1
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Rohmer M, Freudenberg J, Binder WH. Secondary Structures in Synthetic Poly(Amino Acids): Homo- and Copolymers of Poly(Aib), Poly(Glu), and Poly(Asp). Macromol Biosci 2022; 23:e2200344. [PMID: 36377468 DOI: 10.1002/mabi.202200344] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Revised: 11/02/2022] [Indexed: 11/16/2022]
Abstract
The secondary structure of poly(amino acids) is an excellent tool for controlling and understanding the functionality and properties of proteins. In this perspective article the secondary structures of the homopolymers of oligo- and poly-glutamic acid (Glu), aspartic acid (Asp), and α-aminoisobutyric acid (Aib) are discussed. Information on external and internal factors, such as the nature of side groups, interactions with solvents and interactions between chains is reviewed. A special focus is directed on the folding in hybrid-polymers consisting of oligo(amino acids) and synthetic polymers. Being part of the SFB TRR 102 "Polymers under multiple constraints: restricted and controlled molecular order and mobility" this overview is embedded into the cross section of protein fibrillation and supramolecular polymers. As polymer- and amino acid folding is an important step for the utilization and design of future biomolecules these principles guide to a deeper understanding of amyloid fibrillation.
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Affiliation(s)
- Matthias Rohmer
- Macromolecular Chemistry, Von-Danckelmann-Platz 4, 06120, Halle, Germany
| | - Jan Freudenberg
- Macromolecular Chemistry, Von-Danckelmann-Platz 4, 06120, Halle, Germany
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2
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Wang H, Chen Q, Geng Z, Rao J, Xiong B, Lortie F, Bernard J, Binder WH, Chen S, Zhu J. Hydrogen-bonding mediated self-assembly of amphiphilic ABA triblock copolymers into well-defined giant vesicles. Polym Chem 2021. [DOI: 10.1039/d1py01061a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A straightforward and efficient access towards the generation of well-defined giant vesicles (∼3 μm in diameters), featured by Hydrogen-bonded DAP–DAP dimerization, and the amphiphilic interactions is reported.
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Affiliation(s)
- Huiying Wang
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
| | - Qiang Chen
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
| | - Zhen Geng
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
| | - Jingyi Rao
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
| | - Bijin Xiong
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
| | - Frédéric Lortie
- Univ Lyon, INSA Lyon, CNRS, IMP UMR 5223, F-69621, Villeurbanne, France
| | - Julien Bernard
- Univ Lyon, INSA Lyon, CNRS, IMP UMR 5223, F-69621, Villeurbanne, France
| | - Wolfgang H. Binder
- Chair of Macromolecular Chemistry, Faculty of Natural Science II (Chemistry, Physics and Mathematics), Martin Luther University Halle-Wittenberg, von-Danckelmann-Platz 4, Halle (Saale) D-06120, Germany
| | - Senbin Chen
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
| | - Jintao Zhu
- Key Laboratory of Materials Chemistry for Energy Conversion and Storage, Ministry of Education (HUST), School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), Wuhan 430074, China
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3
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Zhang X, Marxsen SF, Ortmann P, Mecking S, Alamo RG. Crystallization of Long-Spaced Precision Polyacetals II: Effect of Polymorphism on Isothermal Crystallization Kinetics. Macromolecules 2020. [DOI: 10.1021/acs.macromol.0c01443] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xiaoshi Zhang
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer Street, Tallahassee, Florida 32310-6046, United States
| | - Stephanie F. Marxsen
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer Street, Tallahassee, Florida 32310-6046, United States
| | - Patrick Ortmann
- Chemical Materials Science, Department of Chemistry, University of Konstanz, Universitätsstrasse 10, Konstanz 78457, Germany
| | - Stefan Mecking
- Chemical Materials Science, Department of Chemistry, University of Konstanz, Universitätsstrasse 10, Konstanz 78457, Germany
| | - Rufina G. Alamo
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer Street, Tallahassee, Florida 32310-6046, United States
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4
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Danke V, Reimann S, Binder WH, Gupta G, Beiner M. Tuning layered superstructures in precision polymers. Sci Rep 2020; 10:12119. [PMID: 32694581 PMCID: PMC7374706 DOI: 10.1038/s41598-020-68927-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2020] [Accepted: 06/11/2020] [Indexed: 11/09/2022] Open
Abstract
An approach to influence and control layered superstructures by varying the methylene sequence length between two consecutive functional groups in linear precision polymers containing 2,6-diaminopyridine (DAP) groups is presented. Layered superstructures with repeating units involving three monomeric units along the chain direction with very high coherence lengths upto 110 nm are observed in case of shorter alkyl segments, (16 and 18 [Formula: see text] units), while more conventional layer superstructures incorporating only one monomer are found for related polymers with 20 [Formula: see text] units per methylene sequence. A building block model explaining the unusually large periodicity of three monomeric units is proposed wherein layers containing crystalline or amorphous methylene sequences occur in different combinations. Occurrence of different layered structures depending on crystallization conditions, methylene sequence length as well as functional group type is explained by a competition of H-interactions between the DAP groups and the van der Waal forces between the hydrophobic methylene groups.
