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Bowles M, Proulx C. Solid phase submonomer azapeptide synthesis. Methods Enzymol 2021; 656:169-190. [PMID: 34325786 DOI: 10.1016/bs.mie.2021.04.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
Azapeptides contain at least one aza-amino acid, where the α-carbon has been replaced by a nitrogen atom, and have found broad applicability in fields ranging from medicinal chemistry to biomaterials. In this chapter, we provide a step-by-step protocol for the solid phase submonomer synthesis of azapeptides, which includes three steps: (1) hydrazone activation and coupling onto a resin-bound peptide, (2) chemoselective semicarbazone functionalization for installation of the aza-amino acid side chain, and (3) orthogonal deprotection of the semicarbazone to complete the monomer addition cycle. We focus on semicarbazone functionalization by N-alkylation with primary alkyl halides, and describe conditions for coupling onto aza-amino acids. Such divergent methods accelerate the synthesis of peptidomimetics and allow the rapid introduction of a wide variety of natural and unnatural side chains directly on solid support using easily accessible submonomers.
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Affiliation(s)
- Maxwell Bowles
- Department of Chemistry, North Carolina State University, Raleigh, NC, United States
| | - Caroline Proulx
- Department of Chemistry, North Carolina State University, Raleigh, NC, United States.
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2
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Miyata K, Narita A, Fujisawa R, Roppongi M, Ito S, Shingo T, Oba T. Synthesis of boronophenylalanine-like aza-amino acids for boron-containing azapeptide precursors. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.152585] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Ahsanullah, Chingle R, Ohm RG, Chauhan PS, Lubell WD. Aza‐propargylglycine installation by aza‐amino acylation: Synthesis and Ala‐scan of an azacyclopeptide CD36 modulator. Pept Sci (Hoboken) 2018. [DOI: 10.1002/pep2.24102] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Ahsanullah
- Département de ChimieUniversité de Montréal Montréal Québec Canada
| | - Ramesh Chingle
- Département de ChimieUniversité de Montréal Montréal Québec Canada
| | - Ragnhild G. Ohm
- Département de ChimieUniversité de Montréal Montréal Québec Canada
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Chignen Possi K, Mulumba M, Omri S, Garcia-Ramos Y, Tahiri H, Chemtob S, Ong H, Lubell WD. Influences of Histidine-1 and Azaphenylalanine-4 on the Affinity, Anti-inflammatory, and Antiangiogenic Activities of Azapeptide Cluster of Differentiation 36 Receptor Modulators. J Med Chem 2017; 60:9263-9274. [DOI: 10.1021/acs.jmedchem.7b01209] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Kelvine Chignen Possi
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Mukandila Mulumba
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Samy Omri
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Yesica Garcia-Ramos
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Houda Tahiri
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Sylvain Chemtob
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Huy Ong
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - William D. Lubell
- Département
de Chimie, ‡Département de Pédiatrie, and §Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale, Centre-Ville, Montréal, Québec H3C 3J7, Canada
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Chingle R, Proulx C, Lubell WD. Azapeptide Synthesis Methods for Expanding Side-Chain Diversity for Biomedical Applications. Acc Chem Res 2017; 50:1541-1556. [PMID: 28598597 DOI: 10.1021/acs.accounts.7b00114] [Citation(s) in RCA: 77] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Mimicry of bioactive conformations is critical for peptide-based medicinal chemistry because such peptidomimetics may augment stability, enhance affinity, and increase specificity. Azapeptides are peptidomimetics in which the α-carbon(s) of one or more amino acid residues are substituted by nitrogen. The resulting semicarbazide analogues have been shown to reinforce β-turn conformation through the combination of lone pair-lone pair repulsion of the adjacent hydrazine nitrogen and urea planarity. Substitution of a semicarbazide for an amino amide residue in a peptide may retain biological activity and add benefits such as improved metabolic stability. The applications of azapeptides include receptor ligands, enzyme inhibitors, prodrugs, probes, and imaging agents. Moreover, azapeptides have proven therapeutic utility. For example, the aza-glycinamide analogue of the luteinizing hormone-releasing hormone analogue Zoladex is a potent long-acting agonist currently used in the clinic for the treatment of prostate and breast cancer. However, the use of azapeptides was hampered by tedious solution-phase synthetic routes for selective hydrazine functionalization. A remarkable stride to overcome this bottleneck was made in 2009 through the introduction of the submonomer procedure for azapeptide synthesis, which enabled addition of diverse side chains onto a common semicarbazone intermediate, providing a means to construct azapeptide