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Roy S, Acosta JAM, Karak M, Ramirez-Velez I, Torikai K, Ren D, Barbosa LCA. Effects of Synthetic Tetronamides and Methylated Denigrins on Bacterial Quorum Sensing and Biofilm Formation. ACS OMEGA 2023; 8:37798-37807. [PMID: 37867724 PMCID: PMC10586261 DOI: 10.1021/acsomega.3c01729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Accepted: 09/15/2023] [Indexed: 10/24/2023]
Abstract
Detrimental biofilms of bacterial pathogens cause chronic infections with a high-level tolerance to antibiotics. To identify new control agents, we synthesized and tested a total of 14 tetronamides (including 5 new compounds) and 6 denigrin intermediates on the model species Escherichia coli. At a concentration of 50 μg/mL, two tetronamides and two methylated denigrins exhibited significant inhibitory effects against biofilm formation of E. coli RP437, e.g., by 60 and 94%, respectively. Structural analysis of the tested compounds revealed that p-methoxybenzylidene and p-methoxyphenethyl moieties of denigrins are important for biofilm inhibition, while the former group is also essential to the activity against quorum sensing (QS) via AI-2. Specifically, tetramethyldenigrin B has strong inhibitory effects against both E. coli biofilm formation and AI-2-mediated QS and thus provides a promising lead structure for designing better control agents. Consistently, tetramethyldenigrin B also showed inhibitory activity against biofilm formation of uropathogenic E. coli. Together, these findings provide new insights for the rational design of novel biofilm and QS inhibitors.
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Affiliation(s)
- Sweta Roy
- Department
of Biomedical and Chemical Engineering, Syracuse University, Syracuse, New York 13244, United States
| | - Jaime A. M. Acosta
- Department
of Chemistry, Universidade Federal de Minas
Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, Belo Horizonte, MG CEP 31270-901, Brazil
- Chemical
Technology School, Universidad Tecnológica
de Pereira, Carrera 27
#10-02, Barrio Álamos, Risaralda, Pereira Código postal 660003, Colombia
| | - Milandip Karak
- Department
of Chemistry, Universidade Federal de Minas
Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, Belo Horizonte, MG CEP 31270-901, Brazil
- Department
of Chemistry, Faculty of Science, Kyushu
University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Isabela Ramirez-Velez
- Department
of Biomedical and Chemical Engineering, Syracuse University, Syracuse, New York 13244, United States
| | - Kohei Torikai
- Department
of Chemistry, Faculty of Science, Kyushu
University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
- Faculty
of Chemistry, National University of Uzbekistan
named after Mirzo Ulugbek, 4 University Str., Tashkent 100174, Uzbekistan
| | - Dacheng Ren
- Department
of Biomedical and Chemical Engineering and Civil and Environmental
Engineering and Biology, Syracuse University, Syracuse, New York 13244, United States
| | - Luiz C. A. Barbosa
- Department
of Chemistry, Universidade Federal de Minas
Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, Belo Horizonte, MG CEP 31270-901, Brazil
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Soares LTXMG, Basso MAF, Dos Santos CMR, Ali A, Vasconcelos LG, Dall'Oglio EL, Sampaio OM, Vieira LCC. Binding Properties of Photosynthetic Herbicides: Photosynthetic Activity and Molecular Docking Approach towards 1,4-Dihydropyridines Derivatives. Chem Biodivers 2022; 19:e202200586. [PMID: 36383100 DOI: 10.1002/cbdv.202200586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Revised: 11/14/2022] [Accepted: 11/15/2022] [Indexed: 11/17/2022]
Abstract
In the current work, we describe the synthesis of 1,4-dihydropyridine (1,4-DHP) derivatives via Hantzsch multicomponent reaction and their evaluation as photosystem II (PSII) inhibitors through chlorophyll a fluorescence bioassay. Among all the compounds tested, 1,1'-(2,4,6-trimethyl-1,4-dihydropyridine-3,5-diyl)bis(ethan-1-one) (4b) showed best results, reducing the parameters performance index on absorption basis (PIabs ) and electron transport per reaction center by 61 % and 49 %, respectively, as compared to the control. These results indicate the inhibitory activity of PSII over the electron transport chain. Additionally, a molecular docking approach using the protein D1 (PDB code 4V82) was performed in order to assess the structure-activity relationship among the 1,4-DHP derivatives over the PSII, which revealed that both, size of the group at position 4 and the carbonyl groups at the dihydropyridine ring are important for the ligand's interaction, particularly for the hydrogen-bonding interaction with the residues His215, Ser264, and Phe265. Thus, the optimization of these molecular features is the aim of our research group to extend the knowledge of PSII electron chain inhibitors and the establishment of new potent bioactive molecular scaffolds.