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Affiliation(s)
- Varun Danke
- Fraunhofer Institute for Microstructure of Materials and Systems IMWS, Walter-Hülse-Straße 1, 06120, Halle (Saale), Germany
- Faculty of Natural Sciences II, Martin-Luther-University Halle-Wittenberg, Heinrich-Damerow-Straße 4, 06120, Halle (Saale), Germany
| | - Sophie Reimann
- Chair of Macromolecular Chemistry, Faculty of Natural Sciences II, Institute of Chemistry, Martin-Luther-University Halle-Wittenberg, 06120, Halle (Saale), Germany
| | - Wolfgang H Binder
- Chair of Macromolecular Chemistry, Faculty of Natural Sciences II, Institute of Chemistry, Martin-Luther-University Halle-Wittenberg, 06120, Halle (Saale), Germany
| | - Gaurav Gupta
- Fraunhofer Institute for Microstructure of Materials and Systems IMWS, Walter-Hülse-Straße 1, 06120, Halle (Saale), Germany.
- Faculty of Natural Sciences II, Martin-Luther-University Halle-Wittenberg, Heinrich-Damerow-Straße 4, 06120, Halle (Saale), Germany.
| | - Mario Beiner
- Fraunhofer Institute for Microstructure of Materials and Systems IMWS, Walter-Hülse-Straße 1, 06120, Halle (Saale), Germany.
- Faculty of Natural Sciences II, Martin-Luther-University Halle-Wittenberg, Heinrich-Damerow-Straße 4, 06120, Halle (Saale), Germany.
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5
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Marxsen SF, Häuβler M, Mecking S, Alamo RG. Isothermal step thickening in a long-spaced aliphatic polyester. POLYMER 2020. [DOI: 10.1016/j.polymer.2020.122282] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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6
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Shen T, Ouyang B, Qian C, Chen X. Aminolysis of ethyl acetate in continuous flow and its reaction kinetics. Chin J Chem Eng 2019. [DOI: 10.1016/j.cjche.2019.03.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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7
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Zhang X, Zuo X, Ortmann P, Mecking S, Alamo RG. Crystallization of Long-Spaced Precision Polyacetals I: Melting and Recrystallization of Rapidly Formed Crystallites. Macromolecules 2019. [DOI: 10.1021/acs.macromol.9b00922] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Xiaoshi Zhang
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer St, Tallahassee, Florida 32310-6046, United States
| | - Xiaobing Zuo
- X-ray Science Division, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, Illinois 60439, United States
| | - Patrick Ortmann
- Department of Chemistry, University of Konstanz, Universitätsstraße 10, 78457 Konstanz, Germany
| | - Stefan Mecking
- Department of Chemistry, University of Konstanz, Universitätsstraße 10, 78457 Konstanz, Germany
| | - Rufina G. Alamo
- Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer St, Tallahassee, Florida 32310-6046, United States
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8
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Herndon JW. The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2017. Coord Chem Rev 2018. [DOI: 10.1016/j.ccr.2018.08.007] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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9
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Structure formation in nanophase-separated systems with lamellar morphology: Comb-like vs. linear precision polymers. Eur Polym J 2018. [DOI: 10.1016/j.eurpolymj.2018.03.041] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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10
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Lacombe J, Pearson S, Pirolt F, Norsic S, D’Agosto F, Boisson C, Soulié-Ziakovic C. Structural and Mechanical Properties of Supramolecular Polyethylenes. Macromolecules 2018. [DOI: 10.1021/acs.macromol.8b00270] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Jérémie Lacombe
- Laboratoire Matière Molle et Chimie, UMR 7167 CNRS-ESPCI Paris, Ecole Supérieure de Physique et de Chimie Industrielles de la Ville de Paris, PSL Research University, 10 rue Vauquelin 75005 Paris, France