libraries by solution- and solid-phase chemistry. In brief, aza residues are introduced into the peptide chain using the submonomer strategy by semicarbazone incorporation, deprotonation, N-alkylation, and orthogonal deprotection. Amino acylation of the resulting semicarbazide and elongation gives the desired azapeptide. Since the initial report, a number of chemical transformations have taken advantage of the orthogonal chemistry of semicarbazone residues (e.g., Michael additions and N-arylations). In addition, libraries have been synthesized from libraries by diversification of aza-propargylglycine (e.g., A3 coupling reactions, [1,3]-dipolar cycloadditions, and 5-exo-dig cyclizations) and aza-chloroalkylglycine residues. In addition, oxidation of aza-glycine residues has afforded azopeptides that react in pericyclic reactions (e.g., Diels-Alder and Alder-ene chemistry). The bulk of these transformations of aza-glycine residues have been developed by the Lubell laboratory, which has applied such chemistry in the synthesis of ligands with promising biological activity for treating diseases such as cancer and age-related macular degeneration. Azapeptide analogues of growth hormone-releasing peptide-6 (His-d-Trp-Ala-Trp-d-Phe-Lys-NH2, GHRP-6) have for example been pursued as ligands of the cluster of differentiation 36 receptor (CD36) and show promising activity for the development of treatments for angiogenesis-related diseases, such as age-related macular degeneration, as well as for atherosclerosis. Azapeptides have also been employed to make a series of conformationally constrained second mitochondria-derived activator of caspase (Smac) mimetics that exhibit promising apoptosis-inducing activity in cancer cells. The synthesis of cyclic azapeptide derivatives was used to make an aza scan to study the conformation-activity relationships of the anticancer agent cilengitide, cyclo(RGDf-N(Me)V), and its parent counterpart cyclo(RGDfV), which exhibit potency against human tumor metastasis and tumor-induced angiogenesis. Innovations in the synthesis and application of azapeptides will be presented in this Account, focusing on the creation and use of side-chain diversity in medicinal chemistry.
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Affiliation(s)
- Ramesh Chingle
- Department of Chemistry, Université de Montréal, C. P. 6128, Succursale Centre-Ville, Montreal, Quebec, Canada H3C 3J7
| | - Caroline Proulx
- Department of Chemistry, Université de Montréal, C. P. 6128, Succursale Centre-Ville, Montreal, Quebec, Canada H3C 3J7
| | - William D. Lubell
- Department of Chemistry, Université de Montréal, C. P. 6128, Succursale Centre-Ville, Montreal, Quebec, Canada H3C 3J7
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McKinnie SMK, Wang W, Fischer C, McDonald T, Kalin KR, Iturrioz X, Llorens-Cortes C, Oudit GY, Vederas JC. Synthetic Modification within the “RPRL” Region of Apelin Peptides: Impact on Cardiovascular Activity and Stability to Neprilysin and Plasma Degradation. J Med Chem 2017; 60:6408-6427. [DOI: 10.1021/acs.jmedchem.7b00723] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Shaun M. K. McKinnie
- Department of Chemistry, University of Alberta, 11227 Saskatchewan Drive NW, Edmonton, Alberta T6G 2G2, Canada
| | - Wang Wang
- Department of Medicine, University of Alberta, 8440-112 Street NW, Edmonton, Alberta T6G 2B7, Canada
- Mazankowski Alberta Heart Institute, University of Alberta, 8440-112 Street NW, Edmonton, Alberta T6G 2B7, Canada
| | - Conrad Fischer
- Department of Chemistry, University of Alberta, 11227 Saskatchewan Drive NW, Edmonton, Alberta T6G 2G2, Canada
| | - Tyler McDonald
- Department of Chemistry, University of Alberta, 11227 Saskatchewan Drive NW, Edmonton, Alberta T6G 2G2, Canada
| | - Kevin R. Kalin
- Department of Chemistry, University of Alberta, 11227 Saskatchewan Drive NW, Edmonton, Alberta T6G 2G2, Canada
| | - Xavier Iturrioz
- Laboratory of Central Neuropeptides in the Regulation of Body Fluid Homeostasis and Cardiovascular Functions, INSERM, U1050, Paris, F-75005, France
- Center for Interdisciplinary Research in Biology (CIRB), College de France, Paris, F-75005, France
- CNRS, UMR 7241, Paris, F-75005, France
| | - Catherine Llorens-Cortes
- Laboratory of Central Neuropeptides in the Regulation of Body Fluid Homeostasis and Cardiovascular Functions, INSERM, U1050, Paris, F-75005, France
- Center for Interdisciplinary Research in Biology (CIRB), College de France, Paris, F-75005, France
- CNRS, UMR 7241, Paris, F-75005, France
| | - Gavin Y. Oudit
- Department of Medicine, University of Alberta, 8440-112 Street NW, Edmonton, Alberta T6G 2B7, Canada
- Mazankowski Alberta Heart Institute, University of Alberta, 8440-112 Street NW, Edmonton, Alberta T6G 2B7, Canada
| | - John C. Vederas
- Department of Chemistry, University of Alberta, 11227 Saskatchewan Drive NW, Edmonton, Alberta T6G 2G2, Canada
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Zhang J, Mulumba M, Ong H, Lubell WD. Diversity-Oriented Synthesis of Cyclic Azapeptides by A3-Macrocyclization Provides High-Affinity CD36-Modulating Peptidomimetics. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611685] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Jinqiang Zhang