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Affiliation(s)
- Luís T X M G Soares
- Department of Chemistry, Federal University of Mato Grosso, Cuiabá-MT, 78060-900, Brazil
| | - Marcelo A F Basso
- Department of Chemistry, Federal University of Mato Grosso, Cuiabá-MT, 78060-900, Brazil
| | - Clarice M R Dos Santos
- Engineering Faculty, Federal University of Mato Grosso, Várzea Grande-MT, 78060-900, Brazil
| | - Akbar Ali
- Department of Chemistry, Government College University, Faisalabad, 38000, Pakistan
| | - Leonardo G Vasconcelos
- Department of Chemistry, Federal University of Mato Grosso, Cuiabá-MT, 78060-900, Brazil
| | - Evandro L Dall'Oglio
- Department of Chemistry, Federal University of Mato Grosso, Cuiabá-MT, 78060-900, Brazil
| | - Olívia M Sampaio
- Department of Chemistry, Federal University of Mato Grosso, Cuiabá-MT, 78060-900, Brazil
| | - Lucas C C Vieira
- Department of Chemistry, Federal University of Mato Grosso, Cuiabá-MT, 78060-900, Brazil
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Silva JG, de Miranda AS, Ismail FMD, Barbosa LCA. Synthesis and medicinal chemistry of tetronamides: Promising agrochemicals and antitumoral compounds. Bioorg Med Chem 2022; 67:116815. [PMID: 35598527 DOI: 10.1016/j.bmc.2022.116815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 05/06/2022] [Accepted: 05/09/2022] [Indexed: 11/30/2022]
Abstract
Butenolides and tetronic acids occupy a prominent position in synthetic chemistry due to their ubiquitous distribution in nature. This has stimulated investigations firstly in the synthesis of such systems and, laterly, the interest has turned to the understanding of the quantum structure of such systems, allowing a deeper understanding of the mechanism and reactivity of this cyclic scaffold. In contrast, tetronamides, which consist of compounds bearing a 4-aminofuran-2(5H)-one backbone, are relatively rare in nature and synthetic routes to such compounds are poorly explored. This review highlights both the importance of the tetronamide scaffold in medicinal chemistry and the most relevant recondite synthetic strategies for obtaining compounds of this class.
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Affiliation(s)
- Júnio G Silva
- Department of Chemistry, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, CEP 31270-901 Belo Horizonte, MG, Brazil
| | - Amanda S de Miranda
- Department of Chemistry, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, CEP 31270-901 Belo Horizonte, MG, Brazil
| | - Fyaz M D Ismail
- Centre for Natural Product Discovery (CNPD), School of Pharmacy & Biomolecular Sciences, Byrom Street, Liverpool John Moores University, Liverpool L3 3AF, UK
| | - Luiz C A Barbosa
- Department of Chemistry, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, CEP 31270-901 Belo Horizonte, MG, Brazil.
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Zhang Q, Li Y, Xu L, Ma H, Li X, Wang M. Synthesis and Fungicidal Activity of Novel Butenolide Compounds Containing Oxime Ether Moiety. CHINESE J ORG CHEM 2022. [DOI: 10.6023/cjoc202203033] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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