| | - Samuel Pearson
- Laboratoire Chimie, Catalyse, Polymères et Procédés (C2P2), Equipe LCPP Bat 308F, Université de Lyon, Université Lyon 1, CPE Lyon, CNRS UMR 5265, 43 Boulevard du 11 Novembre 1918, F-69616 Villeurbanne, France
| | - Franz Pirolt
- Institute for Chemistry and Technology of Materials (ICTM), Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Sébastien Norsic
- Laboratoire Chimie, Catalyse, Polymères et Procédés (C2P2), Equipe LCPP Bat 308F, Université de Lyon, Université Lyon 1, CPE Lyon, CNRS UMR 5265, 43 Boulevard du 11 Novembre 1918, F-69616 Villeurbanne, France
| | - Franck D’Agosto
- Laboratoire Chimie, Catalyse, Polymères et Procédés (C2P2), Equipe LCPP Bat 308F, Université de Lyon, Université Lyon 1, CPE Lyon, CNRS UMR 5265, 43 Boulevard du 11 Novembre 1918, F-69616 Villeurbanne, France
| | - Christophe Boisson
- Laboratoire Chimie, Catalyse, Polymères et Procédés (C2P2), Equipe LCPP Bat 308F, Université de Lyon, Université Lyon 1, CPE Lyon, CNRS UMR 5265, 43 Boulevard du 11 Novembre 1918, F-69616 Villeurbanne, France
| | - Corinne Soulié-Ziakovic
- Laboratoire Matière Molle et Chimie, UMR 7167 CNRS-ESPCI Paris, Ecole Supérieure de Physique et de Chimie Industrielles de la Ville de Paris, PSL Research University, 10 rue Vauquelin 75005 Paris, France
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11
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Zhang X, Santonja-Blasco L, Wagener KB, Boz E, Tasaki M, Tashiro K, Alamo RG. Infrared Spectroscopy and X-ray Diffraction Characterization of Dimorphic Crystalline Structures of Polyethylenes with Halogens Placed at Equal Distance along the Backbone. J Phys Chem B 2017; 121:10166-10179. [DOI: 10.1021/acs.jpcb.7b08877] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xiaoshi Zhang
- Department
of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer St, Tallahassee, Florida 32310-6046, United States
| | - Laura Santonja-Blasco
- Department
of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer St, Tallahassee, Florida 32310-6046, United States
| | - Kenneth B. Wagener
- The
George and Josephine Butler Polymer Research Laboratory, Department
of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Emine Boz
- The
George and Josephine Butler Polymer Research Laboratory, Department
of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Masafumi Tasaki
- Department
of Future Industry-Oriented Basic Science and Materials, Graduate
School of Engineering, Toyota Technological Institute, Tempaku, Nagoya 468-8511, Japan
| | - Kohji Tashiro
- Department
of Future Industry-Oriented Basic Science and Materials, Graduate
School of Engineering, Toyota Technological Institute, Tempaku, Nagoya 468-8511, Japan
| | - Rufina G. Alamo
- Department
of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, 2525 Pottsdamer St, Tallahassee, Florida 32310-6046, United States
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12
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Freudenberg J, Poppe S, Binder WH. Precision polymers containing main-chain-amino acids: ADMET polymerization and crystallization. RSC Adv 2017. [DOI: 10.1039/c7ra10485e] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
New PE-type precision oligomers displaying different amino acids (chiral/achiral, polar/non-polar) placed at every 19th carbon atom are presented.
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Affiliation(s)
- Jan Freudenberg
- Martin Luther University Halle-Wittenberg
- Faculty of Natural Sciences II
- Chair of Macromolecular Chemistry
- D-06120 Halle
- Germany
| | - Silvio Poppe
- Martin Luther University Halle-Wittenberg
- Faculty of Natural Sciences II
- Chair of Organic Chemistry
- D-06120 Halle
- Germany
| | - Wolfgang H. Binder
- Martin Luther University Halle-Wittenberg
- Faculty of Natural Sciences II
- Chair of Macromolecular Chemistry
- D-06120 Halle
- Germany
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