Study of the long-distance migration of small brown planthoppers Laodelphax striatellus in China using next-generation sequencing

Comigration and interactions between two species of rice planthopper (Laodelphax striatellus and Sogatella furcifera) and natural enemies in eastern Asia

BACKGROUND

Natural enemies are important in pest control. However, control by natural enemies is hindered by the migration of rice planthoppers. Therefore, comigration and interactions between Laodelphax striatellus (Fallén) and Sogatella furcifera (Horváth) and five predator species, Chrysoperla sinica Tjeder, Harmonia axyridis (Pallas), Episyrphus balteatus, Syrphus corollae (Fab.) and Chrysopa pallens (Rambur) in eastern Asia were investigated.

RESULTS

From 2012 to 2021, the migration patterns of two rice planthoppers and five natural enemy species were monitored by suction trapping on Beihuang Island, Shandong Province, China. Both planthoppers and the five natural enemies regularly comigrated from late April to late October each year. There were significant interannual and seasonal differences in the numbers of two rice planthoppers migrating across this island. Simulated seasonal migration trajectories indicated different source areas for the two rice planthoppers, which mainly originated in northeast, north and east China. The biomass of planthoppers was significantly positively correlated with that of the ladybug H. axyridis in all migration periods, and significant differences in the ratio of rice planthoppers to natural enemies among months. A time-lag effect between seasons was obtained when natural enemies and pests comigrated.

CONCLUSION

Migration was coordinated between rice planthoppers and natural enemies in East Asia. When natural enemies and rice planthoppers comigrated, time lags between seasons were observed. The unique insights into the migration patterns will help to increase understanding of the occurrence of rice planthoppers in eastern Asia and provide an important theoretical basis for regional monitoring and management of rice planthoppers. © 2023 Society of Chemical Industry.

Genome-wide SNPs reveal the fine-scale population structure of Laodelphax striatellus in China using double-digest restriction site-associated DNA sequencing

The small brown planthopper (SBPH), Laodelphax striatellus (Fallén) is one of the most destructive rice pests and has caused serious economic losses in China. To clarify the genetic differentiation and population genetic structure of this insect pest, we investigated the genomic polymorphisms, genetic differentiation, and phylogeography of 31 SBPH populations from 28 sampling sites from three climatic zones of China using double-digest restriction site-associated DNA sequencing (ddRADseq). In total, 2,813,221,369 high-quality paired-end reads from 306 individuals and 1925 single nucleotide polymorphisms (SNPs) were obtained. Low levels of genetic diversity and significant genetic differentiation were observed among the SBPH populations, and three genetic clusters were detected in China. Neutrality tests and bottleneck analysis provided strong evidence for recent rapid expansion with a severe bottleneck in most populations. Our work provides new insights into the genetics of the SBPH and will contribute to the development of effective management strategies for this pest.

Mitochondrial DNA diversity and population structure of Laodelphax striatellus across a broad geographic area in China

The small brown planthopper (SBPH), Laodelphax striatellus Fallén (Hemiptera: Delphacidae), is a crucial devastating rice pest in East Asia. To effectively control this pest, we investigate the genetic diversity, genetic differentiation and genetic structure of 49 populations in China based on a 596 bp fragment of the mitochondrial DNA cytochrome c oxidase subunit I (mtDNA COI) gene. Overall, 83 haplotypes were detected in 1253 mtDNA COI sequences. High levels of genetic variability (Hd = 0.756 ± 0.009, π = 0.00416 ± 0.00011) and genetic differentiation (F _ST = 0.262, p < .001) were observed. Bayesian inference phylogenetic and median-joining haplotype network analyses indicated no obvious geographical distribution pattern among haplotypes. Hierarchical AMOVA and SAMOVA revealed no genetically distinct groups and lack of obvious phylogeographic structure. Isolation by distance (IBD) analysis results demonstrated no correlation between genetic differentiation and geographic distance. Finally, the demographic history of SBPH examined by neutrality tests and mismatch distribution analyses illustrated a sudden population expansion at the large spatial scale in China.

Molecular Analysis of Evolution and Origins of Cultivated Hawthorn (Crataegus spp.) and Related Species in China

Hawthorn is of high economic value owing to its medicinal properties and health benefits. Crataegus is a member of the Rosaceae family; the genus has a complicated taxonomic history, and several theories on its origin have been proposed. In this study, 53 accessions from seven Crataegus taxa native to China and accessions of exotic Crataegus species (two from Europe and one from North America) were analyzed by specific locus amplified fragment sequencing (SLAF-seq). In total, 933,450 single-nucleotide polymorphisms were identified after filtering and used to investigate the species' genomic evolution. Phylogenetic trees derived from nuclear simple sequence repeats (SSRs) and SLAF-seq data showed the same topology, in which Crataegus maximowiczii and Crataegus sanguineae formed a closely related cluster that was clearly separated from the cluster composed of Crataegus hupehensis, Crataegus pinnatifida, Crataegus pinnatifida var. major, Crataegus bretschneideri and Crataegus scabrifolia. Phylogenetic and structure analysis indicated that the seven Chinese Crataegus taxa had two separate speciation events. Plants that evolved the southwestern route shared the genepool with the European species, whereas plants along the northeastern route shared the genepool with the North American species. TreeMix genetic analysis revealed that C. bretschneideri may have a hybrid origin. This study provides valuable information on the origins of Chinese Crataegus and suggests an evolutionary model for the main Crataegus species that native to China.