscopy (DOSY) mapping. Analyst 2017; 142:3771-3796. [DOI: 10.1039/c7an01031a] [Citation(s) in RCA: 74] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The advent of Diffusion Ordered SpectroscopY (DOSY) NMR has enabled diffusion coefficients to be routinely measured and used to characterize chemical systems in solution. Indeed, DOSY NMR allows the separation of the chemical entities present in multicomponent systems and provides information on their intermolecular interactions as well as on their size and shape.
Collapse
Affiliation(s)
- G. Pagès
- INRA
- AgroResonance – UR370 Qualité des Produits Animaux
- Saint Genès Champanelle
- France
| | - V. Gilard
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| | - R. Martino
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| | - M. Malet-Martino
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| |
Collapse
|
13
|
Dal Poggetto G, Castañar L, Adams RW, Morris GA, Nilsson M. Relaxation-encoded NMR experiments for mixture analysis: REST and beer. Chem Commun (Camb) 2017; 53:7461-7464. [DOI: 10.1039/c7cc03150e] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new family of NMR experiments for mixture analysis (Relaxation-Encoded Selective TOCSY, REST) allows the extraction of component subspectra from mixtures.
Collapse
Affiliation(s)
- G. Dal Poggetto
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - L. Castañar
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - R. W. Adams
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - G. A. Morris
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| | - M. Nilsson
- School of Chemistry
- University of Manchester
- Manchester M13 9PL
- UK
| |
Collapse
|