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Susa AC, Xia Z, Tang HYH, Tainer JA, Williams ER. Charging of Proteins in Native Mass Spectrometry. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2017; 28:332-340. [PMID: 27734326 PMCID: PMC5283922 DOI: 10.1007/s13361-016-1517-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2016] [Revised: 09/22/2016] [Accepted: 09/27/2016] [Indexed: 05/19/2023]
Abstract
Factors that influence the charging of protein ions formed by electrospray ionization from aqueous solutions in which proteins have native structures and function were investigated. Protein ions ranging in molecular weight from 12.3 to 79.7 kDa and pI values from 5.4 to 9.6 were formed from different solutions and reacted with volatile bases of gas-phase basicities higher than that of ammonia in the cell of a Fourier-transform ion cyclotron resonance mass spectrometer. The charge-state distribution of cytochrome c ions formed from aqueous ammonium or potassium acetate is the same. Moreover, ions formed from these two solutions do not undergo proton transfer to 2-fluoropyridine, which is 8 kcal/mol more basic than ammonia. These results provide compelling evidence that proton transfer between ammonia and protein ions does not limit protein ion charge in native electrospray ionization. Both circular dichroism and ion mobility measurements indicate that there are differences in conformations of proteins in pure water and aqueous ammonium acetate, and these differences can account for the difference in the extent of charging and proton-transfer reactivities of protein ions formed from these solutions. The extent of proton transfer of the protein ions with higher gas-phase basicity bases trends with how closely the protein ions are charged to the value predicted by the Rayleigh limit for spherical water droplets approximately the same size as the proteins. These results indicate that droplet charge limits protein ion charge in native mass spectrometry and are consistent with these ions being formed by the charged residue mechanism. Graphical Abstract ᅟ.
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Affiliation(s)
- Anna C Susa
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA
| | - Zijie Xia
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA
| | - Henry Y H Tang
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - John A Tainer
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
- Department of Molecular and Cellular Oncology, The University of Texas M. D. Anderson Cancer Center, Houston, TX, 77030, USA
| | - Evan R Williams
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA.
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Susa AC, Mortensen DN, Williams ER. Effects of cations on protein and peptide charging in electrospray ionization from aqueous solutions. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2014; 25:918-27. [PMID: 24729190 PMCID: PMC4051497 DOI: 10.1007/s13361-014-0864-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Revised: 02/12/2014] [Accepted: 02/18/2014] [Indexed: 05/11/2023]
Abstract
The effects of eight different cations with ionic radii between 69 and 337 pm on the charging of peptides and proteins with electrospray ionization from aqueous acetate salt solutions are reported. Significant adduction occurs for all cations except NH4(+), and the average protein charge is lower when formed from solutions containing salts compared with solutions without salts added. Circular dichroism and ion mobility results show the protein conformations are different in pure water compared with salt solutions, which likely affects the extent of charging. The average charge of protein and peptide ions formed from solutions with Li(+) and Cs(+), which have Gibbs solvation free energies (GSFEs) that differ by 225 kJ/mol, is similar. Lower charge states are typically formed from solutions with tetramethylammonium and tetraethylammonium that have lower GSFE values. Loss of the larger cations that have the lowest GSFEs is facile when adducted protein ions are collisionally activated, resulting in the formation of lower analyte charge states. This reaction pathway provides a route to produce abundant singly protonated protein ions under native mass spectrometry conditions. The average protein and peptide charge with NH4(+) is nearly the same as that with Rb(+) and K(+), cations with similar GSFE and ionic radii. This indicates that proton transfer from NH4(+) to proteins plays an insignificant role in the extent of protein charging in native mass spectrometry.
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Affiliation(s)
| | | | - Evan R. Williams
- Address correspondence to Prof. Evan R. Williams: Department of Chemistry, University of California, Berkeley, B42 Hildebrand Hall Berkeley, CA 94720, Phone: (510) 643-7161,
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Takamizawa A, Mishina K, Hiraoka K. Observation of dimethylaminoethyl methacrylate-myoglobin binding reaction using laser spray mass spectrometry. JOURNAL OF MASS SPECTROMETRY : JMS 2012; 47:221-225. [PMID: 22359332 DOI: 10.1002/jms.2040] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Covalent bonds are often created by a reaction between chemicals and protein before causing various adverse effects in a cell. Dimethylaminoethyl methacrylate (DMAEMA), which has moderate toxicity, causes skin inflammation and throat irritation. For this study, we investigated a reaction mechanism between myoglobin and (DMAEMA) using a new analytical tool developed at our laboratory: laser spray mass spectrometry technique. It was found that initially DMAEMA was added to the amino group of protein by the Michael addition mechanism; the added DMAEMA was hydrolyzed to methacrylic acid using an autocatalytic system. The results of this study indicate the feasibility of the laser spray technique in analyses of reaction dynamics.