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
- Present address: School of Pharmaceutical Science; Chongqing University; Chongqing 401331 China
| | - Mukandila Mulumba
- Faculté de Pharmacie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
| | - Huy Ong
- Faculté de Pharmacie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
| | - William D. Lubell
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
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Zhang J, Mulumba M, Ong H, Lubell WD. Diversity-Oriented Synthesis of Cyclic Azapeptides by A 3 -Macrocyclization Provides High-Affinity CD36-Modulating Peptidomimetics. Angew Chem Int Ed Engl 2017; 56:6284-6288. [PMID: 28090719 DOI: 10.1002/anie.201611685] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 12/14/2016] [Indexed: 11/11/2022]
Abstract
Macrocyclization has enabled the use of peptides in drug discovery creating a need for methods to synthesize diverse peptide macrocycles. Azapeptides have advanced to clinically used drugs, however, few cyclic azapeptides have been studied. A multiple component "A3 -macrocyclization" strategy is described for the preparation of diverse cyclic azapeptides and is demonstrated by the synthesis of 15 growth hormone releasing hormone-6 (GHRP-6) analogs. Certain cyclic aza-GHRP-6 analogs exhibited unprecedented affinity for the CD36 receptor, and capacity to modulate Toll-like receptor agonist-induced overproduction of nitric oxide, and reduce pro-inflammatory cytokine and chemokine production in macrophages.
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Affiliation(s)
- Jinqiang Zhang
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, H3C 3J7, Canada.,Present address: School of Pharmaceutical Science, Chongqing University, Chongqing, 401331, China
| | - Mukandila Mulumba
- Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, H3C 3J7, Canada
| | - Huy Ong
- Faculté de Pharmacie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, H3C 3J7, Canada
| | - William D Lubell
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, H3C 3J7, Canada
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St-Cyr DJ, García-Ramos Y, Doan ND, Lubell WD. Aminolactam, N-Aminoimidazolone, and N-Aminoimdazolidinone Peptide Mimics. TOPICS IN HETEROCYCLIC CHEMISTRY 2017. [DOI: 10.1007/7081_2017_204] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Affiliation(s)
- Ramesh Chingle
- Département de Chimie, Université de Montréal, C.P.
6128, Succursale Centre-Ville, Montréal, Québec Canada H3C 3J7
| | - William D. Lubell
- Département de Chimie, Université de Montréal, C.P.
6128, Succursale Centre-Ville, Montréal, Québec Canada H3C 3J7
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Doan ND, Zhang J, Traoré M, Kamdem W, Lubell WD. Solid-phase synthesis of C-terminal azapeptides. J Pept Sci 2014; 21:387-91. [DOI: 10.1002/psc.2711] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2014] [Revised: 10/04/2014] [Accepted: 10/13/2014] [Indexed: 12/21/2022]
Affiliation(s)
- Ngoc-Duc Doan
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
| | - Jinqiang Zhang
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
| | - Mariam Traoré
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
| | - Winnie Kamdem
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
| | - William D. Lubell
- Département de Chimie; Université de Montréal; C.P. 6128, Succursale Centre-Ville Montréal Québec H3C 3J7 Canada
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Traoré M, Doan ND, Lubell WD. Diversity-Oriented Synthesis of Azapeptides with Basic Amino Acid Residues: Aza-Lysine, Aza-Ornithine, and Aza-Arginine. Org Lett 2014; 16:3588-91. [DOI: 10.1021/ol501586y] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Mariam Traoré
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, Canada H3C 3J7
| | - Ngoc-Duc Doan
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, Canada H3C 3J7
| | - William D. Lubell
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec, Canada H3C 3J7
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13
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Affiliation(s)
- Ngoc-Duc Doan
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec Canada H3C 3J7
| | - Robert Hopewell
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec Canada H3C 3J7
| | - William D. Lubell
- Département de Chimie, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec Canada H3C 3J7
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Zhang J, Proulx C, Tomberg A, Lubell WD. Multicomponent Diversity-Oriented Synthesis of Aza-Lysine-Peptide Mimics. Org Lett 2013; 16:298-301. [DOI: 10.1021/ol403297v] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Jinqiang Zhang
- Département de Chimie, Université de Montréal, C.P.
6128, Succursale Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Caroline Proulx
- Département de Chimie, Université de Montréal, C.P.
6128, Succursale Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Anna Tomberg
- Département de Chimie, Université de Montréal, C.P.
6128, Succursale Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - William D. Lubell
- Département de Chimie, Université de Montréal, C.P.
6128, Succursale Centre-Ville, Montréal, Québec H3C 3J7, Canada
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