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Affiliation(s)
- Atsushi Takamizawa
- PRESTO, Japan Science and Technology Agency, 4-1-8 Honcho Kawaguchi, Saitama 332-0012, Japan.
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Yoshimura K, Chen LC, Asakawa D, Hiraoka K, Takeda S. Physical properties of the probe electrospray ionization (PESI) needle applied to the biological samples. JOURNAL OF MASS SPECTROMETRY : JMS 2009; 44:978-985. [PMID: 19306264 DOI: 10.1002/jms.1576] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Probe electrospray ionization (PESI) is a recently developed technique that uses a fine solid needle as a probe for sampling biological materials. In this study, we quantified the volume of liquid sample picked up by the solid needle with the tip diameter of approximately 700 nm and the apex angle of approximately 60 degrees. The amounts of low-viscosity samples (rat urine) loaded on the tip of the needle by a single stroke were 0.35 +/- 0.09 pl. Interestingly, the amount of liquid adhered to the tip did not significantly depend on the protein concentration, but viscosity and surface tension of the sample. Under these conditions, we successfully obtained mass spectra for each biological sample.
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Affiliation(s)
- Kentaro Yoshimura
- Department of Anatomy and Cell Biology, Interdisciplinary School of Medicine and Engineering, The University of Yamanashi, 1110 Shimo-Kateau, Chuo, Yamanashi 409-3898, Japan
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Li FA, Huang JL, Shen SY, Wang CW, Her GR. Development of a Liquid-Junction/Low-Flow Interface for Phosphate Buffer Capillary Electrophoresis Mass Spectrometry. Anal Chem 2009; 81:2810-4. [DOI: 10.1021/ac802491y] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Fu-An Li
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
| | - Ju-Li Huang
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
| | - Shang-Yu Shen
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
| | - Che-Wei Wang
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
| | - Guor-Rong Her
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
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Takamizawa A, Maeda H, Kambara S, Furuya H, Hiraoka K. Measurement of sugars using the laser spray technique with a gold capillary. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2008; 22:2453-2456. [PMID: 18634124 DOI: 10.1002/rcm.3631] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
A gold (Au) capillary has higher thermal conductivity than a stainless steel capillary and can withstand capillary over-heating induced by high CO(2) laser irradiation (over 2.5 W) better than a stainless steel capillary. For this study, a laser spray using an Au capillary was applied for the detection of sugars. The signal of cationized compounds [M+Na](+) can be detected with higher sensitivity than with conventional laser sprays using high laser power (over 2.7 W). Using 3.5 W of laser power, the signal intensity is 15 times higher than the maximum value with stainless steel (2.3 W) in a 10(-5) M maltose aqueous solution. It is considered that almost all the water molecules evaporate by laser irradiation, which is impossible to achieve using a stainless steel capillary.
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Affiliation(s)
- Atsushi Takamizawa
- Clean Energy Research Center, University of Yamanashi, Takeda-4, Kofu 400-8511, Japan.
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Chien CT, Li FA, Huang JL, Her GR. CE-MS of antihistamines using nonvolatile phosphate buffer. Electrophoresis 2007; 28:1454-60. [PMID: 17427257 DOI: 10.1002/elps.200600542] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Antihistamines were analyzed by CE-ESI-MS using phosphate buffer. The separation was performed in an acidic environment so that phosphate ions had a net velocity flowing toward the inlet reservoir instead of the ESI source. To further reduce the effect of ion suppression, the sodium ion in sodium phosphate was replaced with an ammonium ion. Furthermore, with the combination of reducing the concentration of acid added to the sheath liquid and the use of a low-flow interface, phosphoric acid could be added to the sheath liquid. Because of the use of the same counterion (phosphate ion) in running buffer and in sheath liquid, the separation integrity (resolution, elution order, and peak shape) was preserved. In addition, ion suppression was also greatly alleviated because a minimal amount of phosphate flowed into the ESI source.
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Affiliation(s)
- Chiu-Tang Chien
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
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Shi X, Takamizawa A, Nishimura Y, Hiraoka K, Akashi S. Stability analysis for double-stranded DNA oligomers and their noncovalent complexes with drugs by laser spray. JOURNAL OF MASS SPECTROMETRY : JMS 2006; 41:1086-95. [PMID: 16830356 DOI: 10.1002/jms.1069] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Laser spray, which is a newly developed ionization technique, can characterize the stability of noncovalent complexes in the solution phase. By using this advantage, laser spray has been applied to probe the intrinsic stability of double-stranded DNA (dsDNA) sequences and their binding affinities with various drugs in the solution phase. Systematic experiments were carried out using six 16-mer and three 22-mer dsDNA oligomers, together with the complexes of the 16-mer dsDNA with minor groove binders: berenil, Hoechst 33342, DAPI, and netropsin. Dissociation curves for each dsDNA or each complex were plotted as a function of laser power. The laser power (E50%), where 50% of each dsDNA or each complex was dissociated, was compared with its melting temperature (Tm) determined by UV spectroscopy. Linear correlations between E50% and Tm were obtained not only for the dsDNA oligomers (correlation factor r = 0.9835) but also for the 16-mer dsDNA complexes with minor groove binders (r = 0.9966). In addition, laser spray has successfully clarified the binding affinities of a 16-mer dsDNA with two intercalators: daunomycin and nogalamycin. In the case of the dsDNA-daunomycin complex, by changing the molar ratio of dsDNA : drug from 1 : 1 to 1 : 5, the concentration-dependent stability of the complex was confirmed by laser spray. The present results demonstrate that laser spray mass spectrometry can be a powerful and convenient method to investigate the relative binding affinities of dsDNA-ligand complexes in the solution phase, which could be applied to the early stage of high-throughput screening of drugs targeting for dsDNA.
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Affiliation(s)
- Xiangguo Shi
- International Graduate School of Arts and Sciences, Yokohama City University, Tsurumi-ku, Yokohama Kanagawa 230-0045, Japan
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Takamizawa A, Fujimaki S, Sunner J, Hiraoka K. Denaturation of lysozyme and myoglobin in laser spray. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2005; 16:860-8. [PMID: 15907701 DOI: 10.1016/j.jasms.2005.02.012] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2004] [Revised: 01/28/2005] [Accepted: 02/16/2005] [Indexed: 05/02/2023]
Abstract
In laser spray, the tip of an electrospray capillary is irradiated with a continuous CO(2) laser beam. Here, we report results from a modified laser spray method that employs a relatively low laser irradiance level. With a laser power of approximately 2 W and a focal spot size ( approximately 0.3 mm), which covered the entire front surface of the electrospray capillary, the irradiance was approximately 3 x 10(3) W/cm(2). This resulted in a quiescent and smooth vaporization of aqueous solutions. This "evaporation-mode" laser spray method yielded the best results so far obtained in our laboratory with laser-irradiated electrospray, producing higher and more stable signals. The method was applied to the analysis of aqueous solutions of lysozyme and myoglobin. Mass spectra were obtained as a function of laser power from 0 W (electrospray) to approximately 2 W. The spray generated at the tip of the stainless steel capillary was observed with a CCD camera. With increase of laser power, the droplets in the spray became finer and the Taylor cone became progressively smaller. The strongest ion signals were recorded when the sample solution protruded only slightly from the tip of the capillary. A broadening of the lysozyme charge-state distribution, attributable to protein unfolding, was observed with a laser power of 2 W. No denaturation of myoglobin took place up to a laser power of 1.6 W. However, a sudden onset of denaturation was observed at 1.8 W as a broadening of the myoglobin charge distribution and the appearance of apo-myoglobin peaks. These findings demonstrate that laser spray is capable of dissociating the noncovalent complexes selectively without breaking covalent bonds.
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Affiliation(s)
- Atsushi Takamizawa
- Clean Energy Research Center, University of Yamanashi, Takeda 4-3-11, Kofu 400-8511, Japan